RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ADCY7P51828 1080 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 FOXD4L5Q5VV16 416 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 GALNT17Q6IS24 598 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 IFNL1Q8IU54 200 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 DIS3L2Q8IYB7 885 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 FOXD4L4Q8WXT5 416 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 ZMYND12Q9H0C1 365 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 ZNF214Q9UL59 606 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 MRPL11Q9Y3B7 192 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 AOC2O75106 756 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 STAT3P40763 770 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 FERMT3Q86UX7 667 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 BICD2Q8TD16 824 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 CUL5Q93034 780 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 ZIC5Q96T25 663 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 GLT8D2Q9H1C3 349 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 HOMER2Q9NSB8 354 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 BTBD7Q9P203 1132 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 PCDHA4Q9UN74 947 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 RABGAP1Q9Y3P9 1069 aa18.19■□□□□ 0.5
TSPAN4-213ENST00000524895 F13A1P00488 732 aa18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 TM4SF4P48230 202 aa18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 GCLCP48506 637 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 MRPL12P52815 198 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 HTRA3P83110 453 aa18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 TAF1CQ15572 869 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 REM2Q8IYK8 340 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 BLIDQ8IZY5 108 aa18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 DAGLBQ8NCG7 672 aa18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 SPATC1LQ9H0A9 340 aa18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 PSTPIP2Q9H939 334 aa18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 RIC8AQ9NPQ8 531 aa18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
TSPAN4-213ENST00000524895 RBBP6Q7Z6E9 1792 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 BTBD18B2RXH4 712 aa18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 CNMDO75829 334 aa18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 NPY5RQ15761 445 aa18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 TKFCQ3LXA3 575 aa18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 POTEEQ6S8J3 1075 aa18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 REXO1Q8N1G1 1221 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 TRERF1Q96PN7 1200 aa18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 FOXP1Q9H334 677 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 RNF146Q9NTX7 359 aa18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 RBPJLQ9UBG7 517 aa18.17■□□□□ 0.5
TSPAN4-213ENST00000524895 KIF28PB7ZC32 967 aa18.16■□□□□ 0.5
TSPAN4-213ENST00000524895 PEX10O60683 326 aa18.16■□□□□ 0.5
TSPAN4-213ENST00000524895 COPB2P35606 906 aa18.16■□□□□ 0.5
TSPAN4-213ENST00000524895 RESTQ13127 1097 aa18.16■□□□□ 0.5
TSPAN4-213ENST00000524895 NR5A1Q13285 461 aa18.16■□□□□ 0.5
TSPAN4-213ENST00000524895 RIOX2Q8IUF8 465 aa18.16■□□□□ 0.5
TSPAN4-213ENST00000524895 OXER1Q8TDS5 423 aa18.16■□□□□ 0.5
TSPAN4-213ENST00000524895 ZSCAN16Q9H4T2 348 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-213ENST00000524895 TXNRD2Q9NNW7 524 aa18.16■□□□□ 0.5
TSPAN4-213ENST00000524895 NFIBO00712 420 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 OPLAHO14841 1288 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 ALDH1A1P00352 501 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 U2AF2P26368 475 aaKnown RBP eCLIP18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 VEGFBP49765 207 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 ERVK-9P63128 1117 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 ERVK-24P63145 666 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 UBE2SQ16763 222 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 MCF2L2Q86YR7 1114 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 NOSTRINQ8IVI9 506 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 TEX2Q8IWB9 1127 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 ANKRD13CQ8N6S4 541 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 GPRC5AQ8NFJ5 357 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 ACAD9Q9H845 621 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 ZFYVE28Q9HCC9 887 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 RIPK3Q9Y572 518 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 THSD7BQ9C0I4 1608 aa18.15■□□□□ 0.5
TSPAN4-213ENST00000524895 GCOM1H8Y6P7 765 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 SLC25A27O95847 323 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 CFBP00751 764 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 POLR2MP0CAP2 368 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 HSPA6P17066 643 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 MAP2K2P36507 400 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 C1QTNF8P60827 252 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 CCNA1P78396 465 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 MUM1L1Q5H9M0 696 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 NCAPG2Q86XI2 1143 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 CHST13Q8NET6 341 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 RASGRP4Q8TDF6 673 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 CLEC4DQ8WXI8 215 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 MOV10L1Q9BXT6 1211 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 MORF4L1Q9UBU8 362 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 BIN2Q9UBW5 565 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 FBXO40Q9UH90 709 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 PCDHA6Q9UN73 950 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 PCDHA8Q9Y5H6 950 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 ATP6V1DQ9Y5K8 247 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 ADGRA2Q96PE1 1338 aa18.14■□□□□ 0.49
TSPAN4-213ENST00000524895 CCDC194A0A1B0GVG4 234 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 PIK3CDO00329 1044 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 ADAMTS3O15072 1205 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 FAM110CQ1W6H9 321 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 JAKMIP3Q5VZ66 844 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 MCTP2Q6DN12 878 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 USP17L6PQ6QN14 398 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 NSMFQ6X4W1 530 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms