RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 CCDC86Q9H6F5 360 aaKnown RBP9.28□□□□□ -0.92
SVIP-204ENST00000530199 EHMT1Q9H9B1 1298 aa9.28□□□□□ -0.92
SVIP-204ENST00000530199 POLR3KQ9Y2Y1 108 aaPredicted RBP9.28□□□□□ -0.92
SVIP-204ENST00000530199 SMAD7O15105 426 aaKnown RBP9.27□□□□□ -0.93
SVIP-204ENST00000530199 SLURP2P0DP57 97 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 IMPDH2P12268 514 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 SELPP16109 830 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 CDK8P49336 464 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 SETDB1Q15047 1291 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 NFE2L2Q16236 605 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 CCDC93Q567U6 631 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 FAM169BQ8N8A8 192 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 KLHL23Q8NBE8 558 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 HNRNPLLQ8WVV9 542 aaKnown RBP9.27□□□□□ -0.93
SVIP-204ENST00000530199 CRBNQ96SW2 442 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 TRIM55Q9BYV6 548 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 SIRPGQ9P1W8 387 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 PCDHA4Q9UN74 947 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 TMA7Q9Y2S6 64 aaKnown RBP9.27□□□□□ -0.93
SVIP-204ENST00000530199 PCDHB14Q9Y5E9 798 aa9.27□□□□□ -0.93
SVIP-204ENST00000530199 SOS1Q07889 1333 aaPredicted RBP9.27□□□□□ -0.93
SVIP-204ENST00000530199 HTTP42858 3142 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 TLDC2A0PJX2 215 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 SHISA8B8ZZ34 492 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 K7ELQ4 463 aaPredicted RBP9.26□□□□□ -0.93
SVIP-204ENST00000530199 GFRA2O00451 464 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 ATE1O95260 518 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 SRGNP10124 158 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 BCRP11274 1271 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 EPS15P42566 896 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 KIF23Q02241 960 aaPredicted RBP9.26□□□□□ -0.93
SVIP-204ENST00000530199 SUZ12Q15022 739 aaKnown RBP9.26□□□□□ -0.93
SVIP-204ENST00000530199 TNNI3KQ59H18 835 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 OR6P1Q8NGX9 317 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 MKL1Q969V6 931 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 ZNF277Q9NRM2 450 aaPredicted RBP9.26□□□□□ -0.93
SVIP-204ENST00000530199 TERF2IPQ9NYB0 399 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 PGAP2Q9UHJ9 254 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 BCORQ6W2J9 1755 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 SCN11AQ9UI33 1791 aa9.26□□□□□ -0.93
SVIP-204ENST00000530199 TJP1Q07157 1748 aa9.25□□□□□ -0.93
SVIP-204ENST00000530199 AKAP11Q9UKA4 1901 aa9.25□□□□□ -0.93
SVIP-204ENST00000530199 CTSBP07858 339 aa9.25□□□□□ -0.93
SVIP-204ENST00000530199 NID1P14543 1247 aa9.25□□□□□ -0.93
SVIP-204ENST00000530199 COL9A3Q14050 684 aaPredicted RBP9.25□□□□□ -0.93
SVIP-204ENST00000530199 RRS1Q15050 365 aaKnown RBP9.25□□□□□ -0.93
SVIP-204ENST00000530199 HSP90AB2PQ58FF8 381 aa9.25□□□□□ -0.93
SVIP-204ENST00000530199 INTS3Q68E01 1043 aaKnown RBP9.25□□□□□ -0.93
SVIP-204ENST00000530199 ZNF746Q6NUN9 644 aaPredicted RBP9.25□□□□□ -0.93
SVIP-204ENST00000530199 MAP4K3Q8IVH8 894 aa9.25□□□□□ -0.93
SVIP-204ENST00000530199 RBBP8NLQ8NC74 664 aaPredicted RBP9.25□□□□□ -0.93
SVIP-204ENST00000530199 GALNT11Q8NCW6 608 aa9.25□□□□□ -0.93
SVIP-204ENST00000530199 R3HCC1Q9Y3T6 440 aaKnown RBP9.25□□□□□ -0.93
SVIP-204ENST00000530199 SNCAIPQ9Y6H5 919 aa9.25□□□□□ -0.93
SVIP-204ENST00000530199 RBBP6Q7Z6E9 1792 aaKnown RBP9.24□□□□□ -0.93
SVIP-204ENST00000530199 U2SURPO15042 1029 aaKnown RBP9.24□□□□□ -0.93
SVIP-204ENST00000530199 ZNF862O60290 1169 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 AMPD1P23109 780 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 IARSP41252 1262 aaKnown RBP9.24□□□□□ -0.93
SVIP-204ENST00000530199 HUNKP57058 714 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 NLRP12P59046 1061 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 INPP5AQ14642 412 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 WIPI1Q5MNZ9 446 aaPredicted RBP9.24□□□□□ -0.93
SVIP-204ENST00000530199 PRR5LQ6MZQ0 368 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 RGMBQ6NW40 437 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 DMRTC2Q8IXT2 367 aaPredicted RBP9.24□□□□□ -0.93
SVIP-204ENST00000530199 RTKN2Q8IZC4 609 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 MASTLQ96GX5 879 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 SLC12A5Q9H2X9 1139 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 HDAC9Q9UKV0 1011 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 CENPFP49454 3210 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 VCANP13611 3396 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 FLT4P35916 1363 aa9.24□□□□□ -0.93
SVIP-204ENST00000530199 PDE3AQ14432 1141 aa9.23□□□□□ -0.93
SVIP-204ENST00000530199 LRFN4Q6PJG9 635 aa9.23□□□□□ -0.93
SVIP-204ENST00000530199 HDXQ7Z353 690 aa9.23□□□□□ -0.93
SVIP-204ENST00000530199 LSRQ86X29 649 aaPredicted RBP9.23□□□□□ -0.93
SVIP-204ENST00000530199 WDR89Q96FK6 387 aaPredicted RBP9.23□□□□□ -0.93
SVIP-204ENST00000530199 PLPPR2Q96GM1 343 aa9.23□□□□□ -0.93
SVIP-204ENST00000530199 MRFAP1L1Q96HT8 127 aa9.23□□□□□ -0.93
SVIP-204ENST00000530199 USP26Q9BXU7 913 aa9.23□□□□□ -0.93
SVIP-204ENST00000530199 GLIS2Q9BZE0 524 aaPredicted RBP9.23□□□□□ -0.93
SVIP-204ENST00000530199 ADARB2Q9NS39 739 aaKnown RBP9.23□□□□□ -0.93
SVIP-204ENST00000530199 COL15A1P39059 1388 aa9.23□□□□□ -0.93
SVIP-204ENST00000530199 CACNA1SQ13698 1873 aa9.22□□□□□ -0.93
SVIP-204ENST00000530199 LOC100289279A0A1B0GTE1 492 aa9.22□□□□□ -0.93
SVIP-204ENST00000530199 HSP90AB1P08238 724 aaKnown RBP9.22□□□□□ -0.93
SVIP-204ENST00000530199 LIG1P18858 919 aa9.22□□□□□ -0.93
SVIP-204ENST00000530199 HNRNPUQ00839 825 aaKnown RBP eCLIP9.22□□□□□ -0.93
SVIP-204ENST00000530199 KIF4BQ2VIQ3 1234 aa9.22□□□□□ -0.93
SVIP-204ENST00000530199 CDC37L1Q7L3B6 337 aa9.22□□□□□ -0.93
SVIP-204ENST00000530199 SYNE4Q8N205 404 aa9.22□□□□□ -0.93
SVIP-204ENST00000530199 JDP2Q8WYK2 163 aa9.22□□□□□ -0.93
SVIP-204ENST00000530199 LAMA3Q16787 3333 aa9.22□□□□□ -0.93
SVIP-204ENST00000530199 CEP290O15078 2479 aa9.21□□□□□ -0.93
SVIP-204ENST00000530199 DDX3YO15523 660 aaKnown RBP9.21□□□□□ -0.94
SVIP-204ENST00000530199 ADAM11O75078 769 aa9.21□□□□□ -0.94
SVIP-204ENST00000530199 DEAF1O75398 565 aaPredicted RBP9.21□□□□□ -0.94
SVIP-204ENST00000530199 CELA2BP08218 269 aaPredicted RBP9.21□□□□□ -0.94
SVIP-204ENST00000530199 CD68P34810 354 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms