RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 DEFB129Q9H1M3 183 aa15.54■□□□□ 0.08
HCFC2-202ENST00000544223 MYH7BA7E2Y1 1941 aa15.54■□□□□ 0.08
HCFC2-202ENST00000544223 CAP2P40123 477 aa15.54■□□□□ 0.08
HCFC2-202ENST00000544223 KIF4BQ2VIQ3 1234 aa15.54■□□□□ 0.08
HCFC2-202ENST00000544223 SLC30A10Q6XR72 485 aa15.54■□□□□ 0.08
HCFC2-202ENST00000544223 NEK8Q86SG6 692 aa15.54■□□□□ 0.08
HCFC2-202ENST00000544223 TRMT44Q8IYL2 757 aaKnown RBP15.54■□□□□ 0.08
HCFC2-202ENST00000544223 ZKSCAN4Q969J2 545 aaPredicted RBP15.54■□□□□ 0.08
HCFC2-202ENST00000544223 FERMT2Q96AC1 680 aa15.54■□□□□ 0.08
HCFC2-202ENST00000544223 VPS33BQ9H267 617 aa15.54■□□□□ 0.08
HCFC2-202ENST00000544223 POLR2AP24928 1970 aaKnown RBP15.54■□□□□ 0.08
HCFC2-202ENST00000544223 ARFGEF1Q9Y6D6 1849 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 ESPNB1AK53 854 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 ATP1A3P13637 1013 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 TRAPPC10P48553 1259 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 NLRP12P59046 1061 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 CEP57L1Q8IYX8 460 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 MTMR14Q8NCE2 650 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 CCDC12Q8WUD4 166 aaPredicted RBP15.53■□□□□ 0.08
HCFC2-202ENST00000544223 PAGE5Q96GU1 130 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 TIGD1Q96MW7 591 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 ZNF341Q9BYN7 854 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 MAN1B1Q9UKM7 699 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 PRR12Q9ULL5 1215 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 PHF20L1A8MW92 1017 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 GOLGA6L19H0YKK7 550 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 DDNO94850 711 aaPredicted RBP15.53■□□□□ 0.08
HCFC2-202ENST00000544223 SMARCA1P28370 1054 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 LMOD1P29536 600 aaPredicted RBP15.53■□□□□ 0.08
HCFC2-202ENST00000544223 ZNF280AP59817 542 aaPredicted RBP15.53■□□□□ 0.08
HCFC2-202ENST00000544223 DHX8Q14562 1220 aaKnown RBP15.53■□□□□ 0.08
HCFC2-202ENST00000544223 DTHD1Q6ZMT9 781 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 RASSF8Q8NHQ8 419 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 DCAF4Q8WV16 495 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 MTMR8Q96EF0 704 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 TUBE1Q9UJT0 475 aa15.53■□□□□ 0.08
HCFC2-202ENST00000544223 NEMFO60524 1076 aa15.52■□□□□ 0.08
HCFC2-202ENST00000544223 HIRAP54198 1017 aaPredicted RBP15.52■□□□□ 0.08
HCFC2-202ENST00000544223 SYDE2Q5VT97 1194 aa15.52■□□□□ 0.08
HCFC2-202ENST00000544223 KRT25Q7Z3Z0 450 aa15.52■□□□□ 0.08
HCFC2-202ENST00000544223 RIC8AQ9NPQ8 531 aa15.52■□□□□ 0.08
HCFC2-202ENST00000544223 UBXN2AP68543 259 aa15.52■□□□□ 0.07
HCFC2-202ENST00000544223 CUL4BQ13620 913 aa15.52■□□□□ 0.07
HCFC2-202ENST00000544223 FAM83AQ86UY5 434 aa15.52■□□□□ 0.07
HCFC2-202ENST00000544223 GMCL1P1Q8NEA9 526 aa15.52■□□□□ 0.07
HCFC2-202ENST00000544223 SPON1Q9HCB6 807 aa15.52■□□□□ 0.07
HCFC2-202ENST00000544223 POTEMA6NI47 508 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 FMR1Q06787 632 aaKnown RBP eCLIP15.51■□□□□ 0.07
HCFC2-202ENST00000544223 GALNT17Q6IS24 598 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 DRC7Q8IY82 874 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 CUL5Q93034 780 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 MAPK8IP1Q9UQF2 711 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 TMX2Q9Y320 296 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 OPLAHO14841 1288 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 YBX3P16989 372 aaKnown RBP eCLIP15.51■□□□□ 0.07
HCFC2-202ENST00000544223 ARID5BQ14865 1188 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 NCAPHQ15003 741 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 E2F4Q16254 413 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 KLHL10Q6JEL2 608 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 FEZ1Q99689 392 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 ARHGEF10LQ9HCE6 1279 aa15.51■□□□□ 0.07
HCFC2-202ENST00000544223 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
HCFC2-202ENST00000544223 MEIS2O14770 477 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 SLFN14P0C7P3 912 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 STX17P56962 302 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 NAALADL2Q58DX5 795 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 GMCL1Q96IK5 515 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 MED15Q96RN5 788 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 NUDT12Q9BQG2 462 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 HSD3B7Q9H2F3 369 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 OR52Z1P0C646 297 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 CD44P16070 742 aaKnown RBP15.5■□□□□ 0.07
HCFC2-202ENST00000544223 CLK2P49760 499 aaKnown RBP15.5■□□□□ 0.07
HCFC2-202ENST00000544223 ZNF75DP51815 510 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 STAT2P52630 851 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 PDXDC2PQ6P474 469 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 FCHSD1Q86WN1 690 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 CYP2W1Q8TAV3 490 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 SMARCE1Q969G3 411 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 GGA3Q9NZ52 723 aa15.5■□□□□ 0.07
HCFC2-202ENST00000544223 FBXO11Q86XK2 927 aa15.49■□□□□ 0.07
HCFC2-202ENST00000544223 ESYT2A0FGR8 921 aa15.49■□□□□ 0.07
HCFC2-202ENST00000544223 BMP15O95972 392 aa15.49■□□□□ 0.07
HCFC2-202ENST00000544223 PTGS1P23219 599 aa15.49■□□□□ 0.07
HCFC2-202ENST00000544223 CALCRLQ16602 461 aa15.49■□□□□ 0.07
HCFC2-202ENST00000544223 CCDC144BQ3MJ40 725 aa15.49■□□□□ 0.07
HCFC2-202ENST00000544223 FKBP1CQ5VVH2 108 aa15.49■□□□□ 0.07
HCFC2-202ENST00000544223 ATAD5Q96QE3 1844 aa15.48■□□□□ 0.07
HCFC2-202ENST00000544223 COL2A1P02458 1487 aaPredicted RBP15.48■□□□□ 0.07
HCFC2-202ENST00000544223 UBA7P41226 1012 aa15.48■□□□□ 0.07
HCFC2-202ENST00000544223 STAT6P42226 847 aa15.48■□□□□ 0.07
HCFC2-202ENST00000544223 SYT17Q9BSW7 474 aa15.48■□□□□ 0.07
HCFC2-202ENST00000544223 AMNQ9BXJ7 453 aa15.48■□□□□ 0.07
HCFC2-202ENST00000544223 FANCLQ9NW38 375 aa15.48■□□□□ 0.07
HCFC2-202ENST00000544223 CFBP00751 764 aa15.48■□□□□ 0.07
HCFC2-202ENST00000544223 SARSP49591 514 aaKnown RBP15.48■□□□□ 0.07
HCFC2-202ENST00000544223 MRPL12P52815 198 aaKnown RBP15.48■□□□□ 0.07
HCFC2-202ENST00000544223 DPYDQ12882 1025 aa15.48■□□□□ 0.07
HCFC2-202ENST00000544223 LRMPQ12912 555 aa15.48■□□□□ 0.07
HCFC2-202ENST00000544223 MTMR2Q13614 643 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms