RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 MKRN1Q9UHC7 482 aaKnown RBP9.77□□□□□ -0.84
UBE3B-208ENST00000538070 SERPINB13Q9UIV8 391 aa9.77□□□□□ -0.84
UBE3B-208ENST00000538070 STX10O60499 249 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 CHRNA5P30532 468 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 TRAPPC10P48553 1259 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 TBC1D8BQ0IIM8 1120 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 E2F4Q16254 413 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 TCP11X2Q5H9J9 407 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 NT5DC1Q5TFE4 455 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 ZNF658Q5TYW1 1059 aaPredicted RBP9.77□□□□□ -0.85
UBE3B-208ENST00000538070 NELFCDQ8IXH7 590 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 ZNF397Q8NF99 534 aaPredicted RBP9.77□□□□□ -0.85
UBE3B-208ENST00000538070 CAPZA3Q96KX2 299 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 PLCH1Q4KWH8 1693 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 DDX60Q8IY21 1712 aaKnown RBP9.77□□□□□ -0.85
UBE3B-208ENST00000538070 ERICH4A6NGS2 130 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 FANCGO15287 622 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 GYPCP04921 128 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 HLA-DOAP06340 250 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 PPP2R3AQ06190 1150 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 TRIM65Q6PJ69 517 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 SLC30A10Q6XR72 485 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 C16orf86Q6ZW13 317 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 MMRN2Q9H8L6 949 aa9.77□□□□□ -0.85
UBE3B-208ENST00000538070 SLC37A4O43826 429 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 PDHBP11177 359 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 ARID5AQ03989 594 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 NAALADL2Q58DX5 795 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 SH3RF1Q7Z6J0 888 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 KIAA1328Q86T90 577 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 LRRC15Q8TF66 581 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 FAM207AQ9NSI2 230 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-208ENST00000538070 PPP1R1BQ9UD71 204 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-208ENST00000538070 PARP3Q9Y6F1 533 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 SLC1A4P43007 532 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
UBE3B-208ENST00000538070 PPP4CP60510 307 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 FCHSD1Q86WN1 690 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 TMEM139Q8IV31 216 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 NOC3LQ8WTT2 800 aaKnown RBP9.76□□□□□ -0.85
UBE3B-208ENST00000538070 TBC1D22AQ8WUA7 517 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 PSMB7Q99436 277 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 NUDT12Q9BQG2 462 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 MTMR4Q9NYA4 1195 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 MYH15Q9Y2K3 1946 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 CHD4Q14839 1912 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 DUOX1Q9NRD9 1551 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 POLRMTO00411 1230 aaKnown RBP9.76□□□□□ -0.85
UBE3B-208ENST00000538070 MFAP3LO75121 409 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 CYP27A1Q02318 531 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 TMEM266Q2M3C6 531 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 ADGRF4Q8IZF3 695 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 SLC35F6Q8N357 371 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 C4orf32Q8N8J7 132 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 TEKT1Q969V4 418 aa9.76□□□□□ -0.85
UBE3B-208ENST00000538070 NOC4LQ9BVI4 516 aaKnown RBP9.76□□□□□ -0.85
UBE3B-208ENST00000538070 LUC7L2Q9Y383 392 aaKnown RBP9.76□□□□□ -0.85
UBE3B-208ENST00000538070 MYH6P13533 1939 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 CLRN2A0PK11 232 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 MACROD2A1Z1Q3 448 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 NKRFO15226 690 aaKnown RBP eCLIP9.75□□□□□ -0.85
UBE3B-208ENST00000538070 UBXN2AP68543 259 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 SYCP1Q15431 976 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 TMCO3Q6UWJ1 677 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 SV2BQ7L1I2 683 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 COL23A1Q86Y22 540 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-208ENST00000538070 CNGA4Q8IV77 575 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 CRACR2AQ9BSW2 395 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 RWDD2AQ9UIY3 292 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 CACNA1SQ13698 1873 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 TTC26A0AVF1 554 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 MEIS1O00470 390 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 CLCN6P51797 869 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 ARL6IP4Q66PJ3 421 aaKnown RBP9.75□□□□□ -0.85
UBE3B-208ENST00000538070 CDC42EP5Q6NZY7 148 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 GLIS3Q8NEA6 775 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 TDRD3Q9H7E2 651 aaKnown RBP9.75□□□□□ -0.85
UBE3B-208ENST00000538070 ADGRG1Q9Y653 693 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 IPO7O95373 1038 aaKnown RBP9.75□□□□□ -0.85
UBE3B-208ENST00000538070 STAT3P40763 770 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 TBX2Q13207 712 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-208ENST00000538070 KRT79Q5XKE5 535 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 ANKRD40Q6AI12 368 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 ANKRD13CQ8N6S4 541 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 SPATA20Q8TB22 786 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 TUBGCP2Q9BSJ2 902 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 PSTPIP2Q9H939 334 aa9.75□□□□□ -0.85
UBE3B-208ENST00000538070 NPHP3-ACAD11A0A0J9YXS1 232 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 TTLL1O95922 423 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 SEPT2Q15019 361 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 FKBP15Q5T1M5 1219 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 C2CD5Q86YS7 1000 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 CNOT6LQ96LI5 555 aaKnown RBP9.74□□□□□ -0.85
UBE3B-208ENST00000538070 GDAP1L1Q96MZ0 367 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 DEF6Q9H4E7 631 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 AGPAT5Q9NUQ2 364 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 ARGLU1Q9NWB6 273 aaPredicted RBP9.74□□□□□ -0.85
UBE3B-208ENST00000538070 NID2Q14112 1375 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 TCP10L2B9ZVM9 353 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms