RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.22■□□□□ 0.03
TMEM258-202ENST00000535042 RRP36Q96EU6 259 aaKnown RBP15.22■□□□□ 0.03
TMEM258-202ENST00000535042 MMP19Q99542 508 aa15.22■□□□□ 0.03
TMEM258-202ENST00000535042 NUDT12Q9BQG2 462 aa15.22■□□□□ 0.03
TMEM258-202ENST00000535042 AMNQ9BXJ7 453 aa15.22■□□□□ 0.03
TMEM258-202ENST00000535042 PTCH2Q9Y6C5 1203 aa15.22■□□□□ 0.03
TMEM258-202ENST00000535042 IVNS1ABPQ9Y6Y0 642 aa15.22■□□□□ 0.03
TMEM258-202ENST00000535042 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 CD2BP2O95400 341 aaKnown RBP15.21■□□□□ 0.03
TMEM258-202ENST00000535042 FCER1AP12319 257 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 CYP2B6P20813 491 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 ADORA2AP29274 412 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 PRMT2P55345 433 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 ST3GAL1Q11201 340 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 MAP2K5Q13163 448 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 ABRAQ8N0Z2 381 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 NECAB1Q8N987 351 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 NPLOC4Q8TAT6 608 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 TBC1D5Q92609 795 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 PHKBQ93100 1093 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 MCOLN1Q9GZU1 580 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 SLKQ9H2G2 1235 aaPredicted RBP15.21■□□□□ 0.03
TMEM258-202ENST00000535042 ACAD9Q9H845 621 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 A1CFQ9NQ94 594 aaKnown RBP15.21■□□□□ 0.03
TMEM258-202ENST00000535042 FBXO40Q9UH90 709 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 PNMA2Q9UL42 364 aa15.21■□□□□ 0.03
TMEM258-202ENST00000535042 V9GY48 417 aaPredicted RBP15.21■□□□□ 0.03
TMEM258-202ENST00000535042 OPLAHO14841 1288 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 PGK2P07205 417 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 IFNAR1P17181 557 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 IRF5Q13568 498 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 KCTD2Q14681 263 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 FBXO46Q6PJ61 603 aaPredicted RBP15.2■□□□□ 0.02
TMEM258-202ENST00000535042 SOCS4Q8WXH5 440 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 LIMCH1Q9UPQ0 1083 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 MGAMO43451 1857 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 PLXNB2O15031 1838 aa15.2■□□□□ 0.02
TMEM258-202ENST00000535042 ABCB11O95342 1321 aa15.19■□□□□ 0.02
TMEM258-202ENST00000535042 DNAJC25-GNG10A0A024R161 153 aa15.19■□□□□ 0.02
TMEM258-202ENST00000535042 CTDNEP1O95476 244 aa15.19■□□□□ 0.02
TMEM258-202ENST00000535042 HOXC6P09630 235 aa15.19■□□□□ 0.02
TMEM258-202ENST00000535042 RGS2P41220 211 aa15.19■□□□□ 0.02
TMEM258-202ENST00000535042 PKN2Q16513 984 aaKnown RBP15.19■□□□□ 0.02
TMEM258-202ENST00000535042 CCL14Q16627 93 aa15.19■□□□□ 0.02
TMEM258-202ENST00000535042 NSMFQ6X4W1 530 aa15.19■□□□□ 0.02
TMEM258-202ENST00000535042 ANKRD35Q8N283 1001 aa15.19■□□□□ 0.02
TMEM258-202ENST00000535042 RAET1EQ8TD07 263 aa15.19■□□□□ 0.02
TMEM258-202ENST00000535042 PURBQ96QR8 312 aaKnown RBP15.19■□□□□ 0.02
TMEM258-202ENST00000535042 SEC63Q9UGP8 760 aaKnown RBP15.19■□□□□ 0.02
TMEM258-202ENST00000535042 BAZ2BQ9UIF8 2168 aaKnown RBP15.18■□□□□ 0.02
TMEM258-202ENST00000535042 SMCHD1A6NHR9 2005 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 PRPF3O43395 683 aaKnown RBP15.18■□□□□ 0.02
TMEM258-202ENST00000535042 ADCY3O60266 1144 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 XRCC5P13010 732 aaKnown RBP15.18■□□□□ 0.02
TMEM258-202ENST00000535042 ELNP15502 786 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 CNTN2Q02246 1040 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 BAATQ14032 418 aaPredicted RBP15.18■□□□□ 0.02
TMEM258-202ENST00000535042 PKN1Q16512 942 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 ZNF792Q3KQV3 632 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 TYW1BQ6NUM6 668 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 SLC30A10Q6XR72 485 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 DPP9Q86TI2 863 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 GPKOWQ92917 476 aaPredicted RBP eCLIP15.18■□□□□ 0.02
TMEM258-202ENST00000535042 GTF3C6Q969F1 213 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 DDX11Q96FC9 970 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 FGD4Q96M96 766 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 APBA2Q99767 749 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 SLC26A6Q9BXS9 759 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 CYP39A1Q9NYL5 469 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 FLRT1Q9NZU1 646 aa15.18■□□□□ 0.02
TMEM258-202ENST00000535042 MRPL11Q9Y3B7 192 aaKnown RBP15.18■□□□□ 0.02
TMEM258-202ENST00000535042 DOCK3Q8IZD9 2030 aa15.17■□□□□ 0.02
TMEM258-202ENST00000535042 CPLX1O14810 134 aa15.17■□□□□ 0.02
TMEM258-202ENST00000535042 ST18O60284 1047 aa15.17■□□□□ 0.02
TMEM258-202ENST00000535042 IGHA2P01877 340 aa15.17■□□□□ 0.02
TMEM258-202ENST00000535042 WWC2Q6AWC2 1192 aa15.17■□□□□ 0.02
TMEM258-202ENST00000535042 FAM133AQ8N9E0 248 aa15.17■□□□□ 0.02
TMEM258-202ENST00000535042 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
TMEM258-202ENST00000535042 TRIB2Q92519 343 aa15.17■□□□□ 0.02
TMEM258-202ENST00000535042 RNF26Q9BY78 433 aaPredicted RBP15.17■□□□□ 0.02
TMEM258-202ENST00000535042 ASTN1O14525 1302 aa15.17■□□□□ 0.02
TMEM258-202ENST00000535042 PTPDC1A2A3K4 754 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 SOWAHBA6NEL2 793 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 POTEB2H3BUK9 544 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 GRK4P32298 578 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 RPS6P62753 249 aaKnown RBP15.16■□□□□ 0.02
TMEM258-202ENST00000535042 TRIM32Q13049 653 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 PFKFB3Q16875 520 aaPredicted RBP15.16■□□□□ 0.02
TMEM258-202ENST00000535042 RNF207Q6ZRF8 634 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 HEATR3Q7Z4Q2 680 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 RGS22Q8NE09 1264 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 PXYLP1Q8TE99 480 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 SHISA4Q96DD7 197 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 MAML3Q96JK9 1138 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 ZSCAN31Q96LW9 406 aaPredicted RBP15.16■□□□□ 0.02
TMEM258-202ENST00000535042 COL20A1Q9P218 1284 aa15.16■□□□□ 0.02
TMEM258-202ENST00000535042 ZNF236Q9UL36 1845 aa15.15■□□□□ 0.02
TMEM258-202ENST00000535042 STXBP3O00186 592 aa15.15■□□□□ 0.02
TMEM258-202ENST00000535042 SCG2P13521 617 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms