RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 CYBAP13498 195 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 RPS6KB1P23443 525 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 SMARCA1P28370 1054 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 CCND3P30281 292 aaPredicted RBP13.93□□□□□ -0.18
CLN8-207ENST00000524258 SLC4A3P48751 1232 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 MNX1P50219 401 aaPredicted RBP13.93□□□□□ -0.18
CLN8-207ENST00000524258 EVCP57679 992 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 FUT2Q10981 343 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 LHX8Q68G74 356 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 APOA5Q6Q788 366 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 ZNF467Q7Z7K2 595 aaPredicted RBP13.93□□□□□ -0.18
CLN8-207ENST00000524258 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
CLN8-207ENST00000524258 TBC1D5Q92609 795 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.93□□□□□ -0.18
CLN8-207ENST00000524258 VAT1LQ9HCJ6 419 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 BAZ2BQ9UIF8 2168 aaKnown RBP13.93□□□□□ -0.18
CLN8-207ENST00000524258 RBBP6Q7Z6E9 1792 aaKnown RBP13.93□□□□□ -0.18
CLN8-207ENST00000524258 TNRC18O15417 2968 aaPredicted RBP13.92□□□□□ -0.18
CLN8-207ENST00000524258 ZBTB5O15062 677 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 PLEKHA8P1O95397 391 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 SGPL1O95470 568 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 RXRAP19793 462 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 GHRHRQ02643 423 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 PRAMEF19Q5SWL8 479 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 MFSD14CQ5VZR4 134 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 RAB11FIP4Q86YS3 637 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 ANKRD35Q8N283 1001 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 FANCBQ8NB91 859 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 U2AF1L4Q8WU68 220 aaKnown RBP13.92□□□□□ -0.18
CLN8-207ENST00000524258 PURBQ96QR8 312 aaKnown RBP13.92□□□□□ -0.18
CLN8-207ENST00000524258 TINF2Q9BSI4 451 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 SPZ1Q9BXG8 430 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 KATNBL1Q9H079 304 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 PNMA2Q9UL42 364 aa13.92□□□□□ -0.18
CLN8-207ENST00000524258 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 ZNF865P0CJ78 1059 aaPredicted RBP13.91□□□□□ -0.18
CLN8-207ENST00000524258 CASTP20810 708 aaKnown RBP13.91□□□□□ -0.18
CLN8-207ENST00000524258 BAATQ14032 418 aaPredicted RBP13.91□□□□□ -0.18
CLN8-207ENST00000524258 TOB2Q14106 344 aaPredicted RBP13.91□□□□□ -0.18
CLN8-207ENST00000524258 BLOC1S2Q6QNY1 142 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 Q6ZUG5 572 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 TMTC3Q6ZXV5 915 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 MSL3Q8N5Y2 521 aaKnown RBP13.91□□□□□ -0.18
CLN8-207ENST00000524258 MORC4Q8TE76 937 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 NUP133Q8WUM0 1156 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 DDX11Q96FC9 970 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 DEFB118Q96PH6 123 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 PIGSQ96S52 555 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 TMEM106CQ9BVX2 250 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 HMX1Q9NP08 348 aaPredicted RBP13.91□□□□□ -0.18
CLN8-207ENST00000524258 SLC5A4Q9NY91 659 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 SLC12A7Q9Y666 1083 aa13.91□□□□□ -0.18
CLN8-207ENST00000524258 PFASO15067 1338 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 LCTP09848 1927 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 CALM1P0DP23 149 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 CALM2P0DP24 149 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 CALM3P0DP25 149 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 PSMA5P28066 241 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 CDC27P30260 824 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 RCAN1P53805 252 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 ANAPC15P60006 121 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 SLC30A10Q6XR72 485 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 FBXO11Q86XK2 927 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 CMTR1Q8N1G2 835 aaKnown RBP13.9□□□□□ -0.18
CLN8-207ENST00000524258 MAF1Q9H063 256 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 NRBP1Q9UHY1 535 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 OGDHLQ9ULD0 1010 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 DDX49Q9Y6V7 483 aaKnown RBP13.9□□□□□ -0.18
CLN8-207ENST00000524258 NID2Q14112 1375 aa13.9□□□□□ -0.18
CLN8-207ENST00000524258 ABCB11O95342 1321 aa13.9□□□□□ -0.19
CLN8-207ENST00000524258 SYNGAP1Q96PV0 1343 aa13.9□□□□□ -0.19
CLN8-207ENST00000524258 PNMA6FA0A0J9YX94 578 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 KLF18A0A0U1RQI7 1052 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 KIF5BP33176 963 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 RPS6P62753 249 aaKnown RBP13.89□□□□□ -0.19
CLN8-207ENST00000524258 APOBRQ0VD83 1088 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 USH1GQ495M9 461 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 NSMFQ6X4W1 530 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 CCDC144CPQ8IYA2 1237 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 CTCFLQ8NI51 663 aaPredicted RBP13.89□□□□□ -0.19
CLN8-207ENST00000524258 BRF1Q92994 677 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 UPF3BQ9BZI7 483 aaKnown RBP13.89□□□□□ -0.19
CLN8-207ENST00000524258 COL20A1Q9P218 1284 aa13.89□□□□□ -0.19
CLN8-207ENST00000524258 EDNRBP24530 442 aa13.88□□□□□ -0.19
CLN8-207ENST00000524258 GNAQP50148 359 aa13.88□□□□□ -0.19
CLN8-207ENST00000524258 ARMCX2Q7L311 632 aa13.88□□□□□ -0.19
CLN8-207ENST00000524258 MICU3Q86XE3 530 aa13.88□□□□□ -0.19
CLN8-207ENST00000524258 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
CLN8-207ENST00000524258 ALDH8A1Q9H2A2 487 aaPredicted RBP13.88□□□□□ -0.19
CLN8-207ENST00000524258 PLXNA1Q9UIW2 1896 aa13.88□□□□□ -0.19
CLN8-207ENST00000524258 CNTNAP5Q8WYK1 1306 aa13.88□□□□□ -0.19
CLN8-207ENST00000524258 SEPT4O43236 478 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 ZBTB43O43298 467 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 ADCY6O43306 1168 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms