RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 CFAP54Q96N23 3096 aa28.36■■■□□ 2.13
PRDM4-202ENST00000547188 SURF6O75683 361 aaKnown RBP28.35■■■□□ 2.13
PRDM4-202ENST00000547188 SUPT20HL2P0C7V6 817 aa28.35■■■□□ 2.13
PRDM4-202ENST00000547188 PPP1R13LQ8WUF5 828 aa28.35■■■□□ 2.13
PRDM4-202ENST00000547188 HOMER2Q9NSB8 354 aa28.35■■■□□ 2.13
PRDM4-202ENST00000547188 CTDP1Q9Y5B0 961 aaPredicted RBP28.35■■■□□ 2.13
PRDM4-202ENST00000547188 TRIOO75962 3097 aa28.34■■■□□ 2.13
PRDM4-202ENST00000547188 PRKAB2O43741 272 aa28.34■■■□□ 2.13
PRDM4-202ENST00000547188 ST18O60284 1047 aa28.34■■■□□ 2.13
PRDM4-202ENST00000547188 ZBED4O75132 1171 aa28.34■■■□□ 2.13
PRDM4-202ENST00000547188 PDE6AP16499 860 aa28.34■■■□□ 2.13
PRDM4-202ENST00000547188 SLC9C2Q5TAH2 1124 aa28.34■■■□□ 2.13
PRDM4-202ENST00000547188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.34■■■□□ 2.13
PRDM4-202ENST00000547188 PRPF38AQ8NAV1 312 aaKnown RBP28.34■■■□□ 2.13
PRDM4-202ENST00000547188 ATP2A1O14983 1001 aa28.33■■■□□ 2.13
PRDM4-202ENST00000547188 IQCF3P0C7M6 154 aa28.33■■■□□ 2.13
PRDM4-202ENST00000547188 RFC2P35250 354 aa28.33■■■□□ 2.13
PRDM4-202ENST00000547188 POLA2Q14181 598 aa28.33■■■□□ 2.13
PRDM4-202ENST00000547188 TMED8Q6PL24 325 aaPredicted RBP28.33■■■□□ 2.13
PRDM4-202ENST00000547188 EEPD1Q7L9B9 569 aa28.33■■■□□ 2.13
PRDM4-202ENST00000547188 H3BQ06 376 aaPredicted RBP28.32■■■□□ 2.12
PRDM4-202ENST00000547188 PRSS33Q8NF86 280 aa28.32■■■□□ 2.12
PRDM4-202ENST00000547188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.32■■■□□ 2.12
PRDM4-202ENST00000547188 KIFC2Q96AC6 838 aa28.32■■■□□ 2.12
PRDM4-202ENST00000547188 ZBED2Q9BTP6 218 aa28.32■■■□□ 2.12
PRDM4-202ENST00000547188 ARMT1Q9H993 441 aa28.32■■■□□ 2.12
PRDM4-202ENST00000547188 FBXO40Q9UH90 709 aa28.32■■■□□ 2.12
PRDM4-202ENST00000547188 ZNF532Q9HCE3 1301 aa28.32■■■□□ 2.12
PRDM4-202ENST00000547188 SOWAHBA6NEL2 793 aa28.31■■■□□ 2.12
PRDM4-202ENST00000547188 BCAR3O75815 825 aa28.31■■■□□ 2.12
PRDM4-202ENST00000547188 KCNJ6P48051 423 aa28.31■■■□□ 2.12
PRDM4-202ENST00000547188 FAM133AQ8N9E0 248 aa28.31■■■□□ 2.12
PRDM4-202ENST00000547188 CHST13Q8NET6 341 aa28.31■■■□□ 2.12
PRDM4-202ENST00000547188 TNNQ9UQP3 1299 aa28.31■■■□□ 2.12
PRDM4-202ENST00000547188 MYH4Q9Y623 1939 aa28.3■■■□□ 2.12
PRDM4-202ENST00000547188 FBXO16Q8IX29 292 aaPredicted RBP28.3■■■□□ 2.12
PRDM4-202ENST00000547188 RETREG2Q8NC44 543 aa28.3■■■□□ 2.12
PRDM4-202ENST00000547188 MFSD14AQ96MC6 490 aa28.3■■■□□ 2.12
PRDM4-202ENST00000547188 SPTBN4Q9H254 2564 aa28.3■■■□□ 2.12
PRDM4-202ENST00000547188 TECTAO75443 2155 aa28.3■■■□□ 2.12
PRDM4-202ENST00000547188 GREB1LQ9C091 1923 aaPredicted RBP28.3■■■□□ 2.12
PRDM4-202ENST00000547188 RBAK-RBAKDNI3L0D1 243 aa28.29■■■□□ 2.12
PRDM4-202ENST00000547188 NDUFB10O96000 172 aa28.29■■■□□ 2.12
PRDM4-202ENST00000547188 FAM47CQ5HY64 1035 aa28.29■■■□□ 2.12
PRDM4-202ENST00000547188 C12orf60Q5U649 245 aa28.29■■■□□ 2.12
PRDM4-202ENST00000547188 TAPT1Q6NXT6 567 aa28.29■■■□□ 2.12
PRDM4-202ENST00000547188 C16orf86Q6ZW13 317 aa28.29■■■□□ 2.12
PRDM4-202ENST00000547188 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.29■■■□□ 2.12
PRDM4-202ENST00000547188 SLC38A10Q9HBR0 1119 aa28.29■■■□□ 2.12
PRDM4-202ENST00000547188 F5H6K3 240 aa28.28■■■□□ 2.12
PRDM4-202ENST00000547188 WDR5P61964 334 aaKnown RBP28.28■■■□□ 2.12
PRDM4-202ENST00000547188 DEFB103AP81534 67 aa28.28■■■□□ 2.12
PRDM4-202ENST00000547188 ZP2Q05996 745 aa28.28■■■□□ 2.12
PRDM4-202ENST00000547188 KLRC3Q07444 240 aa28.28■■■□□ 2.12
PRDM4-202ENST00000547188 NEK9Q8TD19 979 aa28.28■■■□□ 2.12
PRDM4-202ENST00000547188 ASB14A6NK59 587 aa28.27■■■□□ 2.12
PRDM4-202ENST00000547188 BAIAP3O94812 1187 aa28.27■■■□□ 2.12
PRDM4-202ENST00000547188 ERVK-21P61565 698 aa28.27■■■□□ 2.12
PRDM4-202ENST00000547188 IQSEC1Q6DN90 963 aa28.27■■■□□ 2.12
PRDM4-202ENST00000547188 SSH3Q8TE77 659 aa28.27■■■□□ 2.12
PRDM4-202ENST00000547188 TGS1Q96RS0 853 aaKnown RBP28.27■■■□□ 2.12
PRDM4-202ENST00000547188 SCN10AQ9Y5Y9 1956 aa28.27■■■□□ 2.12
PRDM4-202ENST00000547188 TCRBV5S4A2TA0A5A2 114 aa28.26■■■□□ 2.11
PRDM4-202ENST00000547188 USP17L12C9JPN9 530 aa28.26■■■□□ 2.11
PRDM4-202ENST00000547188 USP17L21D6R901 530 aa28.26■■■□□ 2.11
PRDM4-202ENST00000547188 MYL3P08590 195 aa28.26■■■□□ 2.11
PRDM4-202ENST00000547188 PUS10Q3MIT2 529 aaKnown RBP28.26■■■□□ 2.11
PRDM4-202ENST00000547188 SLFNL1Q499Z3 407 aa28.26■■■□□ 2.11
PRDM4-202ENST00000547188 IER5LQ5T953 404 aa28.26■■■□□ 2.11
PRDM4-202ENST00000547188 A1CFQ9NQ94 594 aaKnown RBP28.26■■■□□ 2.11
PRDM4-202ENST00000547188 Q9Y3F1 56 aa28.26■■■□□ 2.11
PRDM4-202ENST00000547188 LINC01553A4QN01 128 aa28.25■■■□□ 2.11
PRDM4-202ENST00000547188 PITPNM1O00562 1244 aa28.25■■■□□ 2.11
PRDM4-202ENST00000547188 PURAQ00577 322 aaKnown RBP28.25■■■□□ 2.11
PRDM4-202ENST00000547188 ARHGAP45Q92619 1136 aa28.25■■■□□ 2.11
PRDM4-202ENST00000547188 COG6Q9Y2V7 657 aa28.25■■■□□ 2.11
PRDM4-202ENST00000547188 LCTP09848 1927 aa28.24■■■□□ 2.11
PRDM4-202ENST00000547188 ATP8B2P98198 1209 aa28.24■■■□□ 2.11
PRDM4-202ENST00000547188 NBPF20Q3BBV1 942 aa28.24■■■□□ 2.11
PRDM4-202ENST00000547188 EP400NLQ6ZTU2 488 aa28.24■■■□□ 2.11
PRDM4-202ENST00000547188 KIAA1211Q6ZU35 1233 aa28.24■■■□□ 2.11
PRDM4-202ENST00000547188 ACAD9Q9H845 621 aa28.24■■■□□ 2.11
PRDM4-202ENST00000547188 POLR3EQ9NVU0 708 aa28.24■■■□□ 2.11
PRDM4-202ENST00000547188 C5orf42Q9H799 3197 aa28.24■■■□□ 2.11
PRDM4-202ENST00000547188 ZFHX2Q9C0A1 2572 aaPredicted RBP28.24■■■□□ 2.11
PRDM4-202ENST00000547188 C19orf67A6NJJ6 358 aa28.23■■■□□ 2.11
PRDM4-202ENST00000547188 IRS1P35568 1242 aa28.23■■■□□ 2.11
PRDM4-202ENST00000547188 ATP8A2Q9NTI2 1148 aa28.23■■■□□ 2.11
PRDM4-202ENST00000547188 MYO7AQ13402 2215 aa28.22■■■□□ 2.11
PRDM4-202ENST00000547188 MBD4O95243 580 aa28.22■■■□□ 2.11
PRDM4-202ENST00000547188 TTF1Q15361 905 aaPredicted RBP28.22■■■□□ 2.11
PRDM4-202ENST00000547188 FAM117BQ6P1L5 589 aa28.22■■■□□ 2.11
PRDM4-202ENST00000547188 MUTYHQ9UIF7 546 aa28.22■■■□□ 2.11
PRDM4-202ENST00000547188 ANP32CO43423 234 aa28.21■■■□□ 2.11
PRDM4-202ENST00000547188 RARSP54136 660 aaKnown RBP28.21■■■□□ 2.11
PRDM4-202ENST00000547188 PTPN5P54829 565 aa28.21■■■□□ 2.11
PRDM4-202ENST00000547188 AMOTL1Q8IY63 956 aa28.21■■■□□ 2.11
PRDM4-202ENST00000547188 RAD9AQ99638 391 aa28.21■■■□□ 2.11
PRDM4-202ENST00000547188 C17orf80Q9BSJ5 609 aa28.21■■■□□ 2.11
PRDM4-202ENST00000547188 C1orf115Q9H7X2 142 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms