RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TM6SF1Q9BZW5 370 aa26.43■■□□□ 1.82
SFSWAP-204ENST00000535399 PAK6Q9NQU5 681 aaPredicted RBP26.43■■□□□ 1.82
SFSWAP-204ENST00000535399 RPTORQ8N122 1335 aa26.42■■□□□ 1.82
SFSWAP-204ENST00000535399 NFIBO00712 420 aa26.42■■□□□ 1.82
SFSWAP-204ENST00000535399 GJB1P08034 283 aa26.42■■□□□ 1.82
SFSWAP-204ENST00000535399 USH1GQ495M9 461 aa26.42■■□□□ 1.82
SFSWAP-204ENST00000535399 AGXT2Q9BYV1 514 aa26.42■■□□□ 1.82
SFSWAP-204ENST00000535399 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.42■■□□□ 1.821e-7■■■□□ 17.2
SFSWAP-204ENST00000535399 CYP39A1Q9NYL5 469 aa26.42■■□□□ 1.82
SFSWAP-204ENST00000535399 PFASO15067 1338 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 BRCA2P51587 3418 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 ZBTB5O15062 677 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 PPP1R11O60927 126 aaPredicted RBP26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 PLEKHA8P1O95397 391 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 GNAQP50148 359 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 SYNE3Q6ZMZ3 975 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 RUFY3Q7L099 469 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 MICU3Q86XE3 530 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 FBXO11Q86XK2 927 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 CCDC144CPQ8IYA2 1237 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 FAM133AQ8N9E0 248 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 FANCBQ8NB91 859 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 SPZ1Q9BXG8 430 aa26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 HMX1Q9NP08 348 aaPredicted RBP26.41■■□□□ 1.82
SFSWAP-204ENST00000535399 KLF18A0A0U1RQI7 1052 aa26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 POTEB2H3BUK9 544 aa26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 EN2P19622 333 aaPredicted RBP26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 SMARCA1P28370 1054 aa26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 FGD1P98174 961 aa26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 CNTN2Q02246 1040 aa26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 NSMFQ6X4W1 530 aa26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 SRBD1Q8N5C6 995 aaKnown RBP26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 PIGSQ96S52 555 aa26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 LZTS2Q9BRK4 669 aa26.4■■□□□ 1.82
SFSWAP-204ENST00000535399 ABCB11O95342 1321 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 ZBTB43O43298 467 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 CCND3P30281 292 aaPredicted RBP26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 GJA8P48165 433 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 RGS19P49795 217 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 ANAPC15P60006 121 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 BAATQ14032 418 aaPredicted RBP26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 ZNF467Q7Z7K2 595 aaPredicted RBP26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 HOMER1Q86YM7 354 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 TRPV1Q8NER1 839 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 BRF1Q92994 677 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 IL17RAQ96F46 866 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 TINF2Q9BSI4 451 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 CYP46A1Q9Y6A2 500 aa26.39■■□□□ 1.82
SFSWAP-204ENST00000535399 SMCHD1A6NHR9 2005 aa26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 SOWAHBA6NEL2 793 aa26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 CYBAP13498 195 aa26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 APOBRQ0VD83 1088 aa26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 MAMDC4Q6UXC1 1216 aa26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 TMTC3Q6ZXV5 915 aa26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 MSL3Q8N5Y2 521 aaKnown RBP26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 DEFB118Q96PH6 123 aa26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 AMNQ9BXJ7 453 aa26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 UPF3BQ9BZI7 483 aaKnown RBP26.38■■□□□ 1.81
SFSWAP-204ENST00000535399 RCAN1P53805 252 aa26.37■■□□□ 1.81
SFSWAP-204ENST00000535399 CMTR1Q8N1G2 835 aaKnown RBP26.37■■□□□ 1.81
SFSWAP-204ENST00000535399 U2AF1L4Q8WU68 220 aaKnown RBP26.37■■□□□ 1.81
SFSWAP-204ENST00000535399 SHISA4Q96DD7 197 aa26.37■■□□□ 1.81
SFSWAP-204ENST00000535399 ASTN1O14525 1302 aa26.37■■□□□ 1.81
SFSWAP-204ENST00000535399 ZNFX1Q9P2E3 1918 aaKnown RBP26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 PNMA6FA0A0J9YX94 578 aa26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 SGPL1O95470 568 aa26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 RTN1Q16799 776 aa26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 PRAMEF19Q5SWL8 479 aa26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 SLC30A10Q6XR72 485 aa26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 RGS22Q8NE09 1264 aa26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 PURBQ96QR8 312 aaKnown RBP26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 FAM217BQ9NTX9 383 aaPredicted RBP26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 MRPL11Q9Y3B7 192 aaKnown RBP26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 SYNGAP1Q96PV0 1343 aa26.36■■□□□ 1.81
SFSWAP-204ENST00000535399 PTPDC1A2A3K4 754 aa26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 GOLGA8AA7E2F4 631 aa26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 GOLGA8BA8MQT2 603 aa26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 RPS6P62753 249 aaKnown RBP26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 TOB2Q14106 344 aaPredicted RBP26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 RNF207Q6ZRF8 634 aa26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 PIBF1Q8WXW3 757 aa26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 CRISPLD2Q9H0B8 497 aa26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 RBM28Q9NW13 759 aaKnown RBP26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 NRBP1Q9UHY1 535 aa26.35■■□□□ 1.81
SFSWAP-204ENST00000535399 OPLAHO14841 1288 aa26.34■■□□□ 1.81
SFSWAP-204ENST00000535399 SNAI1O95863 264 aaPredicted RBP26.34■■□□□ 1.81
SFSWAP-204ENST00000535399 EVCP57679 992 aa26.34■■□□□ 1.81
SFSWAP-204ENST00000535399 TBC1D5Q92609 795 aa26.34■■□□□ 1.81
SFSWAP-204ENST00000535399 RRP36Q96EU6 259 aaKnown RBP26.34■■□□□ 1.81
SFSWAP-204ENST00000535399 MAF1Q9H063 256 aa26.34■■□□□ 1.81
SFSWAP-204ENST00000535399 NAP1L2Q9ULW6 460 aaPredicted RBP26.34■■□□□ 1.81
SFSWAP-204ENST00000535399 PCDHA1Q9Y5I3 950 aa26.34■■□□□ 1.81
SFSWAP-204ENST00000535399 BAZ2BQ9UIF8 2168 aaKnown RBP26.33■■□□□ 1.81
SFSWAP-204ENST00000535399 CDC27P30260 824 aa26.33■■□□□ 1.81
SFSWAP-204ENST00000535399 FUT2Q10981 343 aa26.33■■□□□ 1.81
SFSWAP-204ENST00000535399 LHX8Q68G74 356 aa26.33■■□□□ 1.81
SFSWAP-204ENST00000535399 PDRG1Q9NUG6 133 aa26.33■■□□□ 1.81
SFSWAP-204ENST00000535399 RBBP6Q7Z6E9 1792 aaKnown RBP26.33■■□□□ 1.8
SFSWAP-204ENST00000535399 NID2Q14112 1375 aa26.33■■□□□ 1.8
SFSWAP-204ENST00000535399 CALML3P27482 149 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms