RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 KRT86O43790 486 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 DDAH1O94760 285 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 CALM1P0DP23 149 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 CALM2P0DP24 149 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 CALM3P0DP25 149 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 TBC1D8BQ0IIM8 1120 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 FAM182BQ5T319 152 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 TTC19Q6DKK2 380 aaPredicted RBP22.69■■□□□ 1.22
TMEM260-203ENST00000539559 BLIDQ8IZY5 108 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 DUSP9Q99956 384 aaKnown RBP22.69■■□□□ 1.22
TMEM260-203ENST00000539559 CRACR2AQ9BSW2 395 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 LRWD1Q9UFC0 647 aa22.69■■□□□ 1.22
TMEM260-203ENST00000539559 ZNF263O14978 683 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 KLRK1P26718 216 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 HSPA1LP34931 641 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 SLC7A5Q01650 507 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 INF2Q27J81 1249 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 TTI2Q6NXR4 508 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 RGL2O15211 777 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 TUBBP07437 444 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 CXCR5P32302 372 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 C3orf67Q6ZVT6 689 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 MLXIPQ9HAP2 919 aa22.68■■□□□ 1.22
TMEM260-203ENST00000539559 LONP1P36776 959 aaKnown RBP22.67■■□□□ 1.22
TMEM260-203ENST00000539559 NOP2P46087 812 aaKnown RBP22.67■■□□□ 1.22
TMEM260-203ENST00000539559 KRT83P78385 493 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 CCNI2Q6ZMN8 369 aaPredicted RBP22.67■■□□□ 1.22
TMEM260-203ENST00000539559 DTHD1Q6ZMT9 781 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 EXOC1Q9NV70 894 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 AFF2P51816 1311 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 TSPY2A6NKD2 308 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 PSMA7O14818 248 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 FCER1AP12319 257 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 MAP9Q49MG5 647 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 CCDC178Q5BJE1 867 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 ANKRD40Q6AI12 368 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 VIPAS39Q9H9C1 493 aa22.67■■□□□ 1.22
TMEM260-203ENST00000539559 A0A1W2PQC6 194 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 SRGNP10124 158 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 UBA7P41226 1012 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 DNAJC21Q5F1R6 531 aaKnown RBP22.66■■□□□ 1.22
TMEM260-203ENST00000539559 TTYH3Q9C0H2 523 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 KAT14Q9H8E8 782 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 MKRN1Q9UHC7 482 aaKnown RBP22.66■■□□□ 1.22
TMEM260-203ENST00000539559 DMGDHQ9UI17 866 aaKnown RBP22.66■■□□□ 1.22
TMEM260-203ENST00000539559 CAPN6Q9Y6Q1 641 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 RPS6KA4O75676 772 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 EEF1GP26641 437 aaKnown RBP22.66■■□□□ 1.22
TMEM260-203ENST00000539559 CYLC1P35663 651 aaPredicted RBP22.66■■□□□ 1.22
TMEM260-203ENST00000539559 TRAPPC10P48553 1259 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 DNM2P50570 870 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 MEA1Q16626 185 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 CPVLQ9H3G5 476 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 CCNL1Q9UK58 526 aaPredicted RBP22.66■■□□□ 1.22
TMEM260-203ENST00000539559 TAF1P21675 1872 aa22.66■■□□□ 1.22
TMEM260-203ENST00000539559 MTIF2P46199 727 aaKnown RBP22.65■■□□□ 1.22
TMEM260-203ENST00000539559 STK4Q13043 487 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 CCDC96Q2M329 555 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 SND1Q7KZF4 910 aaKnown RBP eCLIP22.65■■□□□ 1.22
TMEM260-203ENST00000539559 CNOT6LQ96LI5 555 aaKnown RBP22.65■■□□□ 1.22
TMEM260-203ENST00000539559 LRRC1Q9BTT6 524 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 BRIP1Q9BX63 1249 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 THAP9Q9H5L6 903 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 POLD4Q9HCU8 107 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.65■■□□□ 1.22
TMEM260-203ENST00000539559 MAGEA9P43362 315 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 ZNHIT6Q9NWK9 470 aaKnown RBP22.65■■□□□ 1.22
TMEM260-203ENST00000539559 BTAF1O14981 1849 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 NHSQ6T4R5 1651 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 CCDC194A0A1B0GVG4 234 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 EPHB6O15197 1021 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 PPFIA4O75335 1185 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 IPO7O95373 1038 aaKnown RBP22.65■■□□□ 1.22
TMEM260-203ENST00000539559 CKAP4Q07065 602 aaKnown RBP22.65■■□□□ 1.22
TMEM260-203ENST00000539559 ARL6IP4Q66PJ3 421 aaKnown RBP22.65■■□□□ 1.22
TMEM260-203ENST00000539559 RCSD1Q6JBY9 416 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 ANKRD13CQ8N6S4 541 aa22.65■■□□□ 1.22
TMEM260-203ENST00000539559 GIMAP8Q8ND71 665 aaPredicted RBP22.65■■□□□ 1.22
TMEM260-203ENST00000539559 MOCS3O95396 460 aa22.64■■□□□ 1.21
TMEM260-203ENST00000539559 ATP2B2Q01814 1243 aa22.64■■□□□ 1.21
TMEM260-203ENST00000539559 PYM1Q9BRP8 204 aaKnown RBP22.64■■□□□ 1.21
TMEM260-203ENST00000539559 DCP1AQ9NPI6 582 aaPredicted RBP22.64■■□□□ 1.21
TMEM260-203ENST00000539559 CACNA1SQ13698 1873 aa22.64■■□□□ 1.21
TMEM260-203ENST00000539559 PLCG1P19174 1290 aa22.64■■□□□ 1.21
TMEM260-203ENST00000539559 CORO7P57737 925 aa22.64■■□□□ 1.21
TMEM260-203ENST00000539559 PDE4DQ08499 809 aa22.64■■□□□ 1.21
TMEM260-203ENST00000539559 NOC4LQ9BVI4 516 aaKnown RBP22.64■■□□□ 1.21
TMEM260-203ENST00000539559 NARFQ9UHQ1 456 aa22.64■■□□□ 1.21
TMEM260-203ENST00000539559 TRPC5Q9UL62 973 aaPredicted RBP22.64■■□□□ 1.21
TMEM260-203ENST00000539559 MYH10P35580 1976 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 GOLGA6BA6NDN3 693 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 GNPATO15228 680 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 ONECUT3O60422 494 aaPredicted RBP22.63■■□□□ 1.21
TMEM260-203ENST00000539559 SLC35G1Q2M3R5 365 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 ERFEQ4G0M1 354 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 NFRKBQ6P4R8 1299 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 SECISBP2LQ93073 1101 aaKnown RBP22.63■■□□□ 1.21
TMEM260-203ENST00000539559 TARSL2A2RTX5 802 aaKnown RBP22.63■■□□□ 1.21
TMEM260-203ENST00000539559 GOLGA6CA6NDK9 693 aa22.63■■□□□ 1.21
TMEM260-203ENST00000539559 NCK2O43639 380 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms