RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 TRIM43BA6NCK2 446 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 GRXCR1A8MXD5 290 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 TCP10L2B9ZVM9 353 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 U2SURPO15042 1029 aaKnown RBP7.87□□□□□ -1.15
CSTF3-207ENST00000526480 ZBTB39O15060 712 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 MSX1P28360 303 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 CCND3P30281 292 aaPredicted RBP7.87□□□□□ -1.15
CSTF3-207ENST00000526480 INPP5BP32019 993 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 EIF4A1P60842 406 aaKnown RBP7.87□□□□□ -1.15
CSTF3-207ENST00000526480 PTSQ03393 145 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 KCTD2Q14681 263 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 TRMT2AQ8IZ69 625 aaKnown RBP7.87□□□□□ -1.15
CSTF3-207ENST00000526480 TRIM43Q96BQ3 446 aaPredicted RBP7.87□□□□□ -1.15
CSTF3-207ENST00000526480 TDRD3Q9H7E2 651 aaKnown RBP7.87□□□□□ -1.15
CSTF3-207ENST00000526480 PRDM5Q9NQX1 630 aaPredicted RBP7.87□□□□□ -1.15
CSTF3-207ENST00000526480 PDLIM7Q9NR12 457 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 ZNF70Q9UC06 446 aaPredicted RBP7.87□□□□□ -1.15
CSTF3-207ENST00000526480 KCNH4Q9UQ05 1017 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 ATP11BQ9Y2G3 1177 aa7.87□□□□□ -1.15
CSTF3-207ENST00000526480 TGFBR3LH3BV60 316 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 ERC2O15083 957 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 NDUFB5O43674 189 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 MYO1BO43795 1136 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 FZD6O60353 706 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 PRKAR2BP31323 418 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 TMPOP42166 694 aaKnown RBP7.86□□□□□ -1.15
CSTF3-207ENST00000526480 AIMP1Q12904 312 aaKnown RBP7.86□□□□□ -1.15
CSTF3-207ENST00000526480 NPAS3Q8IXF0 933 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 PRSS33Q8NF86 280 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 SUSD3Q96L08 255 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 ASB16Q96NS5 453 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 PBX4Q9BYU1 374 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 COA1Q9GZY4 146 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 BSDC1Q9NW68 430 aaPredicted RBP7.86□□□□□ -1.15
CSTF3-207ENST00000526480 PRKAG2Q9UGJ0 569 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 GJD2Q9UKL4 321 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 BRPF3Q9ULD4 1205 aa7.86□□□□□ -1.15
CSTF3-207ENST00000526480 GCN1Q92616 2671 aaKnown RBP7.85□□□□□ -1.15
CSTF3-207ENST00000526480 IRS4O14654 1257 aaPredicted RBP7.85□□□□□ -1.15
CSTF3-207ENST00000526480 ZAP70P43403 619 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 CCT4P50991 539 aaKnown RBP7.85□□□□□ -1.15
CSTF3-207ENST00000526480 PPATQ06203 517 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 TAF7Q15545 349 aaPredicted RBP7.85□□□□□ -1.15
CSTF3-207ENST00000526480 HSP90AB3PQ58FF7 597 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 IER5Q5VY09 327 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 COPS6Q7L5N1 327 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 ATCAYQ86WG3 371 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 TREML1Q86YW5 311 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 XAGE3Q8WTP9 111 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 COA7Q96BR5 231 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 HSH2DQ96JZ2 352 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 RBCK1Q9BYM8 510 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 KCNH6Q9H252 994 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 JAG2Q9Y219 1238 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 DYRK1BQ9Y463 629 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 SMCHD1A6NHR9 2005 aa7.85□□□□□ -1.15
CSTF3-207ENST00000526480 GPR179Q6PRD1 2367 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.84□□□□□ -1.15
CSTF3-207ENST00000526480 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.84□□□□□ -1.15
CSTF3-207ENST00000526480 ANKRD33BA6NCL7 494 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 CACNB3P54284 484 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 CACNB2Q08289 660 aaPredicted RBP7.84□□□□□ -1.15
CSTF3-207ENST00000526480 SLFN5Q08AF3 891 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 AAMPQ13685 434 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 TNFAIP1Q13829 316 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 COL9A2Q14055 689 aaPredicted RBP7.84□□□□□ -1.15
CSTF3-207ENST00000526480 NFE2L2Q16236 605 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 AAK1Q2M2I8 961 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 ARSJQ5FYB0 599 aaPredicted RBP7.84□□□□□ -1.15
CSTF3-207ENST00000526480 DUSP27Q5VZP5 1158 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 ERMP1Q7Z2K6 904 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 NPAS4Q8IUM7 802 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 ZSCAN29Q8IWY8 852 aaPredicted RBP7.84□□□□□ -1.15
CSTF3-207ENST00000526480 RGL4Q8IZJ4 473 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 ANKRD13CQ8N6S4 541 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 ZNF280CQ8ND82 737 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 ISCA1Q9BUE6 129 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 PNNQ9H307 717 aaKnown RBP7.84□□□□□ -1.15
CSTF3-207ENST00000526480 CRISPLD1Q9H336 500 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 MAST4O15021 2626 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 FAM208BQ5VWN6 2430 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 SPTBN2O15020 2390 aa7.84□□□□□ -1.15
CSTF3-207ENST00000526480 MED19A0JLT2 244 aaPredicted RBP7.83□□□□□ -1.16
CSTF3-207ENST00000526480 PPFIA3O75145 1194 aa7.83□□□□□ -1.16
CSTF3-207ENST00000526480 RBM5P52756 815 aaKnown RBP eCLIP7.83□□□□□ -1.16
CSTF3-207ENST00000526480 TRIM60Q495X7 471 aa7.83□□□□□ -1.16
CSTF3-207ENST00000526480 WDR63Q8IWG1 891 aa7.83□□□□□ -1.16
CSTF3-207ENST00000526480 CITED4Q96RK1 184 aa7.83□□□□□ -1.16
CSTF3-207ENST00000526480 GPAMQ9HCL2 828 aa7.83□□□□□ -1.16
CSTF3-207ENST00000526480 FAM86C1Q9NVL1 165 aa7.83□□□□□ -1.16
CSTF3-207ENST00000526480 DMGDHQ9UI17 866 aaKnown RBP7.83□□□□□ -1.16
CSTF3-207ENST00000526480 MINPP1Q9UNW1 487 aa7.83□□□□□ -1.16
CSTF3-207ENST00000526480 A0A1W2PNR3 127 aa7.82□□□□□ -1.16
CSTF3-207ENST00000526480 MICAL2O94851 1124 aa7.82□□□□□ -1.16
CSTF3-207ENST00000526480 F11P03951 625 aa7.82□□□□□ -1.16
CSTF3-207ENST00000526480 CYP2B6P20813 491 aa7.82□□□□□ -1.16
CSTF3-207ENST00000526480 MZF1P28698 734 aaPredicted RBP7.82□□□□□ -1.16
CSTF3-207ENST00000526480 KRT40Q6A162 431 aa7.82□□□□□ -1.16
CSTF3-207ENST00000526480 LRRC69Q6ZNQ3 347 aa7.82□□□□□ -1.16
CSTF3-207ENST00000526480 HFE2Q6ZVN8 426 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms