RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 CNPY2Q9Y2B0 182 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 TRIM43BA6NCK2 446 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 B4E1Z4 1266 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 KBTBD13C9JR72 458 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 KDM4AO75164 1064 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 ICAM1P05362 532 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 PTGS1P23219 599 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 PTH1RQ03431 593 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 CCDC96Q2M329 555 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 CCDC144BQ3MJ40 725 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 TRIM60Q495X7 471 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 C1orf53Q5VUE5 145 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 CLEC4DQ8WXI8 215 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 TRIM43Q96BQ3 446 aaPredicted RBP14.74□□□□□ -0.05
SMCO4-202ENST00000525141 UBA5Q9GZZ9 404 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 CPVLQ9H3G5 476 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 ABHD16BQ9H3Z7 469 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 RNF41Q9H4P4 317 aaPredicted RBP14.74□□□□□ -0.05
SMCO4-202ENST00000525141 ATP11BQ9Y2G3 1177 aa14.74□□□□□ -0.05
SMCO4-202ENST00000525141 RAD50Q92878 1312 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.73□□□□□ -0.05
SMCO4-202ENST00000525141 DUSP11O75319 330 aaKnown RBP14.73□□□□□ -0.05
SMCO4-202ENST00000525141 GOLGA8HP0CJ92 632 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 ITGB8P26012 769 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 NKX3-2P78367 333 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 TLE2Q04725 743 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 KCNA10Q16322 511 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 TAPT1Q6NXT6 567 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 ESR2Q92731 530 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 PDGFCQ9NRA1 345 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 ZHX1Q9UKY1 873 aaPredicted RBP14.73□□□□□ -0.05
SMCO4-202ENST00000525141 CCPG1Q9ULG6 757 aa14.73□□□□□ -0.05
SMCO4-202ENST00000525141 SYNRGQ9UMZ2 1314 aa14.72□□□□□ -0.05
SMCO4-202ENST00000525141 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
SMCO4-202ENST00000525141 ACLYP53396 1101 aa14.72□□□□□ -0.05
SMCO4-202ENST00000525141 GJA9P57773 515 aa14.72□□□□□ -0.05
SMCO4-202ENST00000525141 BAATQ14032 418 aaPredicted RBP14.72□□□□□ -0.05
SMCO4-202ENST00000525141 CYB5R4Q7L1T6 521 aa14.72□□□□□ -0.05
SMCO4-202ENST00000525141 RNF180Q86T96 592 aa14.72□□□□□ -0.05
SMCO4-202ENST00000525141 MORC4Q8TE76 937 aa14.72□□□□□ -0.05
SMCO4-202ENST00000525141 TBC1D5Q92609 795 aa14.72□□□□□ -0.05
SMCO4-202ENST00000525141 ZSCAN10Q96SZ4 725 aaPredicted RBP14.72□□□□□ -0.05
SMCO4-202ENST00000525141 TSEN34Q9BSV6 310 aaKnown RBP14.72□□□□□ -0.05
SMCO4-202ENST00000525141 UBE2OQ9C0C9 1292 aaKnown RBP14.72□□□□□ -0.05
SMCO4-202ENST00000525141 UPF3AQ9H1J1 476 aaKnown RBP14.72□□□□□ -0.05
SMCO4-202ENST00000525141 TAF6LQ9Y6J9 622 aa14.72□□□□□ -0.05
SMCO4-202ENST00000525141 LCTP09848 1927 aa14.71□□□□□ -0.05
SMCO4-202ENST00000525141 A0A1W2PQ45 241 aaPredicted RBP14.71□□□□□ -0.05
SMCO4-202ENST00000525141 A0A1W2PQY0 241 aa14.71□□□□□ -0.05
SMCO4-202ENST00000525141 NFIBO00712 420 aa14.71□□□□□ -0.05
SMCO4-202ENST00000525141 SGSM2O43147 1006 aa14.71□□□□□ -0.05
SMCO4-202ENST00000525141 CDK7P50613 346 aa14.71□□□□□ -0.05
SMCO4-202ENST00000525141 LRIT3Q3SXY7 679 aa14.71□□□□□ -0.05
SMCO4-202ENST00000525141 ENAHQ8N8S7 591 aaPredicted RBP14.71□□□□□ -0.05
SMCO4-202ENST00000525141 PDLIM7Q9NR12 457 aa14.71□□□□□ -0.05
SMCO4-202ENST00000525141 CTNNA3Q9UI47 895 aa14.71□□□□□ -0.05
SMCO4-202ENST00000525141 GNEQ9Y223 722 aaKnown RBP14.71□□□□□ -0.05
SMCO4-202ENST00000525141 LAMA3Q16787 3333 aa14.71□□□□□ -0.05
SMCO4-202ENST00000525141 SMPD1P17405 629 aa14.7□□□□□ -0.06
SMCO4-202ENST00000525141 CST5P28325 142 aaPredicted RBP14.7□□□□□ -0.06
SMCO4-202ENST00000525141 SEC23AQ15436 765 aa14.7□□□□□ -0.06
SMCO4-202ENST00000525141 IMMTQ16891 758 aaKnown RBP14.7□□□□□ -0.06
SMCO4-202ENST00000525141 NSMFQ6X4W1 530 aa14.7□□□□□ -0.06
SMCO4-202ENST00000525141 TDHQ8IZJ6 230 aa14.7□□□□□ -0.06
SMCO4-202ENST00000525141 PNMA1Q8ND90 353 aa14.7□□□□□ -0.06
SMCO4-202ENST00000525141 ASB14A6NK59 587 aa14.69□□□□□ -0.06
SMCO4-202ENST00000525141 CYP21A2P08686 494 aa14.69□□□□□ -0.06
SMCO4-202ENST00000525141 BEX3Q00994 111 aa14.69□□□□□ -0.06
SMCO4-202ENST00000525141 TNFAIP2Q03169 654 aa14.69□□□□□ -0.06
SMCO4-202ENST00000525141 FAAP100Q0VG06 881 aa14.69□□□□□ -0.06
SMCO4-202ENST00000525141 EEPD1Q7L9B9 569 aa14.69□□□□□ -0.06
SMCO4-202ENST00000525141 BADQ92934 168 aa14.69□□□□□ -0.06
SMCO4-202ENST00000525141 SENP2Q9HC62 589 aa14.69□□□□□ -0.06
SMCO4-202ENST00000525141 ASGR1P07306 291 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 C6orf222P0C671 652 aaPredicted RBP14.68□□□□□ -0.06
SMCO4-202ENST00000525141 NT5C2P49902 561 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 SLC35G1Q2M3R5 365 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 CCDC178Q5BJE1 867 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 GNASQ5JWF2 1037 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 IQSEC1Q6DN90 963 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 CASC1Q6TDU7 716 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 ANKRD33Q7Z3H0 272 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 IQCA1Q86XH1 822 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 ADGRF4Q8IZF3 695 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 STAG2Q8N3U4 1231 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 ESYT1Q9BSJ8 1104 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 KRT23Q9C075 422 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 LAMA4Q16363 1823 aa14.68□□□□□ -0.06
SMCO4-202ENST00000525141 GRIN2DO15399 1336 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 TNKSO95271 1327 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 RBM47A0AV96 593 aaKnown RBP14.67□□□□□ -0.06
SMCO4-202ENST00000525141 MOXD2PA6NHM9 499 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 KIAA0355O15063 1070 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 DYNC1LI2O43237 492 aaPredicted RBP14.67□□□□□ -0.06
SMCO4-202ENST00000525141 CDC45O75419 566 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 ALDH5A1P51649 535 aaPredicted RBP14.67□□□□□ -0.06
SMCO4-202ENST00000525141 EPHB4P54760 987 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 RPS6P62753 249 aaKnown RBP14.67□□□□□ -0.06
SMCO4-202ENST00000525141 SHHQ15465 462 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms