RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 CLEC4DQ8WXI8 215 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 MTMR8Q96EF0 704 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 UBA5Q9GZZ9 404 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 MAF1Q9H063 256 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 CPVLQ9H3G5 476 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 CYP39A1Q9NYL5 469 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 KLRF2D3W0D1 207 aa15.28■□□□□ 0.04
LTBR-208ENST00000541005 POTEB2H3BUK9 544 aa15.28■□□□□ 0.04
LTBR-208ENST00000541005 TAL1P17542 331 aaPredicted RBP15.28■□□□□ 0.04
LTBR-208ENST00000541005 HSPA4P34932 840 aa15.28■□□□□ 0.04
LTBR-208ENST00000541005 JMJD4Q9H9V9 463 aa15.28■□□□□ 0.04
LTBR-208ENST00000541005 ASTN1O14525 1302 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 LOC102724159A0A0B4J2E5 919 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 NFIBO00712 420 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 SNAI1O95863 264 aaPredicted RBP15.27■□□□□ 0.04
LTBR-208ENST00000541005 ZNF865P0CJ78 1059 aaPredicted RBP15.27■□□□□ 0.04
LTBR-208ENST00000541005 CNTN2Q02246 1040 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 PWP2Q15269 919 aaKnown RBP15.27■□□□□ 0.04
LTBR-208ENST00000541005 SLC35G1Q2M3R5 365 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 QRICH1Q2TAL8 776 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 SGMS1Q86VZ5 419 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 ZNF654Q8IZM8 581 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 NEK1Q96PY6 1258 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 RIOX1Q9H6W3 641 aa15.27■□□□□ 0.04
LTBR-208ENST00000541005 GPHNQ9NQX3 736 aaPredicted RBP15.27■□□□□ 0.04
LTBR-208ENST00000541005 ABCB11O95342 1321 aa15.26■□□□□ 0.03
LTBR-208ENST00000541005 SOWAHBA6NEL2 793 aa15.26■□□□□ 0.03
LTBR-208ENST00000541005 EXOSC10Q01780 885 aaKnown RBP15.26■□□□□ 0.03
LTBR-208ENST00000541005 ADCK5Q3MIX3 580 aa15.26■□□□□ 0.03
LTBR-208ENST00000541005 PRAMEF19Q5SWL8 479 aa15.26■□□□□ 0.03
LTBR-208ENST00000541005 ARMCX2Q7L311 632 aa15.26■□□□□ 0.03
LTBR-208ENST00000541005 DHX32Q7L7V1 743 aaKnown RBP15.26■□□□□ 0.03
LTBR-208ENST00000541005 RGS22Q8NE09 1264 aa15.26■□□□□ 0.03
LTBR-208ENST00000541005 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
LTBR-208ENST00000541005 DIS3LQ8TF46 1054 aaKnown RBP15.26■□□□□ 0.03
LTBR-208ENST00000541005 KATNBL1Q9H079 304 aa15.26■□□□□ 0.03
LTBR-208ENST00000541005 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.26■□□□□ 0.03
LTBR-208ENST00000541005 CNPY2Q9Y2B0 182 aa15.26■□□□□ 0.03
LTBR-208ENST00000541005 ASB14A6NK59 587 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 HMGB1P09429 215 aaKnown RBP15.25■□□□□ 0.03
LTBR-208ENST00000541005 COL6A1P12109 1028 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 AKR1A1P14550 325 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 SMARCA1P28370 1054 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 CNGA1P29973 690 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 NSMFQ6X4W1 530 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 NECAB2Q7Z6G3 386 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 CCDC144CPQ8IYA2 1237 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 PAWRQ96IZ0 340 aaKnown RBP15.25■□□□□ 0.03
LTBR-208ENST00000541005 HTATIP2Q9BUP3 242 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 ABHD16BQ9H3Z7 469 aa15.25■□□□□ 0.03
LTBR-208ENST00000541005 DNM1LO00429 736 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 ZBTB5O15062 677 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 CYTH3O43739 400 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
LTBR-208ENST00000541005 CALM1P0DP23 149 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 CALM2P0DP24 149 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 CALM3P0DP25 149 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 KIF5BP33176 963 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 GHRHRQ02643 423 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 BAATQ14032 418 aaPredicted RBP15.24■□□□□ 0.03
LTBR-208ENST00000541005 USH1GQ495M9 461 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 SLC30A10Q6XR72 485 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 RNF207Q6ZRF8 634 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 FBXO11Q86XK2 927 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 CTCFLQ8NI51 663 aaPredicted RBP15.24■□□□□ 0.03
LTBR-208ENST00000541005 SPZ1Q9BXG8 430 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 AMNQ9BXJ7 453 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 ADD3Q9UEY8 706 aaKnown RBP15.24■□□□□ 0.03
LTBR-208ENST00000541005 SNX14Q9Y5W7 946 aa15.24■□□□□ 0.03
LTBR-208ENST00000541005 CCDC69A6NI79 296 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 PPP1R11O60927 126 aaPredicted RBP15.23■□□□□ 0.03
LTBR-208ENST00000541005 RARBP10826 455 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 GNAQP50148 359 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 RPS6P62753 249 aaKnown RBP15.23■□□□□ 0.03
LTBR-208ENST00000541005 ACVR2BQ13705 512 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 PRPF38BQ5VTL8 546 aaKnown RBP15.23■□□□□ 0.03
LTBR-208ENST00000541005 NFXL1Q6ZNB6 911 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 NUP133Q8WUM0 1156 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 LZTS2Q9BRK4 669 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 MYL10Q9BUA6 226 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 LRRC2Q9BYS8 371 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 C11orf49Q9H6J7 331 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 MRPL11Q9Y3B7 192 aaKnown RBP15.23■□□□□ 0.03
LTBR-208ENST00000541005 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 MYH7BA7E2Y1 1941 aa15.23■□□□□ 0.03
LTBR-208ENST00000541005 PTPDC1A2A3K4 754 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 ALDH5A1P51649 535 aaPredicted RBP15.22■□□□□ 0.03
LTBR-208ENST00000541005 RCAN1P53805 252 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 TRAF1Q13077 416 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 APOA5Q6Q788 366 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 MCF2L2Q86YR7 1114 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 FBXL16Q8N461 479 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 ARRDC4Q8NCT1 418 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 DNERQ8NFT8 737 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 VAT1LQ9HCJ6 419 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 ZHX1Q9UKY1 873 aaPredicted RBP15.22■□□□□ 0.03
LTBR-208ENST00000541005 FAM184BQ9ULE4 1060 aa15.22■□□□□ 0.03
LTBR-208ENST00000541005 PNMA6FA0A0J9YX94 578 aa15.21■□□□□ 0.03
LTBR-208ENST00000541005 OPLAHO14841 1288 aa15.21■□□□□ 0.03
LTBR-208ENST00000541005 EDNRBP24530 442 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms