RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CYP39A1Q9NYL5 469 aa24.92■■□□□ 1.58
PKP3-211ENST00000534401 MSCO60682 206 aa24.91■■□□□ 1.58
PKP3-211ENST00000534401 REC8O95072 547 aa24.91■■□□□ 1.58
PKP3-211ENST00000534401 SNAI1O95863 264 aaPredicted RBP24.91■■□□□ 1.58
PKP3-211ENST00000534401 KRT32Q14532 448 aa24.91■■□□□ 1.58
PKP3-211ENST00000534401 ADCK5Q3MIX3 580 aa24.91■■□□□ 1.58
PKP3-211ENST00000534401 SGMS1Q86VZ5 419 aa24.91■■□□□ 1.58
PKP3-211ENST00000534401 RGS22Q8NE09 1264 aa24.91■■□□□ 1.58
PKP3-211ENST00000534401 NEK1Q96PY6 1258 aa24.91■■□□□ 1.58
PKP3-211ENST00000534401 DDX20Q9UHI6 824 aaKnown RBP24.91■■□□□ 1.58
PKP3-211ENST00000534401 SEPT4O43236 478 aa24.9■■□□□ 1.58
PKP3-211ENST00000534401 TAL1P17542 331 aaPredicted RBP24.9■■□□□ 1.58
PKP3-211ENST00000534401 CNTN2Q02246 1040 aa24.9■■□□□ 1.58
PKP3-211ENST00000534401 CDC37Q16543 378 aaPredicted RBP24.9■■□□□ 1.58
PKP3-211ENST00000534401 SOWAHBA6NEL2 793 aa24.89■■□□□ 1.58
PKP3-211ENST00000534401 POTEB2H3BUK9 544 aa24.89■■□□□ 1.58
PKP3-211ENST00000534401 DDAH1O94760 285 aa24.89■■□□□ 1.58
PKP3-211ENST00000534401 FARP2O94887 1054 aaPredicted RBP24.89■■□□□ 1.58
PKP3-211ENST00000534401 ZNF865P0CJ78 1059 aaPredicted RBP24.89■■□□□ 1.58
PKP3-211ENST00000534401 PRAMEF19Q5SWL8 479 aa24.89■■□□□ 1.58
PKP3-211ENST00000534401 DHX32Q7L7V1 743 aaKnown RBP24.89■■□□□ 1.58
PKP3-211ENST00000534401 CATIPQ7Z7H3 387 aa24.89■■□□□ 1.58
PKP3-211ENST00000534401 ZNF654Q8IZM8 581 aa24.89■■□□□ 1.58
PKP3-211ENST00000534401 ASTN1O14525 1302 aa24.88■■□□□ 1.57
PKP3-211ENST00000534401 NFIBO00712 420 aa24.88■■□□□ 1.57
PKP3-211ENST00000534401 SMARCA1P28370 1054 aa24.88■■□□□ 1.57
PKP3-211ENST00000534401 QRICH1Q2TAL8 776 aa24.88■■□□□ 1.57
PKP3-211ENST00000534401 MORC4Q8TE76 937 aa24.88■■□□□ 1.57
PKP3-211ENST00000534401 KATNBL1Q9H079 304 aa24.88■■□□□ 1.57
PKP3-211ENST00000534401 SNX14Q9Y5W7 946 aa24.88■■□□□ 1.57
PKP3-211ENST00000534401 LOC102724159A0A0B4J2E5 919 aa24.87■■□□□ 1.57
PKP3-211ENST00000534401 CYTH3O43739 400 aa24.87■■□□□ 1.57
PKP3-211ENST00000534401 PWP2Q15269 919 aaKnown RBP24.87■■□□□ 1.57
PKP3-211ENST00000534401 USP26Q9BXU7 913 aa24.87■■□□□ 1.57
PKP3-211ENST00000534401 HMGB1P09429 215 aaKnown RBP24.86■■□□□ 1.57
PKP3-211ENST00000534401 GHRHRQ02643 423 aa24.86■■□□□ 1.57
PKP3-211ENST00000534401 ABCB11O95342 1321 aa24.86■■□□□ 1.57
PKP3-211ENST00000534401 ZBTB5O15062 677 aa24.85■■□□□ 1.57
PKP3-211ENST00000534401 COL6A1P12109 1028 aa24.85■■□□□ 1.57
PKP3-211ENST00000534401 BAATQ14032 418 aaPredicted RBP24.85■■□□□ 1.57
PKP3-211ENST00000534401 NSMFQ6X4W1 530 aa24.85■■□□□ 1.57
PKP3-211ENST00000534401 FBXO11Q86XK2 927 aa24.85■■□□□ 1.57
PKP3-211ENST00000534401 FBXL16Q8N461 479 aa24.85■■□□□ 1.57
PKP3-211ENST00000534401 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.85■■□□□ 1.57
PKP3-211ENST00000534401 PPP1R11O60927 126 aaPredicted RBP24.84■■□□□ 1.57
PKP3-211ENST00000534401 CNGA1P29973 690 aa24.84■■□□□ 1.57
PKP3-211ENST00000534401 ARMCX2Q7L311 632 aa24.84■■□□□ 1.57
PKP3-211ENST00000534401 DIS3LQ8TF46 1054 aaKnown RBP24.84■■□□□ 1.57
PKP3-211ENST00000534401 PAWRQ96IZ0 340 aaKnown RBP24.84■■□□□ 1.57
PKP3-211ENST00000534401 SPZ1Q9BXG8 430 aa24.84■■□□□ 1.57
PKP3-211ENST00000534401 LRRC2Q9BYS8 371 aa24.84■■□□□ 1.57
PKP3-211ENST00000534401 ABHD16BQ9H3Z7 469 aa24.84■■□□□ 1.57
PKP3-211ENST00000534401 VAT1LQ9HCJ6 419 aa24.84■■□□□ 1.57
PKP3-211ENST00000534401 ASB14A6NK59 587 aa24.83■■□□□ 1.57
PKP3-211ENST00000534401 CALM1P0DP23 149 aa24.83■■□□□ 1.57
PKP3-211ENST00000534401 CALM2P0DP24 149 aa24.83■■□□□ 1.57
PKP3-211ENST00000534401 CALM3P0DP25 149 aa24.83■■□□□ 1.57
PKP3-211ENST00000534401 CCDC144CPQ8IYA2 1237 aa24.83■■□□□ 1.57
PKP3-211ENST00000534401 AMNQ9BXJ7 453 aa24.83■■□□□ 1.57
PKP3-211ENST00000534401 CNPY2Q9Y2B0 182 aa24.83■■□□□ 1.57
PKP3-211ENST00000534401 CEP290O15078 2479 aa24.83■■□□□ 1.56
PKP3-211ENST00000534401 ALPK3Q96L96 1907 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 CCDC69A6NI79 296 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 LRRC37A2A6NM11 1700 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 OPLAHO14841 1288 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 KIF5BP33176 963 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 RPS6P62753 249 aaKnown RBP24.82■■□□□ 1.56
PKP3-211ENST00000534401 ACVR2BQ13705 512 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 USH1GQ495M9 461 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 RNF207Q6ZRF8 634 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 NECAB2Q7Z6G3 386 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 LZTS2Q9BRK4 669 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 MYL10Q9BUA6 226 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 AGXT2Q9BYV1 514 aa24.82■■□□□ 1.56
PKP3-211ENST00000534401 MRPL11Q9Y3B7 192 aaKnown RBP24.82■■□□□ 1.56
PKP3-211ENST00000534401 PNMA6FA0A0J9YX94 578 aa24.81■■□□□ 1.56
PKP3-211ENST00000534401 AKR1A1P14550 325 aa24.81■■□□□ 1.56
PKP3-211ENST00000534401 GNAQP50148 359 aa24.81■■□□□ 1.56
PKP3-211ENST00000534401 APOA5Q6Q788 366 aa24.81■■□□□ 1.56
PKP3-211ENST00000534401 SLC30A10Q6XR72 485 aa24.81■■□□□ 1.56
PKP3-211ENST00000534401 CTCFLQ8NI51 663 aaPredicted RBP24.81■■□□□ 1.56
PKP3-211ENST00000534401 NUP133Q8WUM0 1156 aa24.81■■□□□ 1.56
PKP3-211ENST00000534401 TBC1D5Q92609 795 aa24.81■■□□□ 1.56
PKP3-211ENST00000534401 PURBQ96QR8 312 aaKnown RBP24.81■■□□□ 1.56
PKP3-211ENST00000534401 PIGSQ96S52 555 aa24.81■■□□□ 1.56
PKP3-211ENST00000534401 ADD3Q9UEY8 706 aaKnown RBP24.81■■□□□ 1.56
PKP3-211ENST00000534401 DHX16O60231 1041 aaKnown RBP24.8■■□□□ 1.56
PKP3-211ENST00000534401 EDNRBP24530 442 aa24.8■■□□□ 1.56
PKP3-211ENST00000534401 RCAN1P53805 252 aa24.8■■□□□ 1.56
PKP3-211ENST00000534401 NFXL1Q6ZNB6 911 aa24.8■■□□□ 1.56
PKP3-211ENST00000534401 SAMD3Q8N6K7 520 aa24.8■■□□□ 1.56
PKP3-211ENST00000534401 FANCBQ8NB91 859 aa24.8■■□□□ 1.56
PKP3-211ENST00000534401 DNERQ8NFT8 737 aa24.8■■□□□ 1.56
PKP3-211ENST00000534401 FAM184BQ9ULE4 1060 aa24.8■■□□□ 1.56
PKP3-211ENST00000534401 SLC12A7Q9Y666 1083 aa24.8■■□□□ 1.56
PKP3-211ENST00000534401 PTPDC1A2A3K4 754 aa24.79■■□□□ 1.56
PKP3-211ENST00000534401 ALDH5A1P51649 535 aaPredicted RBP24.79■■□□□ 1.56
PKP3-211ENST00000534401 NKX3-2P78367 333 aa24.79■■□□□ 1.56
PKP3-211ENST00000534401 TRAF1Q13077 416 aa24.79■■□□□ 1.56
PKP3-211ENST00000534401 MCF2L2Q86YR7 1114 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms