RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 ABRAQ8N0Z2 381 aa28.81■■■□□ 2.2
LTBP3-213ENST00000529371 RAET1EQ8TD07 263 aa28.81■■■□□ 2.2
LTBP3-213ENST00000529371 RBM27Q9P2N5 1060 aaKnown RBP28.81■■■□□ 2.2
LTBP3-213ENST00000529371 MRPL11Q9Y3B7 192 aaKnown RBP28.81■■■□□ 2.2
LTBP3-213ENST00000529371 BAZ2BQ9UIF8 2168 aaKnown RBP28.8■■■□□ 2.2
LTBP3-213ENST00000529371 TAL1P17542 331 aaPredicted RBP28.8■■■□□ 2.2
LTBP3-213ENST00000529371 RGS2P41220 211 aa28.8■■■□□ 2.2
LTBP3-213ENST00000529371 GRB14Q14449 540 aa28.8■■■□□ 2.2
LTBP3-213ENST00000529371 PKN2Q16513 984 aaKnown RBP28.8■■■□□ 2.2
LTBP3-213ENST00000529371 ANKRD35Q8N283 1001 aa28.8■■■□□ 2.2
LTBP3-213ENST00000529371 DDX11Q96FC9 970 aa28.8■■■□□ 2.2
LTBP3-213ENST00000529371 SLC5A4Q9NY91 659 aa28.8■■■□□ 2.2
LTBP3-213ENST00000529371 CDKL5O76039 1030 aa28.79■■■□□ 2.2
LTBP3-213ENST00000529371 FLT3LGP49771 235 aa28.79■■■□□ 2.2
LTBP3-213ENST00000529371 DPP9Q86TI2 863 aa28.79■■■□□ 2.2
LTBP3-213ENST00000529371 TRIM22Q8IYM9 498 aa28.79■■■□□ 2.2
LTBP3-213ENST00000529371 ZSCAN31Q96LW9 406 aaPredicted RBP28.79■■■□□ 2.2
LTBP3-213ENST00000529371 GABRQQ9UN88 632 aa28.79■■■□□ 2.2
LTBP3-213ENST00000529371 PCDHA1Q9Y5I3 950 aa28.79■■■□□ 2.2
LTBP3-213ENST00000529371 ADORA2AP29274 412 aa28.78■■■□□ 2.2
LTBP3-213ENST00000529371 MCM2P49736 904 aa28.78■■■□□ 2.2
LTBP3-213ENST00000529371 SCRN1Q12765 414 aa28.78■■■□□ 2.2
LTBP3-213ENST00000529371 MAP2K5Q13163 448 aa28.78■■■□□ 2.2
LTBP3-213ENST00000529371 ME3Q16798 604 aa28.78■■■□□ 2.2
LTBP3-213ENST00000529371 MUM1L1Q5H9M0 696 aa28.78■■■□□ 2.2
LTBP3-213ENST00000529371 MORN1Q5T089 497 aa28.78■■■□□ 2.2
LTBP3-213ENST00000529371 NSMFQ6X4W1 530 aa28.78■■■□□ 2.2
LTBP3-213ENST00000529371 V9GY48 417 aaPredicted RBP28.78■■■□□ 2.2
LTBP3-213ENST00000529371 PFASO15067 1338 aa28.77■■■□□ 2.2
LTBP3-213ENST00000529371 IFNAR1P17181 557 aa28.77■■■□□ 2.2
LTBP3-213ENST00000529371 FUT2Q10981 343 aa28.77■■■□□ 2.2
LTBP3-213ENST00000529371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.77■■■□□ 2.2
LTBP3-213ENST00000529371 APBA2Q99767 749 aa28.77■■■□□ 2.2
LTBP3-213ENST00000529371 SH2B1Q9NRF2 756 aaPredicted RBP28.77■■■□□ 2.2
LTBP3-213ENST00000529371 PTPN22Q9Y2R2 807 aa28.77■■■□□ 2.2
LTBP3-213ENST00000529371 ZNF236Q9UL36 1845 aa28.77■■■□□ 2.2
LTBP3-213ENST00000529371 hCG_1642624A0A1W2PR95 340 aa28.76■■■□□ 2.19
LTBP3-213ENST00000529371 PPP1R11O60927 126 aaPredicted RBP28.76■■■□□ 2.19
LTBP3-213ENST00000529371 CYP2B6P20813 491 aa28.76■■■□□ 2.19
LTBP3-213ENST00000529371 SSRP1Q08945 709 aaKnown RBP28.76■■■□□ 2.19
LTBP3-213ENST00000529371 FBXO46Q6PJ61 603 aaPredicted RBP28.76■■■□□ 2.19
LTBP3-213ENST00000529371 HEATR3Q7Z4Q2 680 aa28.76■■■□□ 2.19
LTBP3-213ENST00000529371 MCF2L2Q86YR7 1114 aa28.76■■■□□ 2.19
LTBP3-213ENST00000529371 GTF3C6Q969F1 213 aa28.76■■■□□ 2.19
LTBP3-213ENST00000529371 SLC26A6Q9BXS9 759 aa28.76■■■□□ 2.19
LTBP3-213ENST00000529371 RNF26Q9BY78 433 aaPredicted RBP28.76■■■□□ 2.19
LTBP3-213ENST00000529371 GJD2Q9UKL4 321 aa28.76■■■□□ 2.19
LTBP3-213ENST00000529371 NFIBO00712 420 aa28.75■■■□□ 2.19
LTBP3-213ENST00000529371 LARGE1O95461 756 aa28.75■■■□□ 2.19
LTBP3-213ENST00000529371 IRF5Q13568 498 aa28.75■■■□□ 2.19
LTBP3-213ENST00000529371 NECAB1Q8N987 351 aa28.75■■■□□ 2.19
LTBP3-213ENST00000529371 PHKBQ93100 1093 aa28.75■■■□□ 2.19
LTBP3-213ENST00000529371 A1CFQ9NQ94 594 aaKnown RBP28.75■■■□□ 2.19
LTBP3-213ENST00000529371 PTCH2Q9Y6C5 1203 aa28.75■■■□□ 2.19
LTBP3-213ENST00000529371 DOCK3Q8IZD9 2030 aa28.74■■■□□ 2.19
LTBP3-213ENST00000529371 PTPDC1A2A3K4 754 aa28.74■■■□□ 2.19
LTBP3-213ENST00000529371 PRPF3O43395 683 aaKnown RBP28.74■■■□□ 2.19
LTBP3-213ENST00000529371 NTRK3Q16288 839 aa28.74■■■□□ 2.19
LTBP3-213ENST00000529371 CLEC4DQ8WXI8 215 aa28.74■■■□□ 2.19
LTBP3-213ENST00000529371 hCG_1984214I3L0E3 225 aa28.73■■■□□ 2.19
LTBP3-213ENST00000529371 RNF207Q6ZRF8 634 aa28.73■■■□□ 2.19
LTBP3-213ENST00000529371 ZNF713Q8N859 430 aaPredicted RBP28.73■■■□□ 2.19
LTBP3-213ENST00000529371 USP6NLQ92738 828 aa28.73■■■□□ 2.19
LTBP3-213ENST00000529371 POTEB2H3BUK9 544 aa28.72■■■□□ 2.19
LTBP3-213ENST00000529371 PGK2P07205 417 aa28.72■■■□□ 2.19
LTBP3-213ENST00000529371 XRCC5P13010 732 aaKnown RBP28.72■■■□□ 2.19
LTBP3-213ENST00000529371 TRMT44Q8IYL2 757 aaKnown RBP28.72■■■□□ 2.19
LTBP3-213ENST00000529371 GPKOWQ92917 476 aaPredicted RBP eCLIP28.72■■■□□ 2.19
LTBP3-213ENST00000529371 MAF1Q9H063 256 aa28.72■■■□□ 2.19
LTBP3-213ENST00000529371 ADCY3O60266 1144 aa28.71■■■□□ 2.19
LTBP3-213ENST00000529371 PPFIA3O75145 1194 aa28.71■■■□□ 2.19
LTBP3-213ENST00000529371 HOXC6P09630 235 aa28.71■■■□□ 2.19
LTBP3-213ENST00000529371 SCG2P13521 617 aa28.71■■■□□ 2.19
LTBP3-213ENST00000529371 PFKFB3Q16875 520 aaPredicted RBP28.71■■■□□ 2.19
LTBP3-213ENST00000529371 SLAIN1Q8ND83 568 aa28.71■■■□□ 2.19
LTBP3-213ENST00000529371 CYP39A1Q9NYL5 469 aa28.71■■■□□ 2.19
LTBP3-213ENST00000529371 SMCHD1A6NHR9 2005 aa28.7■■■□□ 2.19
LTBP3-213ENST00000529371 RBBP6Q7Z6E9 1792 aaKnown RBP28.7■■■□□ 2.19
LTBP3-213ENST00000529371 COBLO75128 1261 aa28.7■■■□□ 2.18
LTBP3-213ENST00000529371 CALML3P27482 149 aa28.7■■■□□ 2.18
LTBP3-213ENST00000529371 NAPAP54920 295 aa28.7■■■□□ 2.18
LTBP3-213ENST00000529371 BAATQ14032 418 aaPredicted RBP28.7■■■□□ 2.18
LTBP3-213ENST00000529371 WWC2Q6AWC2 1192 aa28.7■■■□□ 2.18
LTBP3-213ENST00000529371 PPP1R18Q6NYC8 613 aa28.7■■■□□ 2.18
LTBP3-213ENST00000529371 CCDC83Q8IWF9 413 aa28.7■■■□□ 2.18
LTBP3-213ENST00000529371 RGS22Q8NE09 1264 aa28.7■■■□□ 2.18
LTBP3-213ENST00000529371 MCOLN1Q9GZU1 580 aa28.7■■■□□ 2.18
LTBP3-213ENST00000529371 DEXIO95424 95 aa28.69■■■□□ 2.18
LTBP3-213ENST00000529371 CFBP00751 764 aa28.69■■■□□ 2.18
LTBP3-213ENST00000529371 SLC9C1Q4G0N8 1177 aa28.69■■■□□ 2.18
LTBP3-213ENST00000529371 PXYLP1Q8TE99 480 aa28.69■■■□□ 2.18
LTBP3-213ENST00000529371 CCDC12Q8WUD4 166 aaPredicted RBP28.69■■■□□ 2.18
LTBP3-213ENST00000529371 CUL5Q93034 780 aa28.69■■■□□ 2.18
LTBP3-213ENST00000529371 BIN2Q9UBW5 565 aaPredicted RBP28.69■■■□□ 2.18
LTBP3-213ENST00000529371 DIS3Q9Y2L1 958 aaKnown RBP28.69■■■□□ 2.18
LTBP3-213ENST00000529371 DNAJC25-GNG10A0A024R161 153 aa28.68■■■□□ 2.18
LTBP3-213ENST00000529371 GRK4P32298 578 aa28.68■■■□□ 2.18
LTBP3-213ENST00000529371 RPS6P62753 249 aaKnown RBP28.68■■■□□ 2.18
LTBP3-213ENST00000529371 ZNF792Q3KQV3 632 aa28.68■■■□□ 2.18
LTBP3-213ENST00000529371 SLC30A10Q6XR72 485 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms