RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 ZNF214Q9UL59 606 aaPredicted RBP13.24□□□□□ -0.29
CDCA3-206ENST00000536241 KIF28PB7ZC32 967 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 ATP2A1O14983 1001 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 CNMDO75829 334 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 CALML3P27482 149 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 GNA11P29992 359 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 OAZ1P54368 228 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 SREBF2Q12772 1141 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 NOGQ13253 232 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 NR5A1Q13285 461 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 SAFBQ15424 915 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 SNRNP48Q6IEG0 339 aaKnown RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 DIS3L2Q8IYB7 885 aaKnown RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 BLIDQ8IZY5 108 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 MB21D1Q8N884 522 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 SMCR8Q8TEV9 937 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 TRERF1Q96PN7 1200 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 PSTPIP2Q9H939 334 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 PCDHA4Q9UN74 947 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 MRPL11Q9Y3B7 192 aaKnown RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 ESYT2A0FGR8 921 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 OPLAHO14841 1288 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 ABCB11O95342 1321 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 F13A1P00488 732 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 KRT2P35908 639 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 VEGFBP49765 207 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 MRPL12P52815 198 aaKnown RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 MUM1L1Q5H9M0 696 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 GALNT17Q6IS24 598 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 USP17L6PQ6QN14 398 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 FAM177A1Q8N128 213 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 RASGRP4Q8TDF6 673 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 RIC8AQ9NPQ8 531 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 BIN2Q9UBW5 565 aaPredicted RBP13.23□□□□□ -0.29
CDCA3-206ENST00000536241 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 RABGAP1Q9Y3P9 1069 aa13.23□□□□□ -0.29
CDCA3-206ENST00000536241 COL11A1P12107 1806 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-206ENST00000536241 U2AF2P26368 475 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDCA3-206ENST00000536241 ADCY7P51828 1080 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 RESTQ13127 1097 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 TAF1CQ15572 869 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-206ENST00000536241 NOM1Q5C9Z4 860 aaKnown RBP13.22□□□□□ -0.29
CDCA3-206ENST00000536241 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 RIOX2Q8IUF8 465 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 ANKRD13CQ8N6S4 541 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 DAGLBQ8NCG7 672 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 CLEC4DQ8WXI8 215 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 CUL5Q93034 780 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 PARK7Q99497 189 aaKnown RBP13.22□□□□□ -0.29
CDCA3-206ENST00000536241 SPATC1LQ9H0A9 340 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 FOXP1Q9H334 677 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-206ENST00000536241 ZSCAN16Q9H4T2 348 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-206ENST00000536241 BRMS1Q9HCU9 246 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 ZCCHC17Q9NP64 241 aaKnown RBP13.22□□□□□ -0.29
CDCA3-206ENST00000536241 TMEM260Q9NX78 707 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
CDCA3-206ENST00000536241 M0R2N6 131 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 NFIBO00712 420 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 MEIS2O14770 477 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 CFBP00751 764 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 GCLCP48506 637 aaPredicted RBP13.21□□□□□ -0.3
CDCA3-206ENST00000536241 UBE2SQ16763 222 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 EARS2Q5JPH6 523 aaKnown RBP13.21□□□□□ -0.3
CDCA3-206ENST00000536241 JAKMIP3Q5VZ66 844 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 GPRC5AQ8NFJ5 357 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 BICD2Q8TD16 824 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 MOV10L1Q9BXT6 1211 aaKnown RBP13.21□□□□□ -0.3
CDCA3-206ENST00000536241 R3HDMLQ9H3Y0 253 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 RNF146Q9NTX7 359 aa13.21□□□□□ -0.3
CDCA3-206ENST00000536241 HOXA13P31271 388 aaPredicted RBP13.2□□□□□ -0.3
CDCA3-206ENST00000536241 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
CDCA3-206ENST00000536241 C1QTNF8P60827 252 aa13.2□□□□□ -0.3
CDCA3-206ENST00000536241 ERVK-9P63128 1117 aa13.2□□□□□ -0.3
CDCA3-206ENST00000536241 ERVK-24P63145 666 aa13.2□□□□□ -0.3
CDCA3-206ENST00000536241 NCAPG2Q86XI2 1143 aa13.2□□□□□ -0.3
CDCA3-206ENST00000536241 GTF3C2Q8WUA4 911 aaPredicted RBP13.2□□□□□ -0.3
CDCA3-206ENST00000536241 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
CDCA3-206ENST00000536241 TNFRSF25Q93038 417 aa13.2□□□□□ -0.3
CDCA3-206ENST00000536241 CHAMP1Q96JM3 812 aa13.2□□□□□ -0.3
CDCA3-206ENST00000536241 GLT8D2Q9H1C3 349 aa13.2□□□□□ -0.3
CDCA3-206ENST00000536241 ZFYVE28Q9HCC9 887 aa13.2□□□□□ -0.3
CDCA3-206ENST00000536241 CPA4Q9UI42 421 aa13.2□□□□□ -0.3
CDCA3-206ENST00000536241 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 GCOM1H8Y6P7 765 aaPredicted RBP13.19□□□□□ -0.3
CDCA3-206ENST00000536241 POLR2MP0CAP2 368 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 ERCC3P19447 782 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 MAP2K2P36507 400 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 TKFCQ3LXA3 575 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 NSMFQ6X4W1 530 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 PIK3AP1Q6ZUJ8 805 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 MCF2L2Q86YR7 1114 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
CDCA3-206ENST00000536241 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms