RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 CUL5Q93034 780 aa9.21□□□□□ -0.94
MRPL40P1-201ENST00000542687 SHISA4Q96DD7 197 aa9.21□□□□□ -0.94
MRPL40P1-201ENST00000542687 PARK7Q99497 189 aaKnown RBP9.21□□□□□ -0.94
MRPL40P1-201ENST00000542687 PTPN18Q99952 460 aa9.21□□□□□ -0.94
MRPL40P1-201ENST00000542687 RIC8AQ9NPQ8 531 aa9.21□□□□□ -0.94
MRPL40P1-201ENST00000542687 RABGAP1Q9Y3P9 1069 aa9.21□□□□□ -0.94
MRPL40P1-201ENST00000542687 ZNF536O15090 1300 aa9.21□□□□□ -0.94
MRPL40P1-201ENST00000542687 POLR2AP24928 1970 aaKnown RBP9.21□□□□□ -0.94
MRPL40P1-201ENST00000542687 DOCK1Q14185 1865 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 RASSF10A6NK89 507 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 CYP2C8P10632 490 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 GCLCP48506 637 aaPredicted RBP9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 RESTQ13127 1097 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 NOGQ13253 232 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 MCTP2Q6DN12 878 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 SNRNP48Q6IEG0 339 aaKnown RBP9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 IFNL1Q8IU54 200 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 NOSTRINQ8IVI9 506 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 TEX2Q8IWB9 1127 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 REM2Q8IYK8 340 aaPredicted RBP9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 FAM43AQ8N2R8 423 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 DAGLBQ8NCG7 672 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 OXER1Q8TDS5 423 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 TNPO1Q92973 898 aaKnown RBP9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 CAPNS2Q96L46 248 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 PAGR1Q9BTK6 254 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 TEX13BQ9BXU2 312 aa9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 ZCCHC17Q9NP64 241 aaKnown RBP9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 BIN2Q9UBW5 565 aaPredicted RBP9.2□□□□□ -0.94
MRPL40P1-201ENST00000542687 CCDC194A0A1B0GVG4 234 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 KIF28PB7ZC32 967 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 GCOM1H8Y6P7 765 aaPredicted RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 SLC25A27O95847 323 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 CFBP00751 764 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 FOSP01100 380 aaPredicted RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 POLR2MP0CAP2 368 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 HSPA1AP0DMV8 641 aaKnown RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 HSPA1BP0DMV9 641 aaKnown RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 TAL1P17542 331 aaPredicted RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 COPB2P35606 906 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 TM4SF4P48230 202 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 NR5A1Q13285 461 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 NPY5RQ15761 445 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 FOXD4L6Q3SYB3 417 aaPredicted RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 JAKMIP3Q5VZ66 844 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 FOXD4L3Q6VB84 417 aaPredicted RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 KRT25Q7Z3Z0 450 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 REXO1Q8N1G1 1221 aaKnown RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 SAMD3Q8N6K7 520 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 CHST13Q8NET6 341 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 GPRC5AQ8NFJ5 357 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 ZNF396Q96N95 335 aaPredicted RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 SPATC1LQ9H0A9 340 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 HOMER2Q9NSB8 354 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 BTBD7Q9P203 1132 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 RBPJLQ9UBG7 517 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 ZNF214Q9UL59 606 aaPredicted RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 NOL7Q9UMY1 257 aaKnown RBP9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 PCDHA6Q9UN73 950 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 PCDHA8Q9Y5H6 950 aa9.19□□□□□ -0.94
MRPL40P1-201ENST00000542687 M0R2N6 131 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 IGF2BP3O00425 579 aaKnown RBP eCLIP9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 MEIS2O14770 477 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 CNMDO75829 334 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 ALDH1A1P00352 501 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 MYH8P13535 1937 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 CCNA1P78396 465 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 NONOQ15233 471 aaKnown RBP eCLIP9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 TAF1CQ15572 869 aaPredicted RBP9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 ATL3Q6DD88 541 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 USP17L6PQ6QN14 398 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 PIK3AP1Q6ZUJ8 805 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 NCAPG2Q86XI2 1143 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 RIOX2Q8IUF8 465 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 CCAR1Q8IX12 1150 aaKnown RBP9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 ANKRD13CQ8N6S4 541 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 CLEC4DQ8WXI8 215 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 TNFRSF25Q93038 417 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 GBP4Q96PP9 640 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 MOV10L1Q9BXT6 1211 aaKnown RBP9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 MAF1Q9H063 256 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 ACAD9Q9H845 621 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 ZFYVE28Q9HCC9 887 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 RNF146Q9NTX7 359 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 TMEM260Q9NX78 707 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 MAP3K20Q9NYL2 800 aaKnown RBP9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 FBXO40Q9UH90 709 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 CFAP45Q9UL16 551 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 RIPK3Q9Y572 518 aa9.18□□□□□ -0.94
MRPL40P1-201ENST00000542687 SPDYE3A6NKU9 549 aa9.17□□□□□ -0.94
MRPL40P1-201ENST00000542687 NFIBO00712 420 aa9.17□□□□□ -0.94
MRPL40P1-201ENST00000542687 PEX10O60683 326 aa9.17□□□□□ -0.94
MRPL40P1-201ENST00000542687 AOC2O75106 756 aa9.17□□□□□ -0.94
MRPL40P1-201ENST00000542687 NCLP19338 710 aaKnown RBP9.17□□□□□ -0.94
MRPL40P1-201ENST00000542687 ATP2B1P20020 1258 aa9.17□□□□□ -0.94
MRPL40P1-201ENST00000542687 HOXA13P31271 388 aaPredicted RBP9.17□□□□□ -0.94
MRPL40P1-201ENST00000542687 MAP2K2P36507 400 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms