RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 VAV2P52735 878 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 BIRC2Q13490 618 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 FAM173BQ6P4H8 233 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 MMS19Q96T76 1030 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 NUP58Q9BVL2 599 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 ELP3Q9H9T3 547 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 SUGT1Q9Y2Z0 365 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 CAMTA2O94983 1202 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 ARL1P40616 181 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-221ENST00000532331 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
PTPRK-221ENST00000532331 FAM178BQ8IXR5 827 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 FTOQ9C0B1 505 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTPRK-221ENST00000532331 PARP2Q9UGN5 583 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 MED14O60244 1454 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 PFKFB2O60825 505 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 NLRP12P59046 1061 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 CYP4A11Q02928 519 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 CALCOCO2Q13137 446 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 TAF1CQ15572 869 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-221ENST00000532331 KIAA1841Q6NSI8 718 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 ELMSAN1Q6PJG2 1045 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 GIMAP7Q8NHV1 300 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 GOLGA5Q8TBA6 731 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 JAKMIP2Q96AA8 810 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 AGTPBP1Q9UPW5 1226 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 TNPO2O14787 897 aaKnown RBP12.48□□□□□ -0.41
PTPRK-221ENST00000532331 ITPK1Q13572 414 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 ASIC2Q16515 512 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 ODR4Q5SWX8 454 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 FAM83BQ5T0W9 1011 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 CYP26C1Q6V0L0 522 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 KIAA1524Q8TCG1 905 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 NLRP7Q8WX94 980 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 TTC14Q96N46 770 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 TXNDC16Q9P2K2 825 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 MADDQ8WXG6 1647 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 OSBP2Q969R2 916 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 NAP1L3Q99457 506 aaPredicted RBP12.48□□□□□ -0.41
PTPRK-221ENST00000532331 HAUS2Q9NVX0 235 aa12.48□□□□□ -0.41
PTPRK-221ENST00000532331 SNAP23O00161 211 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 BCRP11274 1271 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 CCDC114Q96M63 670 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 CEP63Q96MT8 703 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 ANKFY1Q9P2R3 1169 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 INO80B-WBP1J3KQ70 363 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 TMEM191BP0C7N4 346 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 GNAT1P11488 350 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
PTPRK-221ENST00000532331 CYP2J2P51589 502 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 FANCCQ00597 558 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 POSTNQ15063 836 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 CCDC14Q49A88 953 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 CCDC63Q8NA47 563 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 NSMCE1Q8WV22 266 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 IFT81Q8WYA0 676 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 INO80BQ9C086 356 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-221ENST00000532331 PCDHA4Q9UN74 947 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 FER1L4A9Z1Z3 1794 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 SPOPO43791 374 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 EPHA10Q5JZY3 1008 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 SNRNP48Q6IEG0 339 aaKnown RBP12.47□□□□□ -0.41
PTPRK-221ENST00000532331 CSRNP2Q9H175 543 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 TLR3O15455 904 aaKnown RBP12.47□□□□□ -0.41
PTPRK-221ENST00000532331 CSPG5O95196 566 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 PSAPP07602 524 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 GSPT1P15170 499 aaKnown RBP12.47□□□□□ -0.41
PTPRK-221ENST00000532331 COPB2P35606 906 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
PTPRK-221ENST00000532331 ME3Q16798 604 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 CPS1P31327 1500 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 CCDC26Q8TAB7 109 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 RNF26Q9BY78 433 aaPredicted RBP12.47□□□□□ -0.41
PTPRK-221ENST00000532331 ZFYVE28Q9HCC9 887 aa12.47□□□□□ -0.41
PTPRK-221ENST00000532331 GCFC2P16383 781 aaKnown RBP12.46□□□□□ -0.41
PTPRK-221ENST00000532331 HUNKP57058 714 aa12.46□□□□□ -0.41
PTPRK-221ENST00000532331 MMP19Q99542 508 aa12.46□□□□□ -0.41
PTPRK-221ENST00000532331 FAM196BA6NMK8 535 aa12.46□□□□□ -0.41
PTPRK-221ENST00000532331 GMPSP49915 693 aaPredicted RBP12.46□□□□□ -0.41
PTPRK-221ENST00000532331 PTPRUQ92729 1446 aa12.46□□□□□ -0.41
PTPRK-221ENST00000532331 NACC1Q96RE7 527 aa12.46□□□□□ -0.41
PTPRK-221ENST00000532331 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.46□□□□□ -0.41
PTPRK-221ENST00000532331 HERC5Q9UII4 1024 aaKnown RBP12.46□□□□□ -0.41
PTPRK-221ENST00000532331 FAM169AQ9Y6X4 670 aa12.46□□□□□ -0.41
PTPRK-221ENST00000532331 USP42Q9H9J4 1324 aaKnown RBP12.46□□□□□ -0.41
PTPRK-221ENST00000532331 CELF2O95319 508 aaKnown RBP12.46□□□□□ -0.42
PTPRK-221ENST00000532331 FCER1AP12319 257 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 TERF1P54274 439 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 SCARF1Q14162 830 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 SEPT2Q15019 361 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 RSBN1LQ6PCB5 846 aaPredicted RBP12.46□□□□□ -0.42
PTPRK-221ENST00000532331 SLC17A8Q8NDX2 589 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms