RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 PI16Q6UXB8 463 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 SYCE1Q8N0S2 351 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 ANKRD13CQ8N6S4 541 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 CCDC197Q8NCU1 140 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 TBC1D5Q92609 795 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 NFU1Q9UMS0 254 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 CCNT1O60563 726 aaKnown RBP7.56□□□□□ -1.2
SCAPER-203ENST00000538941 PDE8AO60658 829 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 PCCAP05165 728 aaPredicted RBP7.56□□□□□ -1.2
SCAPER-203ENST00000538941 CDC25AP30304 524 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 E2F5Q15329 346 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 NLRP14Q86W24 1093 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 CCDC63Q8NA47 563 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 MAP3K14Q99558 947 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 VAT1LQ9HCJ6 419 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 NLRC4Q9NPP4 1024 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 CAPN11Q9UMQ6 739 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 G3V3G9 751 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 PRPF3O43395 683 aaKnown RBP7.56□□□□□ -1.2
SCAPER-203ENST00000538941 GBP1P32455 592 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 RFX5P48382 616 aaPredicted RBP7.56□□□□□ -1.2
SCAPER-203ENST00000538941 RCAN1P53805 252 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 DCAF8Q5TAQ9 597 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 FOXR1Q6PIV2 292 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 TRAPPC11Q7Z392 1133 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 LMNTD2Q8IXW0 634 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 FBXL16Q8N461 479 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 OSBPL9Q96SU4 736 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 KLC4Q9NSK0 619 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 GDAQ9Y2T3 454 aa7.56□□□□□ -1.2
SCAPER-203ENST00000538941 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.56□□□□□ -1.2
SCAPER-203ENST00000538941 A0A0G2JLW4 131 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 EIF4A3P38919 411 aaKnown RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 SETDB1Q15047 1291 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 CLUL1Q15846 466 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 DENND2CQ68D51 928 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 KRT25Q7Z3Z0 450 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 PEX26Q7Z412 305 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 TBC1D31Q96DN5 1066 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 RRP36Q96EU6 259 aaKnown RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 KAZALD1Q96I82 304 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 CHP1Q99653 195 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 CNOT10Q9H9A5 744 aaKnown RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 TCEAL9Q9UHQ7 104 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 SUFUQ9UMX1 484 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 TECPR2O15040 1411 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 FRMD3A2A2Y4 597 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 KRIT1O00522 736 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 FLOT1O75955 427 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 CCNE1P24864 410 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 AARSP49588 968 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 DPYDQ12882 1025 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 CCDC6Q16204 474 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 SPTY2D1Q68D10 685 aaPredicted RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 ATG9AQ7Z3C6 839 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 DAAM2Q86T65 1068 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 OXER1Q8TDS5 423 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 LSM14BQ9BX40 385 aaKnown RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 PLVAPQ9BX97 442 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 TRIM31Q9BZY9 425 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 EPN3Q9H201 632 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 ZNF652Q9Y2D9 606 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 MYCNP04198 464 aaPredicted RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 RPSAP08865 295 aaKnown RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 ERCC3P19447 782 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 CTSWP56202 376 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 EHHADHQ08426 723 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 PPP2R5AQ15172 486 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 SLC4A8Q2Y0W8 1093 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 ARL6IP4Q66PJ3 421 aaKnown RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 CCDC65Q8IXS2 484 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 ZBTB38Q8NAP3 1195 aaPredicted RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 SPATA4Q8NEY3 305 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 ATP6V1G3Q96LB4 118 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 CCDC77Q9BR77 488 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.55□□□□□ -1.25e-7■■■■□ 20.9
SCAPER-203ENST00000538941 SNX12Q9UMY4 172 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 PLAAQ9Y263 795 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 A0A1W2PRG0 241 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 LAD1O00515 517 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 RGS16O15492 202 aaPredicted RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 GNA14O95837 355 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 CLTAP09496 248 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 PRCPP42785 496 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 ERVK-24P63145 666 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 ATP2B2Q01814 1243 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 IKQ13123 557 aaPredicted RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 NONOQ15233 471 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 NBPF9Q3BBW0 867 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 INTS8Q75QN2 995 aaKnown RBP7.55□□□□□ -1.2
SCAPER-203ENST00000538941 PARP9Q8IXQ6 854 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 MICAL1Q8TDZ2 1067 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 DDX12PQ92771 950 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 LRRC1Q9BTT6 524 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 KCNK9Q9NPC2 374 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 TRIM10Q9UDY6 481 aa7.55□□□□□ -1.2
SCAPER-203ENST00000538941 TRIM49BA6NDI0 452 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 PPP1R37O75864 691 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 LUC7L3O95232 432 aaKnown RBP7.54□□□□□ -1.2
SCAPER-203ENST00000538941 PHKA1P46020 1223 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms