RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ZNF214Q9UL59 606 aaPredicted RBP21.89■■□□□ 1.09
SMPD1-205ENST00000531303 ABCB11O95342 1321 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 BTBD18B2RXH4 712 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 CALML3P27482 149 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 KRT2P35908 639 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 STAT3P40763 770 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 TRAF1Q13077 416 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 PPP1R18Q6NYC8 613 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 PSTPIP2Q9H939 334 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 RBPJLQ9UBG7 517 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 PCDHA4Q9UN74 947 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 MRPL11Q9Y3B7 192 aaKnown RBP21.88■■□□□ 1.09
SMPD1-205ENST00000531303 RIPK3Q9Y572 518 aa21.88■■□□□ 1.09
SMPD1-205ENST00000531303 A0A0G2JMZ2 1700 aa21.87■■□□□ 1.09
SMPD1-205ENST00000531303 CNMDO75829 334 aa21.87■■□□□ 1.09
SMPD1-205ENST00000531303 OAZ1P54368 228 aa21.87■■□□□ 1.09
SMPD1-205ENST00000531303 TAF1CQ15572 869 aaPredicted RBP21.87■■□□□ 1.09
SMPD1-205ENST00000531303 FOXD4L6Q3SYB3 417 aaPredicted RBP21.87■■□□□ 1.09
SMPD1-205ENST00000531303 FOXD4L3Q6VB84 417 aaPredicted RBP21.87■■□□□ 1.09
SMPD1-205ENST00000531303 BLIDQ8IZY5 108 aa21.87■■□□□ 1.09
SMPD1-205ENST00000531303 TRERF1Q96PN7 1200 aa21.87■■□□□ 1.09
SMPD1-205ENST00000531303 TEX13BQ9BXU2 312 aa21.87■■□□□ 1.09
SMPD1-205ENST00000531303 ZMYND12Q9H0C1 365 aa21.87■■□□□ 1.09
SMPD1-205ENST00000531303 BRMS1Q9HCU9 246 aa21.87■■□□□ 1.09
SMPD1-205ENST00000531303 KIF28PB7ZC32 967 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 F13A1P00488 732 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 PDIA4P13667 645 aaKnown RBP21.86■■□□□ 1.09
SMPD1-205ENST00000531303 GNA11P29992 359 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 TM4SF4P48230 202 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 VEGFBP49765 207 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 NR5A1Q13285 461 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 NPY5RQ15761 445 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 UBE2SQ16763 222 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 MUM1L1Q5H9M0 696 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 ANKRD13CQ8N6S4 541 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 RASGRP4Q8TDF6 673 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 CUL5Q93034 780 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 SPATC1LQ9H0A9 340 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 RNF146Q9NTX7 359 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 RABGAP1Q9Y3P9 1069 aa21.86■■□□□ 1.09
SMPD1-205ENST00000531303 ESYT2A0FGR8 921 aa21.85■■□□□ 1.09
SMPD1-205ENST00000531303 MRPL12P52815 198 aaKnown RBP21.85■■□□□ 1.09
SMPD1-205ENST00000531303 Q3C1V9 767 aa21.85■■□□□ 1.09
SMPD1-205ENST00000531303 TBC1D5Q92609 795 aa21.85■■□□□ 1.09
SMPD1-205ENST00000531303 RIC8AQ9NPQ8 531 aa21.85■■□□□ 1.09
SMPD1-205ENST00000531303 BIN2Q9UBW5 565 aaPredicted RBP21.85■■□□□ 1.09
SMPD1-205ENST00000531303 PNMA2Q9UL42 364 aa21.85■■□□□ 1.09
SMPD1-205ENST00000531303 NFIBO00712 420 aa21.84■■□□□ 1.09
SMPD1-205ENST00000531303 OPLAHO14841 1288 aa21.84■■□□□ 1.09
SMPD1-205ENST00000531303 ATP2A1O14983 1001 aa21.84■■□□□ 1.09
SMPD1-205ENST00000531303 CFBP00751 764 aa21.84■■□□□ 1.09
SMPD1-205ENST00000531303 RESTQ13127 1097 aa21.84■■□□□ 1.09
SMPD1-205ENST00000531303 JAKMIP3Q5VZ66 844 aa21.84■■□□□ 1.09
SMPD1-205ENST00000531303 USP17L6PQ6QN14 398 aa21.84■■□□□ 1.09
SMPD1-205ENST00000531303 GTF3C2Q8WUA4 911 aaPredicted RBP21.84■■□□□ 1.09
SMPD1-205ENST00000531303 CLEC4DQ8WXI8 215 aa21.84■■□□□ 1.09
SMPD1-205ENST00000531303 TMEM260Q9NX78 707 aa21.84■■□□□ 1.09
SMPD1-205ENST00000531303 GCLCP48506 637 aaPredicted RBP21.83■■□□□ 1.09
SMPD1-205ENST00000531303 C1QTNF8P60827 252 aa21.83■■□□□ 1.09
SMPD1-205ENST00000531303 NOM1Q5C9Z4 860 aaKnown RBP21.83■■□□□ 1.09
SMPD1-205ENST00000531303 GALNT17Q6IS24 598 aa21.83■■□□□ 1.09
SMPD1-205ENST00000531303 FAM173BQ6P4H8 233 aa21.83■■□□□ 1.09
SMPD1-205ENST00000531303 NCAPG2Q86XI2 1143 aa21.83■■□□□ 1.09
SMPD1-205ENST00000531303 FAM177A1Q8N128 213 aaPredicted RBP21.83■■□□□ 1.09
SMPD1-205ENST00000531303 RGS22Q8NE09 1264 aa21.83■■□□□ 1.09
SMPD1-205ENST00000531303 BICD2Q8TD16 824 aa21.83■■□□□ 1.09
SMPD1-205ENST00000531303 MOV10L1Q9BXT6 1211 aaKnown RBP21.83■■□□□ 1.09
SMPD1-205ENST00000531303 ZCCHC17Q9NP64 241 aaKnown RBP21.83■■□□□ 1.09
SMPD1-205ENST00000531303 CPA4Q9UI42 421 aa21.83■■□□□ 1.09
SMPD1-205ENST00000531303 HOXA13P31271 388 aaPredicted RBP21.83■■□□□ 1.08
SMPD1-205ENST00000531303 ERVK-9P63128 1117 aa21.83■■□□□ 1.08
SMPD1-205ENST00000531303 ERVK-24P63145 666 aa21.83■■□□□ 1.08
SMPD1-205ENST00000531303 RIOX2Q8IUF8 465 aa21.83■■□□□ 1.08
SMPD1-205ENST00000531303 REXO1Q8N1G1 1221 aaKnown RBP21.83■■□□□ 1.08
SMPD1-205ENST00000531303 DAGLBQ8NCG7 672 aa21.83■■□□□ 1.08
SMPD1-205ENST00000531303 GPRC5AQ8NFJ5 357 aa21.83■■□□□ 1.08
SMPD1-205ENST00000531303 PGBD1Q96JS3 809 aa21.83■■□□□ 1.08
SMPD1-205ENST00000531303 FOXP1Q9H334 677 aaPredicted RBP21.83■■□□□ 1.08
SMPD1-205ENST00000531303 PCDHA6Q9UN73 950 aa21.83■■□□□ 1.08
SMPD1-205ENST00000531303 PCDHA8Q9Y5H6 950 aa21.83■■□□□ 1.08
SMPD1-205ENST00000531303 FAM205CA6NFA0 338 aa21.82■■□□□ 1.08
SMPD1-205ENST00000531303 TKFCQ3LXA3 575 aa21.82■■□□□ 1.08
SMPD1-205ENST00000531303 WDR78Q5VTH9 848 aa21.82■■□□□ 1.08
SMPD1-205ENST00000531303 NSMFQ6X4W1 530 aa21.82■■□□□ 1.08
SMPD1-205ENST00000531303 CHAMP1Q96JM3 812 aa21.82■■□□□ 1.08
SMPD1-205ENST00000531303 R3HDMLQ9H3Y0 253 aa21.82■■□□□ 1.08
SMPD1-205ENST00000531303 ZFYVE28Q9HCC9 887 aa21.82■■□□□ 1.08
SMPD1-205ENST00000531303 GCOM1H8Y6P7 765 aaPredicted RBP21.81■■□□□ 1.08
SMPD1-205ENST00000531303 ECM2O94769 699 aaPredicted RBP21.81■■□□□ 1.08
SMPD1-205ENST00000531303 POLR2MP0CAP2 368 aa21.81■■□□□ 1.08
SMPD1-205ENST00000531303 HSPA6P17066 643 aa21.81■■□□□ 1.08
SMPD1-205ENST00000531303 U2AF2P26368 475 aaKnown RBP eCLIP21.81■■□□□ 1.08
SMPD1-205ENST00000531303 CRHR2Q13324 411 aa21.81■■□□□ 1.08
SMPD1-205ENST00000531303 EARS2Q5JPH6 523 aaKnown RBP21.81■■□□□ 1.08
SMPD1-205ENST00000531303 PIK3AP1Q6ZUJ8 805 aa21.81■■□□□ 1.08
SMPD1-205ENST00000531303 FCHSD1Q86WN1 690 aa21.81■■□□□ 1.08
SMPD1-205ENST00000531303 MCF2L2Q86YR7 1114 aa21.81■■□□□ 1.08
SMPD1-205ENST00000531303 NOSTRINQ8IVI9 506 aa21.81■■□□□ 1.08
SMPD1-205ENST00000531303 GLT8D2Q9H1C3 349 aa21.81■■□□□ 1.08
SMPD1-205ENST00000531303 ZSCAN16Q9H4T2 348 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms