RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 GSDMAQ96QA5 445 aa23.1■■□□□ 1.29
DDX55-205ENST00000538744 NUP88Q99567 741 aaPredicted RBP23.1■■□□□ 1.29
DDX55-205ENST00000538744 CCSER1Q9C0I3 900 aa23.1■■□□□ 1.29
DDX55-205ENST00000538744 DISC1Q9NRI5 854 aa23.1■■□□□ 1.29
DDX55-205ENST00000538744 A0A1W2PRG0 241 aa23.09■■□□□ 1.29
DDX55-205ENST00000538744 STAT6P42226 847 aa23.09■■□□□ 1.29
DDX55-205ENST00000538744 UBE2SQ16763 222 aa23.09■■□□□ 1.29
DDX55-205ENST00000538744 SYDE2Q5VT97 1194 aa23.09■■□□□ 1.29
DDX55-205ENST00000538744 BTNL9Q6UXG8 535 aa23.09■■□□□ 1.29
DDX55-205ENST00000538744 PCDHA1Q9Y5I3 950 aa23.09■■□□□ 1.29
DDX55-205ENST00000538744 GTPBP6O43824 516 aaPredicted RBP23.08■■□□□ 1.29
DDX55-205ENST00000538744 IKQ13123 557 aaPredicted RBP23.08■■□□□ 1.29
DDX55-205ENST00000538744 KARSQ15046 597 aaKnown RBP23.08■■□□□ 1.29
DDX55-205ENST00000538744 GOPCQ9HD26 462 aa23.08■■□□□ 1.29
DDX55-205ENST00000538744 MYH7BA7E2Y1 1941 aa23.08■■□□□ 1.28
DDX55-205ENST00000538744 TMEM232C9JQI7 657 aa23.08■■□□□ 1.28
DDX55-205ENST00000538744 CDC25AP30304 524 aa23.08■■□□□ 1.28
DDX55-205ENST00000538744 CT47A1Q5JQC4 288 aaPredicted RBP23.08■■□□□ 1.28
DDX55-205ENST00000538744 RASSF8Q8NHQ8 419 aa23.08■■□□□ 1.28
DDX55-205ENST00000538744 PGAP2Q9UHJ9 254 aa23.08■■□□□ 1.28
DDX55-205ENST00000538744 TMX2Q9Y320 296 aa23.08■■□□□ 1.28
DDX55-205ENST00000538744 ATAD5Q96QE3 1844 aa23.07■■□□□ 1.28
DDX55-205ENST00000538744 SHTN1A0MZ66 631 aa23.07■■□□□ 1.28
DDX55-205ENST00000538744 PP2D1A8MPX8 630 aa23.07■■□□□ 1.28
DDX55-205ENST00000538744 PTGS1P23219 599 aa23.07■■□□□ 1.28
DDX55-205ENST00000538744 LMOD1P29536 600 aaPredicted RBP23.07■■□□□ 1.28
DDX55-205ENST00000538744 RRAGBQ5VZM2 374 aa23.07■■□□□ 1.28
DDX55-205ENST00000538744 CCDC186Q7Z3E2 898 aa23.07■■□□□ 1.28
DDX55-205ENST00000538744 POTEDQ86YR6 584 aa23.07■■□□□ 1.28
DDX55-205ENST00000538744 CDAN1Q8IWY9 1227 aa23.07■■□□□ 1.28
DDX55-205ENST00000538744 AMNQ9BXJ7 453 aa23.07■■□□□ 1.28
DDX55-205ENST00000538744 MAP3K10Q02779 954 aa23.06■■□□□ 1.28
DDX55-205ENST00000538744 CALCRLQ16602 461 aa23.06■■□□□ 1.28
DDX55-205ENST00000538744 HSD3B7Q9H2F3 369 aa23.06■■□□□ 1.28
DDX55-205ENST00000538744 CASP1P29466 404 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 CAP2P40123 477 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 ECE1P42892 770 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 PTGER2P43116 358 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 RASSF7Q02833 373 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 TNFAIP1Q13829 316 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 PPP4R3AQ6IN85 833 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 MIGA2Q7L4E1 593 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 CABP7Q86V35 215 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 FBXO11Q86XK2 927 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 MTMR9Q96QG7 549 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 NAP1L4Q99733 375 aaKnown RBP23.05■■□□□ 1.28
DDX55-205ENST00000538744 KCNF1Q9H3M0 494 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 SH2D4AQ9H788 454 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 TDP2O95551 362 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 ERCC5P28715 1186 aaPredicted RBP23.05■■□□□ 1.28
DDX55-205ENST00000538744 MCTP2Q6DN12 878 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 ENOX1Q8TC92 643 aaKnown RBP23.05■■□□□ 1.28
DDX55-205ENST00000538744 ACER1Q8TDN7 264 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 STAMQ92783 540 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 CUEDC2Q9H467 287 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 IFNKQ9P0W0 207 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 NRBP1Q9UHY1 535 aa23.05■■□□□ 1.28
DDX55-205ENST00000538744 EDIL3O43854 480 aa23.04■■□□□ 1.28
DDX55-205ENST00000538744 GCFC2P16383 781 aaKnown RBP23.04■■□□□ 1.28
DDX55-205ENST00000538744 FANCCQ00597 558 aa23.04■■□□□ 1.28
DDX55-205ENST00000538744 TMEM266Q2M3C6 531 aa23.04■■□□□ 1.28
DDX55-205ENST00000538744 SPICE1Q8N0Z3 855 aa23.04■■□□□ 1.28
DDX55-205ENST00000538744 IGSF22Q8N9C0 903 aa23.04■■□□□ 1.28
DDX55-205ENST00000538744 DPF2Q92785 391 aa23.04■■□□□ 1.28
DDX55-205ENST00000538744 MTRQ99707 1265 aa23.04■■□□□ 1.28
DDX55-205ENST00000538744 XPO4Q9C0E2 1151 aaKnown RBP23.04■■□□□ 1.28
DDX55-205ENST00000538744 MAGEF1Q9HAY2 307 aa23.04■■□□□ 1.28
DDX55-205ENST00000538744 SLC37A4O43826 429 aa23.03■■□□□ 1.28
DDX55-205ENST00000538744 TECP42680 631 aa23.03■■□□□ 1.28
DDX55-205ENST00000538744 GMPSP49915 693 aaPredicted RBP23.03■■□□□ 1.28
DDX55-205ENST00000538744 FXR2P51116 673 aaKnown RBP eCLIP23.03■■□□□ 1.28
DDX55-205ENST00000538744 STAT2P52630 851 aa23.03■■□□□ 1.28
DDX55-205ENST00000538744 CUL4BQ13620 913 aa23.03■■□□□ 1.28
DDX55-205ENST00000538744 RASA3Q14644 834 aa23.03■■□□□ 1.28
DDX55-205ENST00000538744 NAALADL2Q58DX5 795 aa23.03■■□□□ 1.28
DDX55-205ENST00000538744 BLZF1Q9H2G9 400 aa23.03■■□□□ 1.28
DDX55-205ENST00000538744 RMND1Q9NWS8 449 aa23.03■■□□□ 1.28
DDX55-205ENST00000538744 FZD9O00144 591 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 MYL1P05976 194 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 TXKP42681 527 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 FMR1Q06787 632 aaKnown RBP eCLIP23.02■■□□□ 1.28
DDX55-205ENST00000538744 AP3B2Q13367 1082 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 MICALL2Q8IY33 904 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 FANCLQ9NW38 375 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 PRR12Q9ULL5 1215 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 PSDA5PKW4 1024 aaPredicted RBP23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L15C9J2P7 530 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L13C9JLJ4 530 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L11C9JVI0 530 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L18D6R9N7 530 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L22D6RA61 530 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L17D6RBQ6 530 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L19D6RCP7 530 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L20D6RJB6 530 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 CBFA2T2O43439 604 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 ASNSP08243 561 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 ATP1A3P13637 1013 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 SNAP25P60880 206 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 USP17L24Q0WX57 530 aa23.02■■□□□ 1.28
DDX55-205ENST00000538744 TRAF1Q13077 416 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms