RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 NECTIN1Q15223 517 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 LRRC41Q15345 812 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 CDC37Q16543 378 aaPredicted RBP16.68■□□□□ 0.26
UBE3B-206ENST00000536398 USH1GQ495M9 461 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 CREB3L3Q68CJ9 461 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 C7orf61Q8IZ16 206 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 KATNBL1Q9H079 304 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 DNAH12Q6ZR08 3092 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 ALPK3Q96L96 1907 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 DNM1LO00429 736 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 CDC45O75419 566 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 RARBP10826 455 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 AKR1A1P14550 325 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 ATN1P54259 1190 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-206ENST00000536398 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-206ENST00000536398 WTAPQ15007 396 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 SLC30A10Q6XR72 485 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 ARRDC4Q8NCT1 418 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 JMJD4Q9H9V9 463 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 XPNPEP3Q9NQH7 507 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 MAD2L2Q9UI95 211 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 COLQQ9Y215 455 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-206ENST00000536398 NR2E3Q9Y5X4 410 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 FRMPD3Q5JV73 1810 aa16.67■□□□□ 0.26
UBE3B-206ENST00000536398 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
UBE3B-206ENST00000536398 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-206ENST00000536398 DHX16O60231 1041 aaKnown RBP16.66■□□□□ 0.26
UBE3B-206ENST00000536398 PTGS1P23219 599 aa16.66■□□□□ 0.26
UBE3B-206ENST00000536398 QRICH1Q2TAL8 776 aa16.66■□□□□ 0.26
UBE3B-206ENST00000536398 CCDC144BQ3MJ40 725 aa16.66■□□□□ 0.26
UBE3B-206ENST00000536398 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
UBE3B-206ENST00000536398 TBC1D5Q92609 795 aa16.66■□□□□ 0.26
UBE3B-206ENST00000536398 FERMT2Q96AC1 680 aa16.66■□□□□ 0.26
UBE3B-206ENST00000536398 FAM184BQ9ULE4 1060 aa16.66■□□□□ 0.26
UBE3B-206ENST00000536398 ZMYND8Q9ULU4 1186 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-206ENST00000536398 WDR19Q8NEZ3 1342 aa16.66■□□□□ 0.26
UBE3B-206ENST00000536398 ERICH2A1L162 156 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 KLRF2D3W0D1 207 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 SYN1P17600 705 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 CALML3P27482 149 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 ADCYAP1R1P41586 468 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 GRM4Q14833 912 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 EEPD1Q7L9B9 569 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 ABHD16BQ9H3Z7 469 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 LY9Q9HBG7 655 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 PDGFCQ9NRA1 345 aa16.65■□□□□ 0.26
UBE3B-206ENST00000536398 MCM3APO60318 1980 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
UBE3B-206ENST00000536398 MYADML2A6NDP7 307 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 ASB14A6NK59 587 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 KBTBD13C9JR72 458 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 PRC1O43663 620 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 ADAMTS4O75173 837 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 RPS6P62753 249 aaKnown RBP16.64■□□□□ 0.25
UBE3B-206ENST00000536398 TROAPQ12815 778 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 TMEM63BQ5T3F8 832 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 RNF207Q6ZRF8 634 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 RASEFQ8IZ41 740 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 MYL10Q9BUA6 226 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 LRRC2Q9BYS8 371 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 CEP290O15078 2479 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
UBE3B-206ENST00000536398 PPP1R11O60927 126 aaPredicted RBP16.63■□□□□ 0.25
UBE3B-206ENST00000536398 ALDH5A1P51649 535 aaPredicted RBP16.63■□□□□ 0.25
UBE3B-206ENST00000536398 SART3Q15020 963 aaKnown RBP16.63■□□□□ 0.25
UBE3B-206ENST00000536398 HABP4Q5JVS0 413 aaKnown RBP16.63■□□□□ 0.25
UBE3B-206ENST00000536398 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
UBE3B-206ENST00000536398 LCTP09848 1927 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 RANBP2P49792 3224 aaKnown RBP16.62■□□□□ 0.25
UBE3B-206ENST00000536398 SH2B2O14492 632 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-206ENST00000536398 CYTH3O43739 400 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 DUSP11O75319 330 aaKnown RBP16.62■□□□□ 0.25
UBE3B-206ENST00000536398 MCM5P33992 734 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 CASC1Q6TDU7 716 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 SLC39A5Q6ZMH5 540 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 RNF180Q86T96 592 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 FBXO11Q86XK2 927 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 KLHDC9Q8NEP7 349 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 MORC4Q8TE76 937 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 NUP133Q8WUM0 1156 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 MTMR8Q96EF0 704 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 PPP4R2Q9NY27 417 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
UBE3B-206ENST00000536398 PNMA2Q9UL42 364 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 PHF24Q9UPV7 400 aa16.62■□□□□ 0.25
UBE3B-206ENST00000536398 RTP1P59025 263 aa16.61■□□□□ 0.25
UBE3B-206ENST00000536398 CCSAPQ6IQ19 270 aaPredicted RBP16.61■□□□□ 0.25
UBE3B-206ENST00000536398 CATIPQ7Z7H3 387 aa16.61■□□□□ 0.25
UBE3B-206ENST00000536398 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
UBE3B-206ENST00000536398 ZNF654Q8IZM8 581 aa16.61■□□□□ 0.25
UBE3B-206ENST00000536398 PIBF1Q8WXW3 757 aa16.61■□□□□ 0.25
UBE3B-206ENST00000536398 PIGSQ96S52 555 aa16.61■□□□□ 0.25
UBE3B-206ENST00000536398 PRO3102Q9H379 93 aa16.61■□□□□ 0.25
UBE3B-206ENST00000536398 RIOX1Q9H6W3 641 aa16.61■□□□□ 0.25
UBE3B-206ENST00000536398 COL20A1Q9P218 1284 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms