RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 PAWRQ96IZ0 340 aaKnown RBP12.54□□□□□ -0.4
SYVN1-208ENST00000527142 UBA5Q9GZZ9 404 aa12.54□□□□□ -0.4
SYVN1-208ENST00000527142 LY9Q9HBG7 655 aa12.54□□□□□ -0.4
SYVN1-208ENST00000527142 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
SYVN1-208ENST00000527142 PLXNA1Q9UIW2 1896 aa12.54□□□□□ -0.4
SYVN1-208ENST00000527142 ABCB11O95342 1321 aa12.54□□□□□ -0.4
SYVN1-208ENST00000527142 KLRF2D3W0D1 207 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 SH2B2O14492 632 aaPredicted RBP12.53□□□□□ -0.4
SYVN1-208ENST00000527142 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
SYVN1-208ENST00000527142 DHX16O60231 1041 aaKnown RBP12.53□□□□□ -0.4
SYVN1-208ENST00000527142 SNAI1O95863 264 aaPredicted RBP12.53□□□□□ -0.4
SYVN1-208ENST00000527142 ZNF865P0CJ78 1059 aaPredicted RBP12.53□□□□□ -0.4
SYVN1-208ENST00000527142 RARBP10826 455 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 AKR1A1P14550 325 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 KIF5BP33176 963 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 TRAF1Q13077 416 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 QRICH1Q2TAL8 776 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 HABP4Q5JVS0 413 aaKnown RBP12.53□□□□□ -0.4
SYVN1-208ENST00000527142 ARMCX2Q7L311 632 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 CHST3Q7LGC8 479 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 ARRDC4Q8NCT1 418 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 CLEC4DQ8WXI8 215 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 CPVLQ9H3G5 476 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 ABHD16BQ9H3Z7 469 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 C11orf49Q9H6J7 331 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 JMJD4Q9H9V9 463 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 SENP2Q9HC62 589 aa12.53□□□□□ -0.4
SYVN1-208ENST00000527142 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
SYVN1-208ENST00000527142 ADD3Q9UEY8 706 aaKnown RBP12.53□□□□□ -0.4
SYVN1-208ENST00000527142 SOWAHBA6NEL2 793 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
SYVN1-208ENST00000527142 CALM1P0DP23 149 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 CALM2P0DP24 149 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 CALM3P0DP25 149 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 TAL1P17542 331 aaPredicted RBP12.52□□□□□ -0.41
SYVN1-208ENST00000527142 USH1GQ495M9 461 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 PRAMEF19Q5SWL8 479 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 ZNF654Q8IZM8 581 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 MORC4Q8TE76 937 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 KCNB2Q92953 911 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 NEK1Q96PY6 1258 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 ZHX1Q9UKY1 873 aaPredicted RBP12.52□□□□□ -0.41
SYVN1-208ENST00000527142 FRMPD3Q5JV73 1810 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 ASTN1O14525 1302 aa12.52□□□□□ -0.41
SYVN1-208ENST00000527142 ZNFX1Q9P2E3 1918 aaKnown RBP12.51□□□□□ -0.41
SYVN1-208ENST00000527142 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 KBTBD13C9JR72 458 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 ZBTB5O15062 677 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 ACVR2BQ13705 512 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 BAATQ14032 418 aaPredicted RBP12.51□□□□□ -0.41
SYVN1-208ENST00000527142 SLC30A10Q6XR72 485 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 RNF207Q6ZRF8 634 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 SGMS1Q86VZ5 419 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 MCF2L2Q86YR7 1114 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 CTCFLQ8NI51 663 aaPredicted RBP12.51□□□□□ -0.41
SYVN1-208ENST00000527142 MPHOSPH6Q99547 160 aaKnown RBP12.51□□□□□ -0.41
SYVN1-208ENST00000527142 LZTS2Q9BRK4 669 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 AMNQ9BXJ7 453 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 RIOX1Q9H6W3 641 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 XPNPEP3Q9NQH7 507 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 FAM184BQ9ULE4 1060 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 MRPL11Q9Y3B7 192 aaKnown RBP12.51□□□□□ -0.41
SYVN1-208ENST00000527142 NR2E3Q9Y5X4 410 aa12.51□□□□□ -0.41
SYVN1-208ENST00000527142 B4DLN1 442 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 DUSP11O75319 330 aaKnown RBP12.5□□□□□ -0.41
SYVN1-208ENST00000527142 SMARCA1P28370 1054 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 HSPA4P34932 840 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 GNAQP50148 359 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 MRPL12P52815 198 aaKnown RBP12.5□□□□□ -0.41
SYVN1-208ENST00000527142 RPS6P62753 249 aaKnown RBP12.5□□□□□ -0.41
SYVN1-208ENST00000527142 GHRHRQ02643 423 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 DHX32Q7L7V1 743 aaKnown RBP12.5□□□□□ -0.41
SYVN1-208ENST00000527142 RNF180Q86T96 592 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 DNERQ8NFT8 737 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 DPF3Q92784 378 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 VTA1Q9NP79 307 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
SYVN1-208ENST00000527142 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 LRRC37A2A6NM11 1700 aa12.5□□□□□ -0.41
SYVN1-208ENST00000527142 SYNRGQ9UMZ2 1314 aa12.49□□□□□ -0.41
SYVN1-208ENST00000527142 EVI5O60447 810 aa12.49□□□□□ -0.41
SYVN1-208ENST00000527142 CALML3P27482 149 aa12.49□□□□□ -0.41
SYVN1-208ENST00000527142 ALDH5A1P51649 535 aaPredicted RBP12.49□□□□□ -0.41
SYVN1-208ENST00000527142 RCAN1P53805 252 aa12.49□□□□□ -0.41
SYVN1-208ENST00000527142 COL9A3Q14050 684 aaPredicted RBP12.49□□□□□ -0.41
SYVN1-208ENST00000527142 LRRC41Q15345 812 aa12.49□□□□□ -0.41
SYVN1-208ENST00000527142 SLC35G1Q2M3R5 365 aa12.49□□□□□ -0.41
SYVN1-208ENST00000527142 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
SYVN1-208ENST00000527142 SAMD3Q8N6K7 520 aa12.49□□□□□ -0.41
SYVN1-208ENST00000527142 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms