RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 ZNF713Q8N859 430 aaPredicted RBP20.18■□□□□ 0.82
CLP1-204ENST00000529773 SOCS4Q8WXH5 440 aa20.18■□□□□ 0.82
CLP1-204ENST00000529773 USP6NLQ92738 828 aa20.18■□□□□ 0.82
CLP1-204ENST00000529773 GJD2Q9UKL4 321 aa20.18■□□□□ 0.82
CLP1-204ENST00000529773 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
CLP1-204ENST00000529773 SLC15A5A6NIM6 579 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 CPLX1O14810 134 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 FMNL1O95466 1100 aaPredicted RBP20.17■□□□□ 0.82
CLP1-204ENST00000529773 ALAS1P13196 640 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 TAL1P17542 331 aaPredicted RBP20.17■□□□□ 0.82
CLP1-204ENST00000529773 PRMT2P55345 433 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 CCDC82Q8N4S0 544 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 NECAB1Q8N987 351 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 RGS22Q8NE09 1264 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 SNX21Q969T3 373 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 TRERF1Q96PN7 1200 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 SMCHD1A6NHR9 2005 aa20.17■□□□□ 0.82
CLP1-204ENST00000529773 OPLAHO14841 1288 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 HOXC6P09630 235 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 PKN1Q16512 942 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 PFKFB3Q16875 520 aaPredicted RBP20.16■□□□□ 0.82
CLP1-204ENST00000529773 MUM1L1Q5H9M0 696 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 PPP1R18Q6NYC8 613 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 OTOP1Q7RTM1 612 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 TEX2Q8IWB9 1127 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 NSUN7Q8NE18 718 aaKnown RBP20.16■□□□□ 0.82
CLP1-204ENST00000529773 PHKBQ93100 1093 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 COA7Q96BR5 231 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 LLPHQ9BRT6 129 aaKnown RBP20.16■□□□□ 0.82
CLP1-204ENST00000529773 SRRDQ9UH36 339 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 MRPL11Q9Y3B7 192 aaKnown RBP20.16■□□□□ 0.82
CLP1-204ENST00000529773 PCDHA1Q9Y5I3 950 aa20.16■□□□□ 0.82
CLP1-204ENST00000529773 V9GY48 417 aaPredicted RBP20.16■□□□□ 0.82
CLP1-204ENST00000529773 DNAJC25-GNG10A0A024R161 153 aa20.15■□□□□ 0.82
CLP1-204ENST00000529773 NFIBO00712 420 aa20.15■□□□□ 0.82
CLP1-204ENST00000529773 USH1GQ495M9 461 aa20.15■□□□□ 0.82
CLP1-204ENST00000529773 WWC2Q6AWC2 1192 aa20.15■□□□□ 0.82
CLP1-204ENST00000529773 CCAR1Q8IX12 1150 aaKnown RBP20.15■□□□□ 0.82
CLP1-204ENST00000529773 TRIM22Q8IYM9 498 aa20.15■□□□□ 0.82
CLP1-204ENST00000529773 FAM177A1Q8N128 213 aaPredicted RBP20.15■□□□□ 0.82
CLP1-204ENST00000529773 SAMD3Q8N6K7 520 aa20.15■□□□□ 0.82
CLP1-204ENST00000529773 TMX3Q96JJ7 454 aa20.15■□□□□ 0.82
CLP1-204ENST00000529773 A1CFQ9NQ94 594 aaKnown RBP20.15■□□□□ 0.82
CLP1-204ENST00000529773 IVNS1ABPQ9Y6Y0 642 aa20.15■□□□□ 0.82
CLP1-204ENST00000529773 PFASO15067 1338 aa20.15■□□□□ 0.82
CLP1-204ENST00000529773 LCTP09848 1927 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 FCER1AP12319 257 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 SCG2P13521 617 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 HOXD10P28358 340 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 IRF5Q13568 498 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 CTU1Q7Z7A3 348 aaKnown RBP20.14■□□□□ 0.81
CLP1-204ENST00000529773 SMARCC2Q8TAQ2 1214 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 MMP19Q99542 508 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 SLC26A6Q9BXS9 759 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 HOMER2Q9NSB8 354 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 BARHL2Q9NY43 387 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 DOCK3Q8IZD9 2030 aa20.14■□□□□ 0.81
CLP1-204ENST00000529773 HTTP42858 3142 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 hCG_1642624A0A1W2PR95 340 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 STXBP3O00186 592 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 DEXIO95424 95 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 IGHA2P01877 340 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 XRCC5P13010 732 aaKnown RBP20.13■□□□□ 0.81
CLP1-204ENST00000529773 ADORA2AP29274 412 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 PRKCZQ05513 592 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 SSRP1Q08945 709 aaKnown RBP20.13■□□□□ 0.81
CLP1-204ENST00000529773 MAP2K5Q13163 448 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 KCTD2Q14681 263 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 NUDT12Q9BQG2 462 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 MAP3K20Q9NYL2 800 aaKnown RBP20.13■□□□□ 0.81
CLP1-204ENST00000529773 CYP39A1Q9NYL5 469 aa20.13■□□□□ 0.81
CLP1-204ENST00000529773 ESYT2A0FGR8 921 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 FLT3LGP49771 235 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 HSD17B4P51659 736 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 CUL4AQ13619 759 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 WDR78Q5VTH9 848 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 TYW1BQ6NUM6 668 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 MCF2L2Q86YR7 1114 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 CCDC83Q8IWF9 413 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 FAM133AQ8N9E0 248 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 PIBF1Q8WXW3 757 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 APBA2Q99767 749 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 GABRQQ9UN88 632 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 DIS3Q9Y2L1 958 aaKnown RBP20.12■□□□□ 0.81
CLP1-204ENST00000529773 TRIM17Q9Y577 477 aa20.12■□□□□ 0.81
CLP1-204ENST00000529773 PTPDC1A2A3K4 754 aa20.11■□□□□ 0.81
CLP1-204ENST00000529773 PIK3CDO00329 1044 aa20.11■□□□□ 0.81
CLP1-204ENST00000529773 FDPSP14324 419 aaKnown RBP20.11■□□□□ 0.81
CLP1-204ENST00000529773 RGS2P41220 211 aa20.11■□□□□ 0.81
CLP1-204ENST00000529773 AKAP17AQ02040 695 aaKnown RBP20.11■□□□□ 0.81
CLP1-204ENST00000529773 ZNF792Q3KQV3 632 aa20.11■□□□□ 0.81
CLP1-204ENST00000529773 HEATR3Q7Z4Q2 680 aa20.11■□□□□ 0.81
CLP1-204ENST00000529773 GPKOWQ92917 476 aaPredicted RBP eCLIP20.11■□□□□ 0.81
CLP1-204ENST00000529773 CWC22Q9HCG8 908 aaKnown RBP20.11■□□□□ 0.81
CLP1-204ENST00000529773 SH3GLB2Q9NR46 395 aa20.11■□□□□ 0.81
CLP1-204ENST00000529773 PLXNA1Q9UIW2 1896 aa20.1■□□□□ 0.81
CLP1-204ENST00000529773 COBLO75128 1261 aa20.1■□□□□ 0.81
CLP1-204ENST00000529773 SLC4A3P48751 1232 aa20.1■□□□□ 0.81
CLP1-204ENST00000529773 PKN2Q16513 984 aaKnown RBP20.1■□□□□ 0.81
CLP1-204ENST00000529773 SLC30A10Q6XR72 485 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms