RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 LSG1Q9H089 658 aaKnown RBP15.73■□□□□ 0.11
USH1C-203ENST00000526181 PRO3102Q9H379 93 aa15.73■□□□□ 0.11
USH1C-203ENST00000526181 SENP2Q9HC62 589 aa15.73■□□□□ 0.11
USH1C-203ENST00000526181 SYNRGQ9UMZ2 1314 aa15.72■□□□□ 0.11
USH1C-203ENST00000526181 LRRC37A2A6NM11 1700 aa15.72■□□□□ 0.11
USH1C-203ENST00000526181 ADAMTS4O75173 837 aa15.72■□□□□ 0.11
USH1C-203ENST00000526181 BAATQ14032 418 aaPredicted RBP15.72■□□□□ 0.11
USH1C-203ENST00000526181 CDC37Q16543 378 aaPredicted RBP15.72■□□□□ 0.11
USH1C-203ENST00000526181 USH1GQ495M9 461 aa15.72■□□□□ 0.11
USH1C-203ENST00000526181 BMP2KLQ5H9B9 411 aa15.72■□□□□ 0.11
USH1C-203ENST00000526181 ADGRF4Q8IZF3 695 aa15.72■□□□□ 0.11
USH1C-203ENST00000526181 FAM184BQ9ULE4 1060 aa15.72■□□□□ 0.11
USH1C-203ENST00000526181 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.71■□□□□ 0.11
USH1C-203ENST00000526181 PTPDC1A2A3K4 754 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 MYADML2A6NDP7 307 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 SLC34A2O95436 690 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 PARP1P09874 1014 aaKnown RBP15.71■□□□□ 0.11
USH1C-203ENST00000526181 PTGS1P23219 599 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 ANTXR2P58335 489 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 COL9A3Q14050 684 aaPredicted RBP15.71■□□□□ 0.11
USH1C-203ENST00000526181 CCDC144BQ3MJ40 725 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 ASPRV1Q53RT3 343 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 RALYLQ86SE5 291 aaKnown RBP15.71■□□□□ 0.11
USH1C-203ENST00000526181 STAG2Q8N3U4 1231 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 NCOA7Q8NI08 942 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 ABHD16BQ9H3Z7 469 aa15.71■□□□□ 0.11
USH1C-203ENST00000526181 WDR19Q8NEZ3 1342 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 LCTP09848 1927 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 IFIT3O14879 490 aaKnown RBP15.7■□□□□ 0.1
USH1C-203ENST00000526181 CALML3P27482 149 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 RTP1P59025 263 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 SLC39A5Q6ZMH5 540 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 KIAA1211Q6ZU35 1233 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 EEPD1Q7L9B9 569 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 RNF180Q86T96 592 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 MB21D2Q8IYB1 491 aaPredicted RBP15.7■□□□□ 0.1
USH1C-203ENST00000526181 CCDC136Q96JN2 1154 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 JMJD4Q9H9V9 463 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 VAT1LQ9HCJ6 419 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 PHF24Q9UPV7 400 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 ATP11BQ9Y2G3 1177 aa15.7■□□□□ 0.1
USH1C-203ENST00000526181 ASB14A6NK59 587 aa15.69■□□□□ 0.1
USH1C-203ENST00000526181 DHX16O60231 1041 aaKnown RBP15.69■□□□□ 0.1
USH1C-203ENST00000526181 FXR1P51114 621 aaKnown RBP eCLIP15.69■□□□□ 0.1
USH1C-203ENST00000526181 QRICH1Q2TAL8 776 aa15.69■□□□□ 0.1
USH1C-203ENST00000526181 TRIM60Q495X7 471 aa15.69■□□□□ 0.1
USH1C-203ENST00000526181 TMEM63BQ5T3F8 832 aa15.69■□□□□ 0.1
USH1C-203ENST00000526181 RNF207Q6ZRF8 634 aa15.69■□□□□ 0.1
USH1C-203ENST00000526181 FBXO16Q8IX29 292 aaPredicted RBP15.69■□□□□ 0.1
USH1C-203ENST00000526181 GDF15Q99988 308 aa15.69■□□□□ 0.1
USH1C-203ENST00000526181 ANO2Q9NQ90 1003 aa15.69■□□□□ 0.1
USH1C-203ENST00000526181 GPHNQ9NQX3 736 aaPredicted RBP15.69■□□□□ 0.1
USH1C-203ENST00000526181 PDGFCQ9NRA1 345 aa15.69■□□□□ 0.1
USH1C-203ENST00000526181 MAD2L2Q9UI95 211 aa15.69■□□□□ 0.1
USH1C-203ENST00000526181 A0A1W2PQ45 241 aaPredicted RBP15.68■□□□□ 0.1
USH1C-203ENST00000526181 A0A1W2PQY0 241 aa15.68■□□□□ 0.1
USH1C-203ENST00000526181 SLC27A2O14975 620 aa15.68■□□□□ 0.1
USH1C-203ENST00000526181 DUSP11O75319 330 aaKnown RBP15.68■□□□□ 0.1
USH1C-203ENST00000526181 MAGEA10P43363 369 aaPredicted RBP15.68■□□□□ 0.1
USH1C-203ENST00000526181 ALDH5A1P51649 535 aaPredicted RBP15.68■□□□□ 0.1
USH1C-203ENST00000526181 RPS6P62753 249 aaKnown RBP15.68■□□□□ 0.1
USH1C-203ENST00000526181 WTAPQ15007 396 aa15.68■□□□□ 0.1
USH1C-203ENST00000526181 SLC35G1Q2M3R5 365 aa15.68■□□□□ 0.1
USH1C-203ENST00000526181 CCSAPQ6IQ19 270 aaPredicted RBP15.68■□□□□ 0.1
USH1C-203ENST00000526181 ERICH2A1L162 156 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 PALM3A6NDB9 673 aaPredicted RBP15.67■□□□□ 0.1
USH1C-203ENST00000526181 KLRF2D3W0D1 207 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 C6orf222P0C671 652 aaPredicted RBP15.67■□□□□ 0.1
USH1C-203ENST00000526181 ACLYP53396 1101 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 GRM4Q14833 912 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 SNX17Q15036 470 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 NECTIN1Q15223 517 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 KCNA10Q16322 511 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 TMEM67Q5HYA8 995 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 TAPT1Q6NXT6 567 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 KLHDC9Q8NEP7 349 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 IGDCC4Q8TDY8 1250 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 MORC4Q8TE76 937 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 TBC1D5Q92609 795 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 UPF3AQ9H1J1 476 aaKnown RBP15.67■□□□□ 0.1
USH1C-203ENST00000526181 PNMA2Q9UL42 364 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 ABCB11O95342 1321 aa15.67■□□□□ 0.1
USH1C-203ENST00000526181 CTAGE5O15320 804 aa15.66■□□□□ 0.1
USH1C-203ENST00000526181 PPP1R11O60927 126 aaPredicted RBP15.66■□□□□ 0.1
USH1C-203ENST00000526181 SMPD1P17405 629 aa15.66■□□□□ 0.1
USH1C-203ENST00000526181 GJA9P57773 515 aa15.66■□□□□ 0.1
USH1C-203ENST00000526181 MDM2Q00987 491 aaPredicted RBP15.66■□□□□ 0.1
USH1C-203ENST00000526181 TNFAIP2Q03169 654 aa15.66■□□□□ 0.1
USH1C-203ENST00000526181 TROAPQ12815 778 aa15.66■□□□□ 0.1
USH1C-203ENST00000526181 CREB3L3Q68CJ9 461 aa15.66■□□□□ 0.1
USH1C-203ENST00000526181 NOL8Q76FK4 1167 aaKnown RBP15.66■□□□□ 0.1
USH1C-203ENST00000526181 MYL10Q9BUA6 226 aa15.66■□□□□ 0.1
USH1C-203ENST00000526181 ADD3Q9UEY8 706 aaKnown RBP15.66■□□□□ 0.1
USH1C-203ENST00000526181 PRC1O43663 620 aa15.65■□□□□ 0.1
USH1C-203ENST00000526181 CDC45O75419 566 aa15.65■□□□□ 0.1
USH1C-203ENST00000526181 ASGR1P07306 291 aa15.65■□□□□ 0.1
USH1C-203ENST00000526181 CST5P28325 142 aaPredicted RBP15.65■□□□□ 0.1
USH1C-203ENST00000526181 BEX3Q00994 111 aa15.65■□□□□ 0.1
USH1C-203ENST00000526181 SART3Q15020 963 aaKnown RBP15.65■□□□□ 0.1
USH1C-203ENST00000526181 SH3RF1Q7Z6J0 888 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms