RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 GOLGA8HP0CJ92 632 aa12.82□□□□□ -0.36
CAPN1-221ENST00000531068 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
CAPN1-221ENST00000531068 ATN1P54259 1190 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-221ENST00000531068 BAATQ14032 418 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-221ENST00000531068 RGS22Q8NE09 1264 aa12.82□□□□□ -0.36
CAPN1-221ENST00000531068 FGD4Q96M96 766 aa12.82□□□□□ -0.36
CAPN1-221ENST00000531068 MPHOSPH6Q99547 160 aaKnown RBP12.82□□□□□ -0.36
CAPN1-221ENST00000531068 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
CAPN1-221ENST00000531068 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
CAPN1-221ENST00000531068 ZMYND8Q9ULU4 1186 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-221ENST00000531068 PHF24Q9UPV7 400 aa12.82□□□□□ -0.36
CAPN1-221ENST00000531068 PLXNB2O15031 1838 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 SOWAHBA6NEL2 793 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 E7EWF7 191 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 DHX16O60231 1041 aaKnown RBP12.81□□□□□ -0.36
CAPN1-221ENST00000531068 BMP8BP34820 402 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 SEC23AQ15436 765 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 CCDC144BQ3MJ40 725 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 C1orf53Q5VUE5 145 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 IQSEC1Q6DN90 963 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 CASC1Q6TDU7 716 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 ADGRF4Q8IZF3 695 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 PCSK9Q8NBP7 692 aaKnown RBP12.81□□□□□ -0.36
CAPN1-221ENST00000531068 NUP133Q8WUM0 1156 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 PRO3102Q9H379 93 aa12.81□□□□□ -0.36
CAPN1-221ENST00000531068 RLFQ13129 1914 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 A0A0G2JMZ2 1700 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 PTPDC1A2A3K4 754 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 MOXD2PA6NHM9 499 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 SYN1P17600 705 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 RTP1P59025 263 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 TNFAIP2Q03169 654 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 TRAF1Q13077 416 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 RNF207Q6ZRF8 634 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 NOL8Q76FK4 1167 aaKnown RBP12.8□□□□□ -0.36
CAPN1-221ENST00000531068 CYB5R4Q7L1T6 521 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 MCF2L2Q86YR7 1114 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 TMTC2Q8N394 836 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 CLEC4DQ8WXI8 215 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 FERMT2Q96AC1 680 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 GDF15Q99988 308 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 LBHD1Q9BQE6 289 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-221ENST00000531068 ESYT1Q9BSJ8 1104 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 MTA3Q9BTC8 594 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 ATP11BQ9Y2G3 1177 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 RBM8AQ9Y5S9 174 aaKnown RBP12.8□□□□□ -0.36
CAPN1-221ENST00000531068 ZNF236Q9UL36 1845 aa12.8□□□□□ -0.36
CAPN1-221ENST00000531068 KLRF2D3W0D1 207 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 NFIBO00712 420 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 ADAMTS4O75173 837 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 C6orf222P0C671 652 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-221ENST00000531068 CST5P28325 142 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-221ENST00000531068 ACLYP53396 1101 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 GJA9P57773 515 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 WTAPQ15007 396 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 KCNA10Q16322 511 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 CDC37Q16543 378 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-221ENST00000531068 GNASQ5JWF2 1037 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 CATIPQ7Z7H3 387 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 DNERQ8NFT8 737 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 MORC4Q8TE76 937 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 TBC1D32Q96NH3 1257 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 KATNBL1Q9H079 304 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 AP5M1Q9H0R1 490 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 VTA1Q9NP79 307 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 MRPL11Q9Y3B7 192 aaKnown RBP12.79□□□□□ -0.36
CAPN1-221ENST00000531068 ABCB11O95342 1321 aa12.79□□□□□ -0.36
CAPN1-221ENST00000531068 ZEB2O60315 1214 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 CALML3P27482 149 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 MAGEA10P43363 369 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-221ENST00000531068 FXR1P51114 621 aaKnown RBP eCLIP12.78□□□□□ -0.36
CAPN1-221ENST00000531068 RPS6P62753 249 aaKnown RBP12.78□□□□□ -0.36
CAPN1-221ENST00000531068 NKX3-2P78367 333 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 SNX17Q15036 470 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 USH1GQ495M9 461 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 TMEM67Q5HYA8 995 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 CCSAPQ6IQ19 270 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-221ENST00000531068 FBXO11Q86XK2 927 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 VTI1AQ96AJ9 217 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 GLT1D1Q96MS3 346 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 AMNQ9BXJ7 453 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 UBE2OQ9C0C9 1292 aaKnown RBP12.78□□□□□ -0.36
CAPN1-221ENST00000531068 LSG1Q9H089 658 aaKnown RBP12.78□□□□□ -0.36
CAPN1-221ENST00000531068 UPF3AQ9H1J1 476 aaKnown RBP12.78□□□□□ -0.36
CAPN1-221ENST00000531068 JMJD4Q9H9V9 463 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 ANO2Q9NQ90 1003 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 Q9Y3F1 56 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
CAPN1-221ENST00000531068 A0A1W2PQ45 241 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-221ENST00000531068 A0A1W2PQY0 241 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-221ENST00000531068 MCM5P33992 734 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.37
CAPN1-221ENST00000531068 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-221ENST00000531068 PDE4DQ08499 809 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 TRIM60Q495X7 471 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 RNF20Q5VTR2 975 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms