RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 KCNH6Q9H252 994 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 TRMT13Q9NUP7 481 aaKnown RBP11.1□□□□□ -0.63
SSH1-205ENST00000546812 TNNQ9UQP3 1299 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 BRWD1Q9NSI6 2320 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.09□□□□□ -0.63
SSH1-205ENST00000546812 ASB14A6NK59 587 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 NDUFB10O96000 172 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 OAZ1P54368 228 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 LEXMQ3ZCV2 418 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 IQSEC1Q6DN90 963 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 AACSQ86V21 672 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 KIFC2Q96AC6 838 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 TNKSO95271 1327 aa11.09□□□□□ -0.63
SSH1-205ENST00000546812 SOWAHBA6NEL2 793 aa11.08□□□□□ -0.64
SSH1-205ENST00000546812 GOLIM4O00461 696 aa11.08□□□□□ -0.64
SSH1-205ENST00000546812 MBD4O95243 580 aa11.08□□□□□ -0.64
SSH1-205ENST00000546812 PTGS1P23219 599 aa11.08□□□□□ -0.64
SSH1-205ENST00000546812 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
SSH1-205ENST00000546812 TMEM57Q8N5G2 664 aa11.08□□□□□ -0.64
SSH1-205ENST00000546812 FBXL18Q96ME1 805 aa11.08□□□□□ -0.64
SSH1-205ENST00000546812 UBE2ZQ9H832 354 aaPredicted RBP11.08□□□□□ -0.64
SSH1-205ENST00000546812 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
SSH1-205ENST00000546812 NYAP2Q9P242 653 aa11.08□□□□□ -0.64
SSH1-205ENST00000546812 LRRC37A2A6NM11 1700 aa11.08□□□□□ -0.64
SSH1-205ENST00000546812 PARP14Q460N5 1801 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 GBF1Q92538 1859 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 IQCF3P0C7M6 154 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 ZKSCAN2Q63HK3 967 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 TAPT1Q6NXT6 567 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 CTR9Q6PD62 1173 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 SPRED2Q7Z698 418 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.07□□□□□ -0.64
SSH1-205ENST00000546812 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.07□□□□□ -0.64
SSH1-205ENST00000546812 DDRGK1Q96HY6 314 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
SSH1-205ENST00000546812 C1orf115Q9H7X2 142 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 ACAD9Q9H845 621 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 A1CFQ9NQ94 594 aaKnown RBP11.07□□□□□ -0.64
SSH1-205ENST00000546812 HOMER2Q9NSB8 354 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 FEM1BQ9UK73 627 aa11.07□□□□□ -0.64
SSH1-205ENST00000546812 COL11A1P12107 1806 aaPredicted RBP11.07□□□□□ -0.64
SSH1-205ENST00000546812 PITPNM1O00562 1244 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 BAIAP3O94812 1187 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 FDX1P10109 184 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 KCNA5P22460 613 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 TMEM63BQ5T3F8 832 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 ERC1Q8IUD2 1116 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 RETREG2Q8NC44 543 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 GDPD5Q8WTR4 605 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 DNAJC2Q99543 621 aaKnown RBP11.06□□□□□ -0.64
SSH1-205ENST00000546812 POLR3EQ9NVU0 708 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 CLIP2Q9UDT6 1046 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 COG6Q9Y2V7 657 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 NAV1Q8NEY1 1877 aa11.06□□□□□ -0.64
SSH1-205ENST00000546812 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 LCHNA4D1U4 455 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 DCXO43602 365 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 IL9P15248 144 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 RASA1P20936 1047 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 ADD2P35612 726 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 KCNJ6P48051 423 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 PURAQ00577 322 aaKnown RBP11.05□□□□□ -0.64
SSH1-205ENST00000546812 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
SSH1-205ENST00000546812 DUSP28Q4G0W2 176 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 PTCRAQ6ISU1 281 aaPredicted RBP11.05□□□□□ -0.64
SSH1-205ENST00000546812 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 EEPD1Q7L9B9 569 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 FBXO16Q8IX29 292 aaPredicted RBP11.05□□□□□ -0.64
SSH1-205ENST00000546812 MKL1Q969V6 931 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 SUGCTQ9HAC7 445 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 VTA1Q9NP79 307 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 EXOC6BQ9Y2D4 811 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 SLC4A4Q9Y6R1 1079 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
SSH1-205ENST00000546812 ZNF536O15090 1300 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 TRIOO75962 3097 aa11.05□□□□□ -0.64
SSH1-205ENST00000546812 CPT1AP50416 773 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 ERVK-21P61565 698 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 BFSP2Q13515 415 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 NBPF20Q3BBV1 942 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 TKFCQ3LXA3 575 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 NFRKBQ6P4R8 1299 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 RPAP2Q8IXW5 612 aaPredicted RBP11.04□□□□□ -0.64
SSH1-205ENST00000546812 FTSJ3Q8IY81 847 aaKnown RBP11.04□□□□□ -0.64
SSH1-205ENST00000546812 MORC4Q8TE76 937 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 MTG1Q9BT17 334 aaPredicted RBP11.04□□□□□ -0.64
SSH1-205ENST00000546812 ZBED2Q9BTP6 218 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 MKNK2Q9HBH9 465 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 IL1RAPL2Q9NP60 686 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 GPHNQ9NQX3 736 aaPredicted RBP11.04□□□□□ -0.64
SSH1-205ENST00000546812 RNF146Q9NTX7 359 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 SYNPO2Q9UMS6 1093 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 USP34Q70CQ2 3546 aa11.04□□□□□ -0.64
SSH1-205ENST00000546812 CFAP54Q96N23 3096 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 IGKV6D-41A0A0C4DH26 115 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 MYL3P08590 195 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms