RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CLEC4DQ8WXI8 215 aa20.06■□□□□ 0.8
LMX1B-203ENST00000526117 TCEANC2Q96MN5 208 aa20.06■□□□□ 0.8
LMX1B-203ENST00000526117 MYL10Q9BUA6 226 aa20.06■□□□□ 0.8
LMX1B-203ENST00000526117 ALDH8A1Q9H2A2 487 aaPredicted RBP20.06■□□□□ 0.8
LMX1B-203ENST00000526117 PAK6Q9NQU5 681 aaPredicted RBP20.06■□□□□ 0.8
LMX1B-203ENST00000526117 HOMER2Q9NSB8 354 aa20.06■□□□□ 0.8
LMX1B-203ENST00000526117 FLRT1Q9NZU1 646 aa20.06■□□□□ 0.8
LMX1B-203ENST00000526117 BIN2Q9UBW5 565 aaPredicted RBP20.06■□□□□ 0.8
LMX1B-203ENST00000526117 BRCA2P51587 3418 aa20.06■□□□□ 0.8
LMX1B-203ENST00000526117 LOC102724159A0A0B4J2E5 919 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 ZBTB43O43298 467 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 SEC24BO95487 1268 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 GHRHRQ02643 423 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 PWP2Q15269 919 aaKnown RBP20.05■□□□□ 0.8
LMX1B-203ENST00000526117 MUM1L1Q5H9M0 696 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 FBXO11Q86XK2 927 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 SAMD3Q8N6K7 520 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 FAM133AQ8N9E0 248 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 DDX11Q96FC9 970 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 AMNQ9BXJ7 453 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 CYP39A1Q9NYL5 469 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 BRPF3Q9ULD4 1205 aa20.05■□□□□ 0.8
LMX1B-203ENST00000526117 SYNGAP1Q96PV0 1343 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 PNMA6FA0A0J9YX94 578 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 DHX16O60231 1041 aaKnown RBP20.04■□□□□ 0.8
LMX1B-203ENST00000526117 GJB1P08034 283 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 CCL5P13501 91 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 CPA1P15085 419 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 FGD1P98174 961 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 CACNB2Q08289 660 aaPredicted RBP20.04■□□□□ 0.8
LMX1B-203ENST00000526117 MTFR1Q15390 333 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 TMTC3Q6ZXV5 915 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 MICU3Q86XE3 530 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 TMEM106CQ9BVX2 250 aa20.04■□□□□ 0.8
LMX1B-203ENST00000526117 KLF18A0A0U1RQI7 1052 aa20.03■□□□□ 0.8
LMX1B-203ENST00000526117 PGK2P07205 417 aa20.03■□□□□ 0.8
LMX1B-203ENST00000526117 PRKAR2AP13861 404 aaKnown RBP20.03■□□□□ 0.8
LMX1B-203ENST00000526117 SLC4A3P48751 1232 aa20.03■□□□□ 0.8
LMX1B-203ENST00000526117 BRF1Q92994 677 aa20.03■□□□□ 0.8
LMX1B-203ENST00000526117 FGD4Q96M96 766 aa20.03■□□□□ 0.8
LMX1B-203ENST00000526117 TINF2Q9BSI4 451 aa20.03■□□□□ 0.8
LMX1B-203ENST00000526117 HMX1Q9NP08 348 aaPredicted RBP20.03■□□□□ 0.8
LMX1B-203ENST00000526117 MAP3K20Q9NYL2 800 aaKnown RBP20.03■□□□□ 0.8
LMX1B-203ENST00000526117 MRPL11Q9Y3B7 192 aaKnown RBP20.03■□□□□ 0.8
LMX1B-203ENST00000526117 CCDC196A0A1B0GTZ2 297 aa20.02■□□□□ 0.8
LMX1B-203ENST00000526117 NFIBO00712 420 aa20.02■□□□□ 0.8
LMX1B-203ENST00000526117 PPP1R11O60927 126 aaPredicted RBP20.02■□□□□ 0.8
LMX1B-203ENST00000526117 CYBAP13498 195 aa20.02■□□□□ 0.8
LMX1B-203ENST00000526117 RGS19P49795 217 aa20.02■□□□□ 0.8
LMX1B-203ENST00000526117 TOB2Q14106 344 aaPredicted RBP20.02■□□□□ 0.8
LMX1B-203ENST00000526117 SRBD1Q8N5C6 995 aaKnown RBP20.02■□□□□ 0.8
LMX1B-203ENST00000526117 PIGSQ96S52 555 aa20.02■□□□□ 0.8
LMX1B-203ENST00000526117 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.02■□□□□ 0.8
LMX1B-203ENST00000526117 RNF208Q9H0X6 261 aa20.02■□□□□ 0.8
LMX1B-203ENST00000526117 UNC93B1Q9H1C4 597 aa20.02■□□□□ 0.8
LMX1B-203ENST00000526117 VAT1LQ9HCJ6 419 aa20.02■□□□□ 0.8
LMX1B-203ENST00000526117 MYH6P13533 1939 aa20.02■□□□□ 0.79
LMX1B-203ENST00000526117 POTEB2H3BUK9 544 aa20.01■□□□□ 0.79
LMX1B-203ENST00000526117 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
LMX1B-203ENST00000526117 GJA8P48165 433 aa20.01■□□□□ 0.79
LMX1B-203ENST00000526117 FUT2Q10981 343 aa20.01■□□□□ 0.79
LMX1B-203ENST00000526117 TRIM32Q13049 653 aa20.01■□□□□ 0.79
LMX1B-203ENST00000526117 RTN1Q16799 776 aa20.01■□□□□ 0.79
LMX1B-203ENST00000526117 MCF2L2Q86YR7 1114 aa20.01■□□□□ 0.79
LMX1B-203ENST00000526117 RRP36Q96EU6 259 aaKnown RBP20.01■□□□□ 0.79
LMX1B-203ENST00000526117 SMCHD1A6NHR9 2005 aa20.01■□□□□ 0.79
LMX1B-203ENST00000526117 LCTP09848 1927 aa20.01■□□□□ 0.79
LMX1B-203ENST00000526117 GOLGA8AA7E2F4 631 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 GOLGA8BA8MQT2 603 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 MSCO60682 206 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 RXRAP19793 462 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 CYP2C19P33261 490 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 APOBRQ0VD83 1088 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 USH1GQ495M9 461 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 TEX2Q8IWB9 1127 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 DNERQ8NFT8 737 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 MORC4Q8TE76 937 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 ZNF274Q96GC6 653 aaPredicted RBP20■□□□□ 0.79
LMX1B-203ENST00000526117 UPF3BQ9BZI7 483 aaKnown RBP20■□□□□ 0.79
LMX1B-203ENST00000526117 CRISPLD2Q9H0B8 497 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 FAM217BQ9NTX9 383 aaPredicted RBP20■□□□□ 0.79
LMX1B-203ENST00000526117 PCDHA1Q9Y5I3 950 aa20■□□□□ 0.79
LMX1B-203ENST00000526117 ASB14A6NK59 587 aa19.99■□□□□ 0.79
LMX1B-203ENST00000526117 TAL1P17542 331 aaPredicted RBP19.99■□□□□ 0.79
LMX1B-203ENST00000526117 METAP2P50579 478 aaKnown RBP eCLIP19.99■□□□□ 0.79
LMX1B-203ENST00000526117 BAATQ14032 418 aaPredicted RBP19.99■□□□□ 0.79
LMX1B-203ENST00000526117 NSMFQ6X4W1 530 aa19.99■□□□□ 0.79
LMX1B-203ENST00000526117 RNF207Q6ZRF8 634 aa19.99■□□□□ 0.79
LMX1B-203ENST00000526117 IL27Q8NEV9 243 aa19.99■□□□□ 0.79
LMX1B-203ENST00000526117 PDRG1Q9NUG6 133 aa19.99■□□□□ 0.79
LMX1B-203ENST00000526117 ADD3Q9UEY8 706 aaKnown RBP19.99■□□□□ 0.79
LMX1B-203ENST00000526117 SEC63Q9UGP8 760 aaKnown RBP19.99■□□□□ 0.79
LMX1B-203ENST00000526117 CNTNAP5Q8WYK1 1306 aa19.99■□□□□ 0.79
LMX1B-203ENST00000526117 POTEFA5A3E0 1075 aa19.98■□□□□ 0.79
LMX1B-203ENST00000526117 SOWAHBA6NEL2 793 aa19.98■□□□□ 0.79
LMX1B-203ENST00000526117 OPLAHO14841 1288 aa19.98■□□□□ 0.79
LMX1B-203ENST00000526117 SGPL1O95470 568 aa19.98■□□□□ 0.79
LMX1B-203ENST00000526117 PDIA3P30101 505 aaKnown RBP19.98■□□□□ 0.79
LMX1B-203ENST00000526117 RBM25P49756 843 aaKnown RBP19.98■□□□□ 0.79
LMX1B-203ENST00000526117 HSD17B4P51659 736 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms