RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 PPIL6Q8IXY8 311 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 ZNF655Q8N720 491 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-210ENST00000539303 GSTCDQ8NEC7 633 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 NPLOC4Q8TAT6 608 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 ATP13A1Q9HD20 1204 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 SEMA3GQ9NS98 782 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 AP5S1Q9NUS5 200 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 ZC3H7BQ9UGR2 993 aaKnown RBP4.46□□□□□ -1.7
SNHG1-210ENST00000539303 NOP58Q9Y2X3 529 aaKnown RBP4.46□□□□□ -1.7
SNHG1-210ENST00000539303 PCDHA9Q9Y5H5 950 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 PCDHA11Q9Y5I1 949 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 BACE2Q9Y5Z0 518 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 DNAJC25-GNG10A0A024R161 153 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 TMEM82A0PJX8 343 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 PRR19A6NJB7 356 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 RAB11FIP3O75154 756 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 ZNF205O95201 554 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 CNGA1P29973 690 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 BMP8BP34820 402 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 POU4F1Q01851 419 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 CYP27A1Q02318 531 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 INF2Q27J81 1249 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 GAB4Q2WGN9 574 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 NKAPLQ5M9Q1 402 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 STRA8Q7Z7C7 330 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 TMEM151AQ8N4L1 468 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 STAG1Q8WVM7 1258 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 PTPRN2Q92932 1015 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 ATG3Q9NT62 314 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 GPATCH2Q9NW75 528 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 FBXL7Q9UJT9 491 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 TCFL5Q9UL49 500 aa4.45□□□□□ -1.7
SNHG1-210ENST00000539303 CYP26A1O43174 497 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 KCNQ2O43526 872 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 CRTAMO95727 393 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 TGFB1P01137 390 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 ESR1P03372 595 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 IBSPP21815 317 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-210ENST00000539303 CEBPAP49715 358 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-210ENST00000539303 ANAPC15P60006 121 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 GABREP78334 506 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 PCBP1Q15365 356 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNHG1-210ENST00000539303 SEPT7Q16181 437 aaKnown RBP4.44□□□□□ -1.7
SNHG1-210ENST00000539303 SKOR2Q2VWA4 1001 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-210ENST00000539303 STYK1Q6J9G0 422 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 PKN3Q6P5Z2 889 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 ABHD17CQ6PCB6 329 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 KRT26Q7Z3Y9 468 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 CPNE8Q86YQ8 564 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 ENOX1Q8TC92 643 aaKnown RBP4.44□□□□□ -1.7
SNHG1-210ENST00000539303 PHF20Q9BVI0 1012 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 CDADC1Q9BWV3 514 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 PPARGC1AQ9UBK2 798 aaKnown RBP4.44□□□□□ -1.7
SNHG1-210ENST00000539303 DUSP13Q9UII6 198 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 PCDHA8Q9Y5H6 950 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 PITPNM2Q9BZ72 1349 aa4.44□□□□□ -1.7
SNHG1-210ENST00000539303 TCRBV16S1A1N1A0A5B0 115 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 FGF10O15520 208 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-210ENST00000539303 MEFVO15553 781 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-210ENST00000539303 DYRK3O43781 588 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 OPA1O60313 960 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 KPNA6O60684 536 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 CPP00450 1065 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 LTKP29376 864 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 SEPHS1P49903 392 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 TEKQ02763 1124 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 TAF7LQ5H9L4 462 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 LHFPL2Q6ZUX7 228 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 CREG2Q8IUH2 290 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 LINC00116Q8NCU8 138 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 TMEM52Q8NDY8 209 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 ZCRB1Q8TBF4 217 aaKnown RBP4.43□□□□□ -1.7
SNHG1-210ENST00000539303 CHAC2Q8WUX2 184 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 DDX1Q92499 740 aaKnown RBP4.43□□□□□ -1.7
SNHG1-210ENST00000539303 CCDC140Q96MF4 163 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 SPOCK3Q9BQ16 436 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 METTL22Q9BUU2 404 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-210ENST00000539303 BRINP2Q9C0B6 783 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 MTFR1LQ9H019 292 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 TRIT1Q9H3H1 467 aaKnown RBP4.43□□□□□ -1.7
SNHG1-210ENST00000539303 MAGEC2Q9UBF1 373 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-210ENST00000539303 EBF1Q9UH73 591 aa4.43□□□□□ -1.7
SNHG1-210ENST00000539303 H2AFB1P0C5Y9 115 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 H2AFB2P0C5Z0 115 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 JMJD7P0C870 316 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 KCNA6P17658 529 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 RPL10P27635 214 aaKnown RBP4.42□□□□□ -1.7
SNHG1-210ENST00000539303 CLCN7P51798 805 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 PCBP3P57721 371 aaKnown RBP4.42□□□□□ -1.7
SNHG1-210ENST00000539303 EGR3Q06889 387 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 BNIP3Q12983 259 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 LAPTM5Q13571 262 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 FAM50AQ14320 339 aaKnown RBP4.42□□□□□ -1.7
SNHG1-210ENST00000539303 IFI16Q16666 785 aaKnown RBP4.42□□□□□ -1.7
SNHG1-210ENST00000539303 RCSD1Q6JBY9 416 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 MAMDC2Q7Z304 686 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-210ENST00000539303 MTDHQ86UE4 582 aaKnown RBP4.42□□□□□ -1.7
SNHG1-210ENST00000539303 DDX42Q86XP3 938 aaKnown RBP eCLIP4.42□□□□□ -1.77e-6■■■□□ 16.5
SNHG1-210ENST00000539303 PRPF38AQ8NAV1 312 aaKnown RBP4.42□□□□□ -1.7
SNHG1-210ENST00000539303 RCBTB1Q8NDN9 531 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms