RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 CLEC4DQ8WXI8 215 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 FERMT2Q96AC1 680 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 KRT23Q9C075 422 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 ZHX1Q9UKY1 873 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 FAM184BQ9ULE4 1060 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 SYNRGQ9UMZ2 1314 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 COL6A3P12111 3177 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 MYADML2A6NDP7 307 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 NFIBO00712 420 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 CTAGE5O15320 804 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 GOLGA8HP0CJ92 632 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 NKX3-2P78367 333 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 IRX5P78411 483 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 BAATQ14032 418 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 GPATCH4Q5T3I0 446 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 CYB5R4Q7L1T6 521 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 RNF180Q86T96 592 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 UBA5Q9GZZ9 404 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 UPF3AQ9H1J1 476 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 CNNM2Q9H8M5 875 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 TNKSO95271 1327 aa15.38■□□□□ 0.05
TNFRSF1A-215ENST00000543359 LRRC37A2A6NM11 1700 aa15.37■□□□□ 0.05
TNFRSF1A-215ENST00000543359 MYCNP04198 464 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-215ENST00000543359 RUFY2Q8WXA3 655 aa15.37■□□□□ 0.05
TNFRSF1A-215ENST00000543359 MAP4K1Q92918 833 aa15.37■□□□□ 0.05
TNFRSF1A-215ENST00000543359 TSEN34Q9BSV6 310 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-215ENST00000543359 KAT14Q9H8E8 782 aa15.37■□□□□ 0.05
TNFRSF1A-215ENST00000543359 WDR19Q8NEZ3 1342 aa15.37■□□□□ 0.05
TNFRSF1A-215ENST00000543359 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 A0A1W2PQ45 241 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 A0A1W2PQY0 241 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 ASB14A6NK59 587 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 SOX1O00570 391 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 CST5P28325 142 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 GJA9P57773 515 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 TRIM60Q495X7 471 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 TMEM63BQ5T3F8 832 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 TAPT1Q6NXT6 567 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 NSMFQ6X4W1 530 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 STOX1Q6ZVD7 989 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 SKAP1Q86WV1 359 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 GNEQ9Y223 722 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 ATP11BQ9Y2G3 1177 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 LTBP2Q14767 1821 aa15.36■□□□□ 0.05
TNFRSF1A-215ENST00000543359 ACLYP53396 1101 aa15.35■□□□□ 0.05
TNFRSF1A-215ENST00000543359 TLE2Q04725 743 aa15.35■□□□□ 0.05
TNFRSF1A-215ENST00000543359 KCNA10Q16322 511 aa15.35■□□□□ 0.05
TNFRSF1A-215ENST00000543359 ASPRV1Q53RT3 343 aa15.35■□□□□ 0.05
TNFRSF1A-215ENST00000543359 JMJD4Q9H9V9 463 aa15.35■□□□□ 0.05
TNFRSF1A-215ENST00000543359 SENP2Q9HC62 589 aa15.35■□□□□ 0.05
TNFRSF1A-215ENST00000543359 PDGFCQ9NRA1 345 aa15.35■□□□□ 0.05
TNFRSF1A-215ENST00000543359 PNMA2Q9UL42 364 aa15.35■□□□□ 0.05
TNFRSF1A-215ENST00000543359 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-215ENST00000543359 TRIM43BA6NCK2 446 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 E7EWF7 191 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 SMPD1P17405 629 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 PTGS1P23219 599 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 MDM2Q00987 491 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 SLC35G1Q2M3R5 365 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 SLC30A10Q6XR72 485 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 SH3RF1Q7Z6J0 888 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 ADGRF4Q8IZF3 695 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 STAG2Q8N3U4 1231 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 RGS22Q8NE09 1264 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 TRIM43Q96BQ3 446 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 UBAC1Q9BSL1 405 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 LSG1Q9H089 658 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 PDLIM7Q9NR12 457 aa15.34■□□□□ 0.05
TNFRSF1A-215ENST00000543359 A0A0C4DFX4 3053 aa15.33■□□□□ 0.05
TNFRSF1A-215ENST00000543359 LOC102724159A0A0B4J2E5 919 aa15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 PALM3A6NDB9 673 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 MOXD2PA6NHM9 499 aa15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 PARP1P09874 1014 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ALDH5A1P51649 535 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ANTXR2P58335 489 aa15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 RPS6P62753 249 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 TNFAIP2Q03169 654 aa15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 PWP2Q15269 919 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 IFIT1BQ5T764 474 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 RNF207Q6ZRF8 634 aa15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ANKRD33Q7Z3H0 272 aa15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 FBXO16Q8IX29 292 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 TBC1D5Q92609 795 aa15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 MTMR8Q96EF0 704 aa15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 UBE2OQ9C0C9 1292 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 MAD2L2Q9UI95 211 aa15.33■□□□□ 0.04
TNFRSF1A-215ENST00000543359 RBM47A0AV96 593 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 PTPDC1A2A3K4 754 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ASGR1P07306 291 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 C6orf222P0C671 652 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 EDNRBP24530 442 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 ITGB8P26012 769 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CDK7P50613 346 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 COL9A3Q14050 684 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CDC37Q16543 378 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 QRICH1Q2TAL8 776 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 LRIT3Q3SXY7 679 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 IQSEC1Q6DN90 963 aa15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-215ENST00000543359 MB21D2Q8IYB1 491 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms