RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 DOCK3Q8IZD9 2030 aa29.53■■■□□ 2.32
NKX2-1-205ENST00000546983 PRKAR2AP13861 404 aaKnown RBP29.52■■■□□ 2.32
NKX2-1-205ENST00000546983 QRICH1Q2TAL8 776 aa29.52■■■□□ 2.32
NKX2-1-205ENST00000546983 RRP36Q96EU6 259 aaKnown RBP29.52■■■□□ 2.32
NKX2-1-205ENST00000546983 LRRC2Q9BYS8 371 aa29.52■■■□□ 2.32
NKX2-1-205ENST00000546983 AGXT2Q9BYV1 514 aa29.52■■■□□ 2.32
NKX2-1-205ENST00000546983 VAT1LQ9HCJ6 419 aa29.52■■■□□ 2.32
NKX2-1-205ENST00000546983 A1CFQ9NQ94 594 aaKnown RBP29.52■■■□□ 2.32
NKX2-1-205ENST00000546983 SEC63Q9UGP8 760 aaKnown RBP29.52■■■□□ 2.32
NKX2-1-205ENST00000546983 PLXNB2O15031 1838 aa29.52■■■□□ 2.32
NKX2-1-205ENST00000546983 SYNGAP1Q96PV0 1343 aa29.51■■■□□ 2.32
NKX2-1-205ENST00000546983 PNMA6FA0A0J9YX94 578 aa29.51■■■□□ 2.31
NKX2-1-205ENST00000546983 SNAP25P60880 206 aa29.51■■■□□ 2.31
NKX2-1-205ENST00000546983 MAMDC4Q6UXC1 1216 aa29.51■■■□□ 2.31
NKX2-1-205ENST00000546983 TINF2Q9BSI4 451 aa29.51■■■□□ 2.31
NKX2-1-205ENST00000546983 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.51■■■□□ 2.31
NKX2-1-205ENST00000546983 PAK6Q9NQU5 681 aaPredicted RBP29.51■■■□□ 2.31
NKX2-1-205ENST00000546983 ASB14A6NK59 587 aa29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 IGHA2P01877 340 aa29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 PGK2P07205 417 aa29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 GJA8P48165 433 aa29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 CACNB2Q08289 660 aaPredicted RBP29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 CCL14Q16627 93 aa29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 NSMFQ6X4W1 530 aa29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 Q6ZUG5 572 aa29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 GPHNQ9NQX3 736 aaPredicted RBP29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 CYP39A1Q9NYL5 469 aa29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 CNPY2Q9Y2B0 182 aa29.5■■■□□ 2.31
NKX2-1-205ENST00000546983 CAPN15O75808 1086 aa29.49■■■□□ 2.31
NKX2-1-205ENST00000546983 RGS19P49795 217 aa29.49■■■□□ 2.31
NKX2-1-205ENST00000546983 MTFR1Q15390 333 aa29.49■■■□□ 2.31
NKX2-1-205ENST00000546983 MICU3Q86XE3 530 aa29.49■■■□□ 2.31
NKX2-1-205ENST00000546983 IL17RAQ96F46 866 aa29.49■■■□□ 2.31
NKX2-1-205ENST00000546983 UNC93B1Q9H1C4 597 aa29.49■■■□□ 2.31
NKX2-1-205ENST00000546983 KLF18A0A0U1RQI7 1052 aa29.48■■■□□ 2.31
NKX2-1-205ENST00000546983 RNF207Q6ZRF8 634 aa29.48■■■□□ 2.31
NKX2-1-205ENST00000546983 TEX2Q8IWB9 1127 aa29.48■■■□□ 2.31
NKX2-1-205ENST00000546983 FAM133AQ8N9E0 248 aa29.48■■■□□ 2.31
NKX2-1-205ENST00000546983 IL27Q8NEV9 243 aa29.48■■■□□ 2.31
NKX2-1-205ENST00000546983 MYL10Q9BUA6 226 aa29.48■■■□□ 2.31
NKX2-1-205ENST00000546983 CPVLQ9H3G5 476 aa29.48■■■□□ 2.31
NKX2-1-205ENST00000546983 UPF2Q9HAU5 1272 aaKnown RBP29.48■■■□□ 2.31
NKX2-1-205ENST00000546983 HTTP42858 3142 aa29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 ANKRD1Q15327 319 aa29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 RTN1Q16799 776 aa29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 USH1GQ495M9 461 aa29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 MUM1L1Q5H9M0 696 aa29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 DNERQ8NFT8 737 aa29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 BRF1Q92994 677 aa29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 FLRT1Q9NZU1 646 aa29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 RBM27Q9P2N5 1060 aaKnown RBP29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 PCDHA1Q9Y5I3 950 aa29.47■■■□□ 2.31
NKX2-1-205ENST00000546983 PTPDC1A2A3K4 754 aa29.46■■■□□ 2.31
NKX2-1-205ENST00000546983 SGPL1O95470 568 aa29.46■■■□□ 2.31
NKX2-1-205ENST00000546983 SOX10P56693 466 aa29.46■■■□□ 2.31
NKX2-1-205ENST00000546983 EVCP57679 992 aa29.46■■■□□ 2.31
NKX2-1-205ENST00000546983 U2AF1L4Q8WU68 220 aaKnown RBP29.46■■■□□ 2.31
NKX2-1-205ENST00000546983 CLEC4DQ8WXI8 215 aa29.46■■■□□ 2.31
NKX2-1-205ENST00000546983 TCEANC2Q96MN5 208 aa29.46■■■□□ 2.31
NKX2-1-205ENST00000546983 GOLGA8AA7E2F4 631 aa29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 GOLGA8BA8MQT2 603 aa29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 CYP2C19P33261 490 aa29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 METAP2P50579 478 aaKnown RBP eCLIP29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 TMTC3Q6ZXV5 915 aa29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 HOMER1Q86YM7 354 aa29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 ANKLE1Q8NAG6 615 aa29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 PIGSQ96S52 555 aa29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 ALDH8A1Q9H2A2 487 aaPredicted RBP29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 ABHD16BQ9H3Z7 469 aa29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 GTF3C3Q9Y5Q9 886 aa29.45■■■□□ 2.31
NKX2-1-205ENST00000546983 MYCP01106 439 aaPredicted RBP29.44■■■□□ 2.3
NKX2-1-205ENST00000546983 CYBAP13498 195 aa29.44■■■□□ 2.3
NKX2-1-205ENST00000546983 BAATQ14032 418 aaPredicted RBP29.44■■■□□ 2.3
NKX2-1-205ENST00000546983 C8orf34Q49A92 452 aa29.44■■■□□ 2.3
NKX2-1-205ENST00000546983 DEFB118Q96PH6 123 aa29.44■■■□□ 2.3
NKX2-1-205ENST00000546983 PDRG1Q9NUG6 133 aa29.44■■■□□ 2.3
NKX2-1-205ENST00000546983 NAP1L2Q9ULW6 460 aaPredicted RBP29.44■■■□□ 2.3
NKX2-1-205ENST00000546983 hCG_1984214I3L0E3 225 aa29.43■■■□□ 2.3
NKX2-1-205ENST00000546983 NFIBO00712 420 aa29.43■■■□□ 2.3
NKX2-1-205ENST00000546983 SEPT4O43236 478 aa29.43■■■□□ 2.3
NKX2-1-205ENST00000546983 CYTH3O43739 400 aa29.43■■■□□ 2.3
NKX2-1-205ENST00000546983 COL9A3Q14050 684 aaPredicted RBP29.43■■■□□ 2.3
NKX2-1-205ENST00000546983 ZNF713Q8N859 430 aaPredicted RBP29.43■■■□□ 2.3
NKX2-1-205ENST00000546983 BRPF3Q9ULD4 1205 aa29.43■■■□□ 2.3
NKX2-1-205ENST00000546983 NID2Q14112 1375 aa29.42■■■□□ 2.3
NKX2-1-205ENST00000546983 CNGA1P29973 690 aa29.42■■■□□ 2.3
NKX2-1-205ENST00000546983 RPS6P62753 249 aaKnown RBP29.42■■■□□ 2.3
NKX2-1-205ENST00000546983 GHRHRQ02643 423 aa29.42■■■□□ 2.3
NKX2-1-205ENST00000546983 SRBD1Q8N5C6 995 aaKnown RBP29.42■■■□□ 2.3
NKX2-1-205ENST00000546983 ZNF274Q96GC6 653 aaPredicted RBP29.42■■■□□ 2.3
NKX2-1-205ENST00000546983 CRISPLD2Q9H0B8 497 aa29.42■■■□□ 2.3
NKX2-1-205ENST00000546983 RBBP6Q7Z6E9 1792 aaKnown RBP29.41■■■□□ 2.3
NKX2-1-205ENST00000546983 TFRCP02786 760 aaKnown RBP29.41■■■□□ 2.3
NKX2-1-205ENST00000546983 CPA1P15085 419 aa29.41■■■□□ 2.3
NKX2-1-205ENST00000546983 TRIM32Q13049 653 aa29.41■■■□□ 2.3
NKX2-1-205ENST00000546983 CCDC144CPQ8IYA2 1237 aa29.41■■■□□ 2.3
NKX2-1-205ENST00000546983 DDX20Q9UHI6 824 aaKnown RBP29.41■■■□□ 2.3
NKX2-1-205ENST00000546983 POTEFA5A3E0 1075 aa29.4■■■□□ 2.3
NKX2-1-205ENST00000546983 RXRAP19793 462 aa29.4■■■□□ 2.3
NKX2-1-205ENST00000546983 CNTN2Q02246 1040 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms