RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 MAF1Q9H063 256 aa25.35■■□□□ 1.65
PACSIN3-205ENST00000528462 ZMYND12Q9H0C1 365 aa25.35■■□□□ 1.65
PACSIN3-205ENST00000528462 VPS54Q9P1Q0 977 aa25.35■■□□□ 1.65
PACSIN3-205ENST00000528462 DDIT3P35638 169 aa25.34■■□□□ 1.65
PACSIN3-205ENST00000528462 NAPAP54920 295 aa25.34■■□□□ 1.65
PACSIN3-205ENST00000528462 CRHR2Q13324 411 aa25.34■■□□□ 1.65
PACSIN3-205ENST00000528462 USH1GQ495M9 461 aa25.34■■□□□ 1.65
PACSIN3-205ENST00000528462 GALNT17Q6IS24 598 aa25.34■■□□□ 1.65
PACSIN3-205ENST00000528462 GPRC5AQ8NFJ5 357 aa25.34■■□□□ 1.65
PACSIN3-205ENST00000528462 PAGR1Q9BTK6 254 aa25.34■■□□□ 1.65
PACSIN3-205ENST00000528462 MRPL11Q9Y3B7 192 aaKnown RBP25.34■■□□□ 1.65
PACSIN3-205ENST00000528462 SLC25A27O95847 323 aa25.33■■□□□ 1.65
PACSIN3-205ENST00000528462 BCRP11274 1271 aa25.33■■□□□ 1.65
PACSIN3-205ENST00000528462 SYT1P21579 422 aa25.33■■□□□ 1.65
PACSIN3-205ENST00000528462 TRIM29Q14134 588 aa25.33■■□□□ 1.65
PACSIN3-205ENST00000528462 C17orf99Q6UX52 265 aa25.33■■□□□ 1.65
PACSIN3-205ENST00000528462 PHF20Q9BVI0 1012 aa25.33■■□□□ 1.65
PACSIN3-205ENST00000528462 GLT8D2Q9H1C3 349 aa25.33■■□□□ 1.65
PACSIN3-205ENST00000528462 CALML3P27482 149 aa25.32■■□□□ 1.64
PACSIN3-205ENST00000528462 ANKRD13CQ8N6S4 541 aa25.32■■□□□ 1.64
PACSIN3-205ENST00000528462 SHCBP1Q8NEM2 672 aa25.32■■□□□ 1.64
PACSIN3-205ENST00000528462 MOV10L1Q9BXT6 1211 aaKnown RBP25.32■■□□□ 1.64
PACSIN3-205ENST00000528462 RIPK3Q9Y572 518 aa25.32■■□□□ 1.64
PACSIN3-205ENST00000528462 CCNA1P78396 465 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 GHRHRQ02643 423 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 PLS1Q14651 629 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 Q3C1V9 767 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 KRT40Q6A162 431 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 CHST13Q8NET6 341 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 GJB4Q9NTQ9 266 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 SMCHD1A6NHR9 2005 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 OPLAHO14841 1288 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 MMP1P03956 469 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 ALAS1P13196 640 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 GNA11P29992 359 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 NPY5RQ15761 445 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 SAMD3Q8N6K7 520 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 DNAJC5GQ8N7S2 189 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 DAGLBQ8NCG7 672 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 CLEC4DQ8WXI8 215 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 TRERF1Q96PN7 1200 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 FBXO40Q9UH90 709 aa25.31■■□□□ 1.64
PACSIN3-205ENST00000528462 MROH8Q9H579 483 aa25.3■■□□□ 1.64
PACSIN3-205ENST00000528462 PSTPIP2Q9H939 334 aa25.3■■□□□ 1.64
PACSIN3-205ENST00000528462 C6orf50Q9HD87 102 aa25.3■■□□□ 1.64
PACSIN3-205ENST00000528462 RIC8AQ9NPQ8 531 aa25.3■■□□□ 1.64
PACSIN3-205ENST00000528462 RNF146Q9NTX7 359 aa25.3■■□□□ 1.64
PACSIN3-205ENST00000528462 SMCO2A6NFE2 343 aa25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 STX6O43752 255 aa25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 PEX10O60683 326 aa25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 MRPL12P52815 198 aaKnown RBP25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 NLRP5P59047 1200 aa25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 MCF2L2Q86YR7 1114 aa25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 BICD2Q8TD16 824 aa25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 RNF186Q9NXI6 227 aa25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 SAGE1Q9NXZ1 904 aa25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 MAP3K20Q9NYL2 800 aaKnown RBP25.29■■□□□ 1.64
PACSIN3-205ENST00000528462 H3BQV1 296 aa25.28■■□□□ 1.64
PACSIN3-205ENST00000528462 PIK3CDO00329 1044 aa25.28■■□□□ 1.64
PACSIN3-205ENST00000528462 MAP2K1Q02750 393 aaPredicted RBP25.28■■□□□ 1.64
PACSIN3-205ENST00000528462 IFFO2Q5TF58 517 aa25.28■■□□□ 1.64
PACSIN3-205ENST00000528462 CUL5Q93034 780 aa25.28■■□□□ 1.64
PACSIN3-205ENST00000528462 ACAD9Q9H845 621 aa25.28■■□□□ 1.64
PACSIN3-205ENST00000528462 CPA4Q9UI42 421 aa25.28■■□□□ 1.64
PACSIN3-205ENST00000528462 PCDHA4Q9UN74 947 aa25.28■■□□□ 1.64
PACSIN3-205ENST00000528462 KCNJ14Q9UNX9 436 aa25.28■■□□□ 1.64
PACSIN3-205ENST00000528462 TAL1P17542 331 aaPredicted RBP25.27■■□□□ 1.64
PACSIN3-205ENST00000528462 ERCC3P19447 782 aa25.27■■□□□ 1.64
PACSIN3-205ENST00000528462 ADCY7P51828 1080 aa25.27■■□□□ 1.64
PACSIN3-205ENST00000528462 CIZ1Q9ULV3 898 aaPredicted RBP25.27■■□□□ 1.64
PACSIN3-205ENST00000528462 NFIBO00712 420 aa25.27■■□□□ 1.64
PACSIN3-205ENST00000528462 SAFBQ15424 915 aaKnown RBP eCLIP25.27■■□□□ 1.64
PACSIN3-205ENST00000528462 MUM1L1Q5H9M0 696 aa25.27■■□□□ 1.64
PACSIN3-205ENST00000528462 BRMS1Q9HCU9 246 aa25.27■■□□□ 1.64
PACSIN3-205ENST00000528462 HOMER2Q9NSB8 354 aa25.27■■□□□ 1.64
PACSIN3-205ENST00000528462 M0R2N6 131 aa25.26■■□□□ 1.63
PACSIN3-205ENST00000528462 MEIS2O14770 477 aa25.26■■□□□ 1.63
PACSIN3-205ENST00000528462 HSD17B4P51659 736 aa25.26■■□□□ 1.63
PACSIN3-205ENST00000528462 PORCNQ9H237 461 aa25.26■■□□□ 1.63
PACSIN3-205ENST00000528462 MTMR6Q9Y217 621 aa25.26■■□□□ 1.63
PACSIN3-205ENST00000528462 TRPA1O75762 1119 aa25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 MAPK4P31152 587 aa25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 CLK2P49760 499 aaKnown RBP25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 GUCY1B3Q02153 619 aa25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 MCTP2Q6DN12 878 aa25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 NCAPG2Q86XI2 1143 aa25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 DIS3L2Q8IYB7 885 aaKnown RBP25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 BLIDQ8IZY5 108 aa25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 FOXP1Q9H334 677 aaPredicted RBP25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 R3HDMLQ9H3Y0 253 aa25.25■■□□□ 1.63
PACSIN3-205ENST00000528462 U2AF2P26368 475 aaKnown RBP eCLIP25.24■■□□□ 1.63
PACSIN3-205ENST00000528462 FOSBP53539 338 aa25.24■■□□□ 1.63
PACSIN3-205ENST00000528462 NOM1Q5C9Z4 860 aaKnown RBP25.24■■□□□ 1.63
PACSIN3-205ENST00000528462 REXO1Q8N1G1 1221 aaKnown RBP25.24■■□□□ 1.63
PACSIN3-205ENST00000528462 GCOM1H8Y6P7 765 aaPredicted RBP25.23■■□□□ 1.63
PACSIN3-205ENST00000528462 POLR2MP0CAP2 368 aa25.23■■□□□ 1.63
PACSIN3-205ENST00000528462 KRT2P35908 639 aa25.23■■□□□ 1.63
PACSIN3-205ENST00000528462 NUCB2P80303 420 aa25.23■■□□□ 1.63
PACSIN3-205ENST00000528462 ABRAQ8N0Z2 381 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms