RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 CNTNAP5Q8WYK1 1306 aa24.09■■□□□ 1.45
SCARB1-211ENST00000546215 STK3Q13188 491 aa24.09■■□□□ 1.45
SCARB1-211ENST00000546215 USH1GQ495M9 461 aa24.09■■□□□ 1.45
SCARB1-211ENST00000546215 PIBF1Q8WXW3 757 aa24.09■■□□□ 1.45
SCARB1-211ENST00000546215 RRP36Q96EU6 259 aaKnown RBP24.09■■□□□ 1.45
SCARB1-211ENST00000546215 MMP19Q99542 508 aa24.09■■□□□ 1.45
SCARB1-211ENST00000546215 AMNQ9BXJ7 453 aa24.09■■□□□ 1.45
SCARB1-211ENST00000546215 ACAD9Q9H845 621 aa24.09■■□□□ 1.45
SCARB1-211ENST00000546215 ADORA2AP29274 412 aa24.08■■□□□ 1.45
SCARB1-211ENST00000546215 NTRK3Q16288 839 aa24.08■■□□□ 1.45
SCARB1-211ENST00000546215 NOL8Q76FK4 1167 aaKnown RBP24.08■■□□□ 1.45
SCARB1-211ENST00000546215 PFKFB2O60825 505 aa24.08■■□□□ 1.44
SCARB1-211ENST00000546215 MAP2K5Q13163 448 aa24.08■■□□□ 1.44
SCARB1-211ENST00000546215 IRF5Q13568 498 aa24.08■■□□□ 1.44
SCARB1-211ENST00000546215 KCTD2Q14681 263 aa24.08■■□□□ 1.44
SCARB1-211ENST00000546215 ME3Q16798 604 aa24.08■■□□□ 1.44
SCARB1-211ENST00000546215 CLEC4DQ8WXI8 215 aa24.08■■□□□ 1.44
SCARB1-211ENST00000546215 PTCH2Q9Y6C5 1203 aa24.08■■□□□ 1.44
SCARB1-211ENST00000546215 hCG_1642624A0A1W2PR95 340 aa24.07■■□□□ 1.44
SCARB1-211ENST00000546215 SCRN1Q12765 414 aa24.07■■□□□ 1.44
SCARB1-211ENST00000546215 FBXO46Q6PJ61 603 aaPredicted RBP24.07■■□□□ 1.44
SCARB1-211ENST00000546215 IL27Q8NEV9 243 aa24.07■■□□□ 1.44
SCARB1-211ENST00000546215 SLKQ9H2G2 1235 aaPredicted RBP24.07■■□□□ 1.44
SCARB1-211ENST00000546215 ZNF236Q9UL36 1845 aa24.06■■□□□ 1.44
SCARB1-211ENST00000546215 ABCB11O95342 1321 aa24.06■■□□□ 1.44
SCARB1-211ENST00000546215 NFIBO00712 420 aa24.06■■□□□ 1.44
SCARB1-211ENST00000546215 COBLO75128 1261 aa24.06■■□□□ 1.44
SCARB1-211ENST00000546215 LARGE1O95461 756 aa24.06■■□□□ 1.44
SCARB1-211ENST00000546215 CYP2B6P20813 491 aa24.06■■□□□ 1.44
SCARB1-211ENST00000546215 RAET1EQ8TD07 263 aa24.06■■□□□ 1.44
SCARB1-211ENST00000546215 MCOLN1Q9GZU1 580 aa24.06■■□□□ 1.44
SCARB1-211ENST00000546215 A1CFQ9NQ94 594 aaKnown RBP24.06■■□□□ 1.44
SCARB1-211ENST00000546215 SEC63Q9UGP8 760 aaKnown RBP24.06■■□□□ 1.44
SCARB1-211ENST00000546215 PCDHA1Q9Y5I3 950 aa24.06■■□□□ 1.44
SCARB1-211ENST00000546215 HOXC6P09630 235 aa24.05■■□□□ 1.44
SCARB1-211ENST00000546215 XRCC5P13010 732 aaKnown RBP24.05■■□□□ 1.44
SCARB1-211ENST00000546215 IFNAR1P17181 557 aa24.05■■□□□ 1.44
SCARB1-211ENST00000546215 RGS2P41220 211 aa24.05■■□□□ 1.44
SCARB1-211ENST00000546215 ANKRD35Q8N283 1001 aa24.05■■□□□ 1.44
SCARB1-211ENST00000546215 LIMCH1Q9UPQ0 1083 aa24.05■■□□□ 1.44
SCARB1-211ENST00000546215 V9GY48 417 aaPredicted RBP24.05■■□□□ 1.44
SCARB1-211ENST00000546215 DNAJC25-GNG10A0A024R161 153 aa24.04■■□□□ 1.44
SCARB1-211ENST00000546215 DPP9Q86TI2 863 aa24.04■■□□□ 1.44
SCARB1-211ENST00000546215 MRPL11Q9Y3B7 192 aaKnown RBP24.04■■□□□ 1.44
SCARB1-211ENST00000546215 ST18O60284 1047 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 PGK2P07205 417 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 TRAF1Q13077 416 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 NPLOC4Q8TAT6 608 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 PHKBQ93100 1093 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 DDX11Q96FC9 970 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 APBA2Q99767 749 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 CYP39A1Q9NYL5 469 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 OPLAHO14841 1288 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 NSMFQ6X4W1 530 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 NECAB1Q8N987 351 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 RGS22Q8NE09 1264 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 PXYLP1Q8TE99 480 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 GTF3C6Q969F1 213 aa24.03■■□□□ 1.44
SCARB1-211ENST00000546215 CPLX1O14810 134 aa24.02■■□□□ 1.44
SCARB1-211ENST00000546215 PRPF3O43395 683 aaKnown RBP24.02■■□□□ 1.44
SCARB1-211ENST00000546215 ADCY3O60266 1144 aa24.02■■□□□ 1.44
SCARB1-211ENST00000546215 ZNF792Q3KQV3 632 aa24.02■■□□□ 1.44
SCARB1-211ENST00000546215 RNF26Q9BY78 433 aaPredicted RBP24.02■■□□□ 1.44
SCARB1-211ENST00000546215 PFASO15067 1338 aa24.02■■□□□ 1.44
SCARB1-211ENST00000546215 PPFIA3O75145 1194 aa24.01■■□□□ 1.43
SCARB1-211ENST00000546215 CD2BP2O95400 341 aaKnown RBP24.01■■□□□ 1.43
SCARB1-211ENST00000546215 BAATQ14032 418 aaPredicted RBP24.01■■□□□ 1.43
SCARB1-211ENST00000546215 CCL14Q16627 93 aa24.01■■□□□ 1.43
SCARB1-211ENST00000546215 TBC1D5Q92609 795 aa24.01■■□□□ 1.43
SCARB1-211ENST00000546215 MAF1Q9H063 256 aa24.01■■□□□ 1.43
SCARB1-211ENST00000546215 SLC5A4Q9NY91 659 aa24.01■■□□□ 1.43
SCARB1-211ENST00000546215 ELNP15502 786 aa24■■□□□ 1.43
SCARB1-211ENST00000546215 GRK4P32298 578 aa24■■□□□ 1.43
SCARB1-211ENST00000546215 RPS6P62753 249 aaKnown RBP24■■□□□ 1.43
SCARB1-211ENST00000546215 PKN1Q16512 942 aa24■■□□□ 1.43
SCARB1-211ENST00000546215 CPLX2Q6PUV4 134 aaKnown RBP24■■□□□ 1.43
SCARB1-211ENST00000546215 FAM133AQ8N9E0 248 aa24■■□□□ 1.43
SCARB1-211ENST00000546215 SLAIN1Q8ND83 568 aa24■■□□□ 1.43
SCARB1-211ENST00000546215 ZSCAN31Q96LW9 406 aaPredicted RBP24■■□□□ 1.43
SCARB1-211ENST00000546215 SLC26A6Q9BXS9 759 aa24■■□□□ 1.43
SCARB1-211ENST00000546215 DIS3Q9Y2L1 958 aaKnown RBP24■■□□□ 1.43
SCARB1-211ENST00000546215 PLXNA1Q9UIW2 1896 aa24■■□□□ 1.43
SCARB1-211ENST00000546215 CTDNEP1O95476 244 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 CNTN2Q02246 1040 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 ST3GAL1Q11201 340 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 PFKFB3Q16875 520 aaPredicted RBP23.99■■□□□ 1.43
SCARB1-211ENST00000546215 WWC2Q6AWC2 1192 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 RNF207Q6ZRF8 634 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 MCF2L2Q86YR7 1114 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 TRIB2Q92519 343 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 GPKOWQ92917 476 aaPredicted RBP eCLIP23.99■■□□□ 1.43
SCARB1-211ENST00000546215 MAML3Q96JK9 1138 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 FLRT1Q9NZU1 646 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 RBM27Q9P2N5 1060 aaKnown RBP23.99■■□□□ 1.43
SCARB1-211ENST00000546215 PTPDC1A2A3K4 754 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 POTEB2H3BUK9 544 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 IGHA2P01877 340 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 GHRHRQ02643 423 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 SLC30A10Q6XR72 485 aa23.99■■□□□ 1.43
SCARB1-211ENST00000546215 HEATR3Q7Z4Q2 680 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms