RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 SLC3A2P08195 630 aaKnown RBP8.88□□□□□ -0.99
C11orf88-203ENST00000529167 SCN4AP35499 1836 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 ADKP55263 362 aaKnown RBP8.88□□□□□ -0.99
C11orf88-203ENST00000529167 AKAP17AQ02040 695 aaKnown RBP8.88□□□□□ -0.99
C11orf88-203ENST00000529167 TOB2Q14106 344 aaPredicted RBP8.88□□□□□ -0.99
C11orf88-203ENST00000529167 MYBPC3Q14896 1274 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 PPP4R3AQ6IN85 833 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 RAD9BQ6WBX8 426 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 Q6ZUG5 572 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 NEK9Q8TD19 979 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 BRF1Q92994 677 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 PHACTR1Q9C0D0 580 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 NOP53Q9NZM5 478 aaKnown RBP8.88□□□□□ -0.99
C11orf88-203ENST00000529167 TMOD4Q9NZQ9 345 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 SYNPO2Q9UMS6 1093 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 UBN2Q6ZU65 1347 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 SSBP05455 408 aaKnown RBP eCLIP8.88□□□□□ -0.99
C11orf88-203ENST00000529167 ABL2P42684 1182 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 ZNF268Q14587 947 aaPredicted RBP8.88□□□□□ -0.99
C11orf88-203ENST00000529167 MTF1Q14872 753 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 KIAA0753Q2KHM9 967 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 KIAA0825Q8IV33 1275 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 OGFOD1Q8N543 542 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 USHBP1Q8N6Y0 703 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 EHBP1Q8NDI1 1231 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 TAF4BQ92750 862 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 ARL8AQ96BM9 186 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 TBC1D31Q96DN5 1066 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 COG3Q96JB2 828 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 RNPC3Q96LT9 517 aaKnown RBP8.88□□□□□ -0.99
C11orf88-203ENST00000529167 USP28Q96RU2 1077 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.88□□□□□ -0.99
C11orf88-203ENST00000529167 ASAP1Q9ULH1 1129 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 PCDHA7Q9UN72 937 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 ZNF510Q9Y2H8 683 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 FER1L6Q2WGJ9 1857 aa8.88□□□□□ -0.99
C11orf88-203ENST00000529167 PCNTO95613 3336 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 DLG5Q8TDM6 1919 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 RASSF10A6NK89 507 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 RAB11FIP3O75154 756 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 SMIM24O75264 130 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 ZKSCAN1P17029 563 aaPredicted RBP8.87□□□□□ -0.99
C11orf88-203ENST00000529167 MDH1P40925 334 aaKnown RBP8.87□□□□□ -0.99
C11orf88-203ENST00000529167 NDUFA8P51970 172 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 ATP8B2P98198 1209 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 APBA1Q02410 837 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 PTH1RQ03431 593 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 SGSM1Q2NKQ1 1148 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 TSNAXIP1Q2TAA8 658 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 CNTROBQ8N137 903 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 CCT6BQ92526 530 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 CYFIP2Q96F07 1278 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 CDC5LQ99459 802 aaKnown RBP8.87□□□□□ -0.99
C11orf88-203ENST00000529167 TRIM4Q9C037 500 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 KCNMB3Q9NPA1 279 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 AFDNP55196 1824 aaKnown RBP8.87□□□□□ -0.99
C11orf88-203ENST00000529167 SOWAHDA6NJG2 315 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 VIMP08670 466 aaKnown RBP8.87□□□□□ -0.99
C11orf88-203ENST00000529167 DYNC1I2Q13409 638 aaKnown RBP8.87□□□□□ -0.99
C11orf88-203ENST00000529167 LBRQ14739 615 aaKnown RBP8.87□□□□□ -0.99
C11orf88-203ENST00000529167 NCAPH2Q6IBW4 605 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 ARMC9Q7Z3E5 817 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 C17orf50Q8WW18 174 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 TMOD3Q9NYL9 352 aa8.87□□□□□ -0.99
C11orf88-203ENST00000529167 A0A0U1RQJ8 604 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 PENKP01210 267 aaPredicted RBP8.86□□□□□ -0.99
C11orf88-203ENST00000529167 GNAI2P04899 355 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 CHRNA5P30532 468 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 RFC4P35249 363 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 GNAQP50148 359 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 PABPC4Q13310 644 aaKnown RBP eCLIP8.86□□□□□ -0.99
C11orf88-203ENST00000529167 GNPTABQ3T906 1256 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 GLE1Q53GS7 698 aaKnown RBP8.86□□□□□ -0.99
C11orf88-203ENST00000529167 MAMSTRQ6ZN01 415 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 CD302Q8IX05 232 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 RUFY2Q8WXA3 655 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 ATRIPQ8WXE1 791 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 CAVIN3Q969G5 261 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 FBXW7Q969H0 707 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 SLC4A9Q96Q91 983 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 NDST4Q9H3R1 872 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 ZWILCHQ9H900 591 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 SPG7Q9UQ90 795 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 GMEB1Q9Y692 573 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 USP42Q9H9J4 1324 aaKnown RBP8.86□□□□□ -0.99
C11orf88-203ENST00000529167 NFKBIEO00221 500 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 ZNF18P17022 549 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 TM4SF1P30408 202 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 CMPK2Q5EBM0 449 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 PAPD7Q5XG87 772 aaKnown RBP8.86□□□□□ -0.99
C11orf88-203ENST00000529167 TMEM110Q86TL2 294 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 UHMK1Q8TAS1 419 aaKnown RBP8.86□□□□□ -0.99
C11orf88-203ENST00000529167 MTRQ99707 1265 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 DUSP9Q99956 384 aaKnown RBP8.86□□□□□ -0.99
C11orf88-203ENST00000529167 A0A1B0GVG6 124 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 TMEM88BA6NKF7 163 aa8.86□□□□□ -0.99
C11orf88-203ENST00000529167 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.86□□□□□ -0.99
C11orf88-203ENST00000529167 AKR1B15C9JRZ8 316 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms