RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 ARMCX2Q7L311 632 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 CCDC144CPQ8IYA2 1237 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 ANKS1AQ92625 1134 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 GPCPD1Q9NPB8 672 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 CYP39A1Q9NYL5 469 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 SPTBN5Q9NRC6 3674 aaKnown RBP12.13□□□□□ -0.47
BEST3-208ENST00000547208 RAD50Q92878 1312 aa12.12□□□□□ -0.47
BEST3-208ENST00000547208 SYNRGQ9UMZ2 1314 aa12.12□□□□□ -0.47
BEST3-208ENST00000547208 CHMLP26374 656 aa12.12□□□□□ -0.47
BEST3-208ENST00000547208 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
BEST3-208ENST00000547208 C1orf53Q5VUE5 145 aa12.12□□□□□ -0.47
BEST3-208ENST00000547208 CCSAPQ6IQ19 270 aaPredicted RBP12.12□□□□□ -0.47
BEST3-208ENST00000547208 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
BEST3-208ENST00000547208 KLHDC9Q8NEP7 349 aa12.12□□□□□ -0.47
BEST3-208ENST00000547208 ABHD16BQ9H3Z7 469 aa12.12□□□□□ -0.47
BEST3-208ENST00000547208 ZSWIM5Q9P217 1185 aa12.12□□□□□ -0.47
BEST3-208ENST00000547208 ZHX1Q9UKY1 873 aaPredicted RBP12.12□□□□□ -0.47
BEST3-208ENST00000547208 CCPG1Q9ULG6 757 aa12.12□□□□□ -0.47
BEST3-208ENST00000547208 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
BEST3-208ENST00000547208 MYADML2A6NDP7 307 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 DUSP11O75319 330 aaKnown RBP12.11□□□□□ -0.47
BEST3-208ENST00000547208 IRX5P78411 483 aaPredicted RBP12.11□□□□□ -0.47
BEST3-208ENST00000547208 PTH1RQ03431 593 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 TRIM60Q495X7 471 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 RNF180Q86T96 592 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 ENAHQ8N8S7 591 aaPredicted RBP12.11□□□□□ -0.47
BEST3-208ENST00000547208 CLEC4DQ8WXI8 215 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
BEST3-208ENST00000547208 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
BEST3-208ENST00000547208 MTMR10Q9NXD2 777 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 CTNNA3Q9UI47 895 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 FAM184BQ9ULE4 1060 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 LAMA2P24043 3122 aaKnown RBP12.11□□□□□ -0.47
BEST3-208ENST00000547208 TNKSO95271 1327 aa12.11□□□□□ -0.47
BEST3-208ENST00000547208 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
BEST3-208ENST00000547208 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 NFIBO00712 420 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 CTAGE5O15320 804 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 GOLGA8HP0CJ92 632 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 CST5P28325 142 aaPredicted RBP12.1□□□□□ -0.47
BEST3-208ENST00000547208 NKX3-2P78367 333 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 IQCA1Q86XH1 822 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 PNMA1Q8ND90 353 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 MORC4Q8TE76 937 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 TSEN34Q9BSV6 310 aaKnown RBP12.1□□□□□ -0.47
BEST3-208ENST00000547208 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
BEST3-208ENST00000547208 CPVLQ9H3G5 476 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 ATP11BQ9Y2G3 1177 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 TAF6LQ9Y6J9 622 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 WDR19Q8NEZ3 1342 aa12.1□□□□□ -0.47
BEST3-208ENST00000547208 BAZ2BQ9UIF8 2168 aaKnown RBP12.09□□□□□ -0.47
BEST3-208ENST00000547208 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.09□□□□□ -0.47
BEST3-208ENST00000547208 SGSM2O43147 1006 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 CYP21A2P08686 494 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 ACLYP53396 1101 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 GJA9P57773 515 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
BEST3-208ENST00000547208 SEC23AQ15436 765 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 CCDC178Q5BJE1 867 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 GPATCH4Q5T3I0 446 aaKnown RBP12.09□□□□□ -0.47
BEST3-208ENST00000547208 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 CYB5R4Q7L1T6 521 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 SH3RF1Q7Z6J0 888 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 TDHQ8IZJ6 230 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
BEST3-208ENST00000547208 FAM161BQ96MY7 647 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 KRT23Q9C075 422 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 UBE2OQ9C0C9 1292 aaKnown RBP12.09□□□□□ -0.47
BEST3-208ENST00000547208 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 CNNM2Q9H8M5 875 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 PDLIM7Q9NR12 457 aa12.09□□□□□ -0.47
BEST3-208ENST00000547208 GNEQ9Y223 722 aaKnown RBP12.09□□□□□ -0.47
BEST3-208ENST00000547208 PRUNE2Q8WUY3 3088 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 CDH23Q9H251 3354 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 MYH7BA7E2Y1 1941 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 TRIM43BA6NCK2 446 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 ASB14A6NK59 587 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 PTGS1P23219 599 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 TLE2Q04725 743 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 BAATQ14032 418 aaPredicted RBP12.08□□□□□ -0.48
BEST3-208ENST00000547208 KCNA10Q16322 511 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 LRIT3Q3SXY7 679 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 TMEM63BQ5T3F8 832 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 TAPT1Q6NXT6 567 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 SLC30A10Q6XR72 485 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 TRIM43Q96BQ3 446 aaPredicted RBP12.08□□□□□ -0.48
BEST3-208ENST00000547208 KAT14Q9H8E8 782 aa12.08□□□□□ -0.48
BEST3-208ENST00000547208 MOXD2PA6NHM9 499 aa12.07□□□□□ -0.48
BEST3-208ENST00000547208 C6orf222P0C671 652 aaPredicted RBP12.07□□□□□ -0.48
BEST3-208ENST00000547208 SMPD1P17405 629 aa12.07□□□□□ -0.48
BEST3-208ENST00000547208 ITGB8P26012 769 aa12.07□□□□□ -0.48
BEST3-208ENST00000547208 ALDH5A1P51649 535 aaPredicted RBP12.07□□□□□ -0.48
BEST3-208ENST00000547208 ASPRV1Q53RT3 343 aa12.07□□□□□ -0.48
BEST3-208ENST00000547208 STOX1Q6ZVD7 989 aa12.07□□□□□ -0.48
BEST3-208ENST00000547208 FBXO16Q8IX29 292 aaPredicted RBP12.07□□□□□ -0.48
BEST3-208ENST00000547208 RUFY2Q8WXA3 655 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms