RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 BAIAP3O94812 1187 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 IQCF3P0C7M6 154 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 CNTN2Q02246 1040 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 PUS10Q3MIT2 529 aaKnown RBP13.01□□□□□ -0.33
TMEM116-203ENST00000546537 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 HFE2Q6ZVN8 426 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 LCORLQ8N3X6 602 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 FAM133AQ8N9E0 248 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 SSH3Q8TE77 659 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 ANKS1AQ92625 1134 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 SUGCTQ9HAC7 445 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 RAVER2Q9HCJ3 691 aaKnown RBP13.01□□□□□ -0.33
TMEM116-203ENST00000546537 MYH4Q9Y623 1939 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 PITPNM1O00562 1244 aa13□□□□□ -0.33
TMEM116-203ENST00000546537 PDE6AP16499 860 aa13□□□□□ -0.33
TMEM116-203ENST00000546537 C12orf60Q5U649 245 aa13□□□□□ -0.33
TMEM116-203ENST00000546537 IQSEC1Q6DN90 963 aa13□□□□□ -0.33
TMEM116-203ENST00000546537 C16orf86Q6ZW13 317 aa13□□□□□ -0.33
TMEM116-203ENST00000546537 TRMT2AQ8IZ69 625 aaKnown RBP13□□□□□ -0.33
TMEM116-203ENST00000546537 NEK9Q8TD19 979 aa13□□□□□ -0.33
TMEM116-203ENST00000546537 SLC38A10Q9HBR0 1119 aa13□□□□□ -0.33
TMEM116-203ENST00000546537 ATP8A2Q9NTI2 1148 aa13□□□□□ -0.33
TMEM116-203ENST00000546537 TRIP12Q14669 1992 aaPredicted RBP13□□□□□ -0.33
TMEM116-203ENST00000546537 SCN10AQ9Y5Y9 1956 aa13□□□□□ -0.33
TMEM116-203ENST00000546537 ZNF532Q9HCE3 1301 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 TCRBV5S4A2TA0A5A2 114 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 SOWAHBA6NEL2 793 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 ASB14A6NK59 587 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 F5H6K3 240 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 OAZ1P54368 228 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 FOXK2Q01167 660 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 KLRC3Q07444 240 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
TMEM116-203ENST00000546537 TMEM63BQ5T3F8 832 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 TAPT1Q6NXT6 567 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM116-203ENST00000546537 MFSD14AQ96MC6 490 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM116-203ENST00000546537 FTOQ9C0B1 505 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM116-203ENST00000546537 PDGFCQ9NRA1 345 aa12.99□□□□□ -0.33
TMEM116-203ENST00000546537 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
TMEM116-203ENST00000546537 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
TMEM116-203ENST00000546537 LCTP09848 1927 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 CYP2D7A0A087X1C5 515 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 PRKAB2O43741 272 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 NDUFB10O96000 172 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 KCNJ6P48051 423 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 ERVK-21P61565 698 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 ATP8B2P98198 1209 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 RETREG2Q8NC44 543 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 KIFC2Q96AC6 838 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 TGS1Q96RS0 853 aaKnown RBP12.98□□□□□ -0.33
TMEM116-203ENST00000546537 ARMT1Q9H993 441 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 POLR3EQ9NVU0 708 aa12.98□□□□□ -0.33
TMEM116-203ENST00000546537 USP17L12C9JPN9 530 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 USP17L21D6R901 530 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 ANP32CO43423 234 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 WDR5P61964 334 aaKnown RBP12.97□□□□□ -0.33
TMEM116-203ENST00000546537 PURAQ00577 322 aaKnown RBP12.97□□□□□ -0.33
TMEM116-203ENST00000546537 ZP2Q05996 745 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 TMCO2Q7Z6W1 182 aaPredicted RBP12.97□□□□□ -0.33
TMEM116-203ENST00000546537 PRSS33Q8NF86 280 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 ZBED2Q9BTP6 218 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 ACAD9Q9H845 621 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 A1CFQ9NQ94 594 aaKnown RBP12.97□□□□□ -0.33
TMEM116-203ENST00000546537 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 NYAP2Q9P242 653 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 PRKAG3Q9UGI9 489 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 MTUS1Q9ULD2 1270 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 CFAP54Q96N23 3096 aa12.97□□□□□ -0.33
TMEM116-203ENST00000546537 TRIOO75962 3097 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 LINC01553A4QN01 128 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 BCAR3O75815 825 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 GJB5O95377 273 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.33
TMEM116-203ENST00000546537 DEFB103AP81534 67 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 BFSP2Q13515 415 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 EEPD1Q7L9B9 569 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 FBXO16Q8IX29 292 aaPredicted RBP12.96□□□□□ -0.33
TMEM116-203ENST00000546537 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 RAD9AQ99638 391 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 FEM1BQ9UK73 627 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 COG6Q9Y2V7 657 aa12.96□□□□□ -0.33
TMEM116-203ENST00000546537 DDX49Q9Y6V7 483 aaKnown RBP12.96□□□□□ -0.33
TMEM116-203ENST00000546537 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
TMEM116-203ENST00000546537 TRIM27P14373 513 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 PTPN5P54829 565 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
TMEM116-203ENST00000546537 NBPF20Q3BBV1 942 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 DUSP28Q4G0W2 176 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 NFRKBQ6P4R8 1299 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 KIAA1211Q6ZU35 1233 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 ADHFE1Q8IWW8 467 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 MTG1Q9BT17 334 aaPredicted RBP12.95□□□□□ -0.34
TMEM116-203ENST00000546537 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
TMEM116-203ENST00000546537 VTA1Q9NP79 307 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 FAM50BQ9Y247 325 aa12.95□□□□□ -0.34
TMEM116-203ENST00000546537 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms