RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 DUSP15Q9H1R2 295 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-207ENST00000544052 INTS7Q9NVH2 962 aaKnown RBP5.18□□□□□ -1.58
SCFD1-207ENST00000544052 MAGEC2Q9UBF1 373 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-207ENST00000544052 GTF2IRD1Q9UHL9 959 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 RAXQ9Y2V3 346 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 F13BP05160 661 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 PCBP1Q15365 356 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCFD1-207ENST00000544052 CWF19L1Q69YN2 538 aaKnown RBP5.17□□□□□ -1.58
SCFD1-207ENST00000544052 DDX42Q86XP3 938 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCFD1-207ENST00000544052 LEO1Q8WVC0 666 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-207ENST00000544052 TCTN2Q96GX1 697 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 CCDC140Q96MF4 163 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 TMEFF2Q9UIK5 374 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-207ENST00000544052 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 C2orf71A6NGG8 1288 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 OPA1O60313 960 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 MARCH6O60337 910 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 CRTAMO95727 393 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 CPP00450 1065 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 SRFP11831 508 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 FAM50AQ14320 339 aaKnown RBP5.17□□□□□ -1.58
SCFD1-207ENST00000544052 NKPD1Q17RQ9 610 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 PLEKHG6Q3KR16 790 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 CYP27C1Q4G0S4 372 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 FRS2Q8WU20 508 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 DDX1Q92499 740 aaKnown RBP5.17□□□□□ -1.58
SCFD1-207ENST00000544052 PCDHA9Q9Y5H5 950 aa5.17□□□□□ -1.58
SCFD1-207ENST00000544052 GNAT3A8MTJ3 354 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 FAM155AB1AL88 458 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-207ENST00000544052 IGF2BP3O00425 579 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCFD1-207ENST00000544052 AURKAO14965 403 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 KPNA6O60684 536 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 GSNP06396 782 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 JMJD7P0C870 316 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 PRR23CQ6ZRP0 262 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 C22orf34Q6ZV56 151 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 CCDC103Q8IW40 242 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 AFAP1L2Q8N4X5 818 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 DAGLBQ8NCG7 672 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 PIWIL2Q8TC59 973 aaKnown RBP5.16□□□□□ -1.58
SCFD1-207ENST00000544052 SLC12A9Q9BXP2 914 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 GPR62Q9BZJ7 368 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 IRF2BPLQ9H1B7 796 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 MAPRE3Q9UPY8 281 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 PCDHA8Q9Y5H6 950 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 ST14Q9Y5Y6 855 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 TCRBV16S1A1N1A0A5B0 115 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 EFCAB14O75071 495 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 PDGFRBP09619 1106 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 SOX5P35711 763 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 NEK4P51957 841 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 STYK1Q6J9G0 422 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 PKN3Q6P5Z2 889 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 FERMT3Q86UX7 667 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 PPIL6Q8IXY8 311 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 ZNF655Q8N720 491 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-207ENST00000544052 ENOX1Q8TC92 643 aaKnown RBP5.16□□□□□ -1.58
SCFD1-207ENST00000544052 MTFR1LQ9H019 292 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 G3BP2Q9UN86 482 aaKnown RBP5.16□□□□□ -1.58
SCFD1-207ENST00000544052 BACE2Q9Y5Z0 518 aa5.16□□□□□ -1.58
SCFD1-207ENST00000544052 CC2D2AQ9P2K1 1620 aa5.15□□□□□ -1.58
SCFD1-207ENST00000544052 MSCO60682 206 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 LCP1P13796 627 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 VAV1P15498 845 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 OXCT1P55809 520 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 STRN3Q13033 797 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 SEPT7Q16181 437 aaKnown RBP5.15□□□□□ -1.59
SCFD1-207ENST00000544052 MAMDC2Q7Z304 686 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-207ENST00000544052 USHBP1Q8N6Y0 703 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 NPLOC4Q8TAT6 608 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 MAGEB10Q96LZ2 347 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-207ENST00000544052 HSPA12BQ96MM6 686 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 PHF20Q9BVI0 1012 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 HOMER2Q9NSB8 354 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 CLEC1BQ9P126 229 aa5.15□□□□□ -1.59
SCFD1-207ENST00000544052 H3BS24 57 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 HYAL3O43820 417 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-207ENST00000544052 PLS3P13797 630 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 BMP8BP34820 402 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 SEPHS1P49903 392 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 RNF43Q68DV7 783 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 ABHD17CQ6PCB6 329 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 SPACA3Q8IXA5 215 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 DCAF4Q8WV16 495 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 FOXP3Q9BZS1 431 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 LRRC4CQ9HCJ2 640 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 GPATCH2Q9NW75 528 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 ZSWIM5Q9P217 1185 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 WDR64B1ANS9 1081 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 FKTNO75072 461 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 PARNO95453 639 aaKnown RBP5.14□□□□□ -1.59
SCFD1-207ENST00000544052 ASLP04424 464 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 SYPP08247 313 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 GSTM1P09488 218 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 TPP2P29144 1249 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-207ENST00000544052 IGFALSP35858 605 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 GUCY1A3Q02108 690 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 CYP27A1Q02318 531 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 NFIAQ12857 509 aa5.14□□□□□ -1.59
SCFD1-207ENST00000544052 SKOR2Q2VWA4 1001 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms