RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 BMP8BP34820 402 aa18.84■□□□□ 0.61
CTSB-213ENST00000527215 SEC23AQ15436 765 aa18.84■□□□□ 0.61
CTSB-213ENST00000527215 IFIT1BQ5T764 474 aaKnown RBP18.84■□□□□ 0.61
CTSB-213ENST00000527215 RBM8AQ9Y5S9 174 aaKnown RBP18.84■□□□□ 0.61
CTSB-213ENST00000527215 WDR19Q8NEZ3 1342 aa18.83■□□□□ 0.61
CTSB-213ENST00000527215 SYNRGQ9UMZ2 1314 aa18.83■□□□□ 0.61
CTSB-213ENST00000527215 E7EWF7 191 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 ADCYAP1R1P41586 468 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 CCDC144BQ3MJ40 725 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 ASPRV1Q53RT3 343 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 BMP2KLQ5H9B9 411 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 STOX1Q6ZVD7 989 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 RNF180Q86T96 592 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 FERMT2Q96AC1 680 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 PURBQ96QR8 312 aaKnown RBP18.83■□□□□ 0.6
CTSB-213ENST00000527215 GDF15Q99988 308 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 ESYT1Q9BSJ8 1104 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 KATNBL1Q9H079 304 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 PNMA2Q9UL42 364 aa18.83■□□□□ 0.6
CTSB-213ENST00000527215 DDX49Q9Y6V7 483 aaKnown RBP18.83■□□□□ 0.6
CTSB-213ENST00000527215 ASB14A6NK59 587 aa18.82■□□□□ 0.6
CTSB-213ENST00000527215 ADCY6O43306 1168 aa18.82■□□□□ 0.6
CTSB-213ENST00000527215 ADAMTS4O75173 837 aa18.82■□□□□ 0.6
CTSB-213ENST00000527215 PARP1P09874 1014 aaKnown RBP18.82■□□□□ 0.6
CTSB-213ENST00000527215 BAATQ14032 418 aaPredicted RBP18.82■□□□□ 0.6
CTSB-213ENST00000527215 KIAA1211Q6ZU35 1233 aa18.82■□□□□ 0.6
CTSB-213ENST00000527215 RALYLQ86SE5 291 aaKnown RBP18.82■□□□□ 0.6
CTSB-213ENST00000527215 NCOA7Q8NI08 942 aa18.82■□□□□ 0.6
CTSB-213ENST00000527215 CLEC4DQ8WXI8 215 aa18.82■□□□□ 0.6
CTSB-213ENST00000527215 BAZ2BQ9UIF8 2168 aaKnown RBP18.82■□□□□ 0.6
CTSB-213ENST00000527215 KIAA1217Q5T5P2 1943 aa18.81■□□□□ 0.6
CTSB-213ENST00000527215 PTPDC1A2A3K4 754 aa18.81■□□□□ 0.6
CTSB-213ENST00000527215 DUSP11O75319 330 aaKnown RBP18.81■□□□□ 0.6
CTSB-213ENST00000527215 RTP1P59025 263 aa18.81■□□□□ 0.6
CTSB-213ENST00000527215 CDC37Q16543 378 aaPredicted RBP18.81■□□□□ 0.6
CTSB-213ENST00000527215 USH1GQ495M9 461 aa18.81■□□□□ 0.6
CTSB-213ENST00000527215 SLC30A10Q6XR72 485 aa18.81■□□□□ 0.6
CTSB-213ENST00000527215 SLC39A5Q6ZMH5 540 aa18.81■□□□□ 0.6
CTSB-213ENST00000527215 ADGRF4Q8IZF3 695 aa18.81■□□□□ 0.6
CTSB-213ENST00000527215 LSG1Q9H089 658 aaKnown RBP18.81■□□□□ 0.6
CTSB-213ENST00000527215 PHF24Q9UPV7 400 aa18.81■□□□□ 0.6
CTSB-213ENST00000527215 IFIT3O14879 490 aaKnown RBP18.8■□□□□ 0.6
CTSB-213ENST00000527215 DHX16O60231 1041 aaKnown RBP18.8■□□□□ 0.6
CTSB-213ENST00000527215 RNF207Q6ZRF8 634 aa18.8■□□□□ 0.6
CTSB-213ENST00000527215 CHST3Q7LGC8 479 aa18.8■□□□□ 0.6
CTSB-213ENST00000527215 CCDC136Q96JN2 1154 aa18.8■□□□□ 0.6
CTSB-213ENST00000527215 ATP11BQ9Y2G3 1177 aa18.8■□□□□ 0.6
CTSB-213ENST00000527215 ERICH2A1L162 156 aa18.79■□□□□ 0.6
CTSB-213ENST00000527215 MYADML2A6NDP7 307 aa18.79■□□□□ 0.6
CTSB-213ENST00000527215 CALML3P27482 149 aa18.79■□□□□ 0.6
CTSB-213ENST00000527215 MAGEA10P43363 369 aaPredicted RBP18.79■□□□□ 0.6
CTSB-213ENST00000527215 ALDH5A1P51649 535 aaPredicted RBP18.79■□□□□ 0.6
CTSB-213ENST00000527215 MB21D2Q8IYB1 491 aaPredicted RBP18.79■□□□□ 0.6
CTSB-213ENST00000527215 STAG2Q8N3U4 1231 aa18.79■□□□□ 0.6
CTSB-213ENST00000527215 JMJD4Q9H9V9 463 aa18.79■□□□□ 0.6
CTSB-213ENST00000527215 SENP2Q9HC62 589 aa18.79■□□□□ 0.6
CTSB-213ENST00000527215 VAT1LQ9HCJ6 419 aa18.79■□□□□ 0.6
CTSB-213ENST00000527215 ADD3Q9UEY8 706 aaKnown RBP18.79■□□□□ 0.6
CTSB-213ENST00000527215 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 A0A1W2PQ45 241 aaPredicted RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 A0A1W2PQY0 241 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 C6orf222P0C671 652 aaPredicted RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 ANTXR2P58335 489 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 RPS6P62753 249 aaKnown RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 IRX5P78411 483 aaPredicted RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 WTAPQ15007 396 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 SART3Q15020 963 aaKnown RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 SNX17Q15036 470 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 QRICH1Q2TAL8 776 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 TRIM60Q495X7 471 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 EEPD1Q7L9B9 569 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 FBXO16Q8IX29 292 aaPredicted RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 KLHDC9Q8NEP7 349 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 MORC4Q8TE76 937 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 TSEN34Q9BSV6 310 aaKnown RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 UBE2OQ9C0C9 1292 aaKnown RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 UPF3AQ9H1J1 476 aaKnown RBP18.78■□□□□ 0.6
CTSB-213ENST00000527215 ANO2Q9NQ90 1003 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 MAD2L2Q9UI95 211 aa18.78■□□□□ 0.6
CTSB-213ENST00000527215 ABCB11O95342 1321 aa18.77■□□□□ 0.6
CTSB-213ENST00000527215 KLRF2D3W0D1 207 aa18.77■□□□□ 0.6
CTSB-213ENST00000527215 ACLYP53396 1101 aa18.77■□□□□ 0.6
CTSB-213ENST00000527215 TNFAIP2Q03169 654 aa18.77■□□□□ 0.6
CTSB-213ENST00000527215 GPR153Q6NV75 609 aa18.77■□□□□ 0.6
CTSB-213ENST00000527215 TDHQ8IZJ6 230 aa18.77■□□□□ 0.6
CTSB-213ENST00000527215 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
CTSB-213ENST00000527215 PALM3A6NDB9 673 aaPredicted RBP18.76■□□□□ 0.59
CTSB-213ENST00000527215 SOX1O00570 391 aaPredicted RBP18.76■□□□□ 0.59
CTSB-213ENST00000527215 SLC27A2O14975 620 aa18.76■□□□□ 0.59
CTSB-213ENST00000527215 CST5P28325 142 aaPredicted RBP18.76■□□□□ 0.59
CTSB-213ENST00000527215 GJA9P57773 515 aa18.76■□□□□ 0.59
CTSB-213ENST00000527215 GRM4Q14833 912 aa18.76■□□□□ 0.59
CTSB-213ENST00000527215 KCNA10Q16322 511 aa18.76■□□□□ 0.59
CTSB-213ENST00000527215 TMEM67Q5HYA8 995 aa18.76■□□□□ 0.59
CTSB-213ENST00000527215 C1orf53Q5VUE5 145 aa18.76■□□□□ 0.59
CTSB-213ENST00000527215 CCSAPQ6IQ19 270 aaPredicted RBP18.76■□□□□ 0.59
CTSB-213ENST00000527215 TAPT1Q6NXT6 567 aa18.76■□□□□ 0.59
CTSB-213ENST00000527215 NOL8Q76FK4 1167 aaKnown RBP18.76■□□□□ 0.59
CTSB-213ENST00000527215 FBXO11Q86XK2 927 aa18.76■□□□□ 0.59
CTSB-213ENST00000527215 SPC25Q9HBM1 224 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms