RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 TNIP3Q96KP6 325 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 C16orf45Q96MC5 204 aaPredicted RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 TUBA1CQ9BQE3 449 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 TRPV6Q9H1D0 765 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 BHMT2Q9H2M3 363 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 KCTD10Q9H3F6 313 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 VPS37BQ9H9H4 285 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 ZCCHC17Q9NP64 241 aaKnown RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 GPR108Q9NPR9 543 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 CD93Q9NPY3 652 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 ANO2Q9NQ90 1003 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 PICK1Q9NRD5 415 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 STRN4Q9NRL3 753 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 ATP8A2Q9NTI2 1148 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 PPP1R14DQ9NXH3 145 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 ZC3H7BQ9UGR2 993 aaKnown RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 DDX25Q9UHL0 483 aaKnown RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 ATPIF1Q9UII2 106 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 EPN1Q9Y6I3 576 aaPredicted RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 ROCK2O75116 1388 aaKnown RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.26□□□□□ -1.25
SDC2-208ENST00000523877 TMEM221A6NGB7 291 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 PIP5K1CO60331 668 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 DAB1O75553 588 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 ITGBL1O95965 494 aaPredicted RBP7.26□□□□□ -1.25
SDC2-208ENST00000523877 SCGB1D2O95969 90 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 U2AF2P26368 475 aaKnown RBP eCLIP7.26□□□□□ -1.25
SDC2-208ENST00000523877 KRT20P35900 424 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 POLD2P49005 469 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 EVCP57679 992 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 TBX2Q13207 712 aaPredicted RBP7.26□□□□□ -1.25
SDC2-208ENST00000523877 OASLQ15646 514 aaKnown RBP7.26□□□□□ -1.25
SDC2-208ENST00000523877 ADALQ6DHV7 355 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 CORO6Q6QEF8 472 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 CEP68Q76N32 757 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 PODNQ7Z5L7 613 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 CCDC83Q8IWF9 413 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 RTKN2Q8IZC4 609 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 OR52K2Q8NGK3 314 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 ADAMTS19Q8TE59 1207 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 SAMD11Q96NU1 681 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 OSBPL9Q96SU4 736 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 TRIM5Q9C035 493 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 NCOR1P1Q9H4R4 102 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 DNAAF2Q9NVR5 837 aaKnown RBP7.26□□□□□ -1.25
SDC2-208ENST00000523877 WDR35Q9P2L0 1181 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 RABGEF1Q9UJ41 708 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 STRIP2Q9ULQ0 834 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 INPP5FQ9Y2H2 1132 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 IPPQ9Y573 584 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 SNX8Q9Y5X2 465 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 SLC4A4Q9Y6R1 1079 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 SCAPERQ9BY12 1400 aa7.26□□□□□ -1.25
SDC2-208ENST00000523877 AATKQ6ZMQ8 1374 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 TSPY2A6NKD2 308 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 C9IYK1 514 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 CETN3O15182 167 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 ZBTB14O43829 449 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 ATP9BO43861 1147 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 KCNJ13O60928 360 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 SNX4O95219 450 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 SERPINC1P01008 464 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 CAPNS1P04632 268 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 TSPY3P0CV98 308 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 TSPY8P0CW00 308 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 ALOX15P16050 662 aaPredicted RBP7.25□□□□□ -1.25
SDC2-208ENST00000523877 NDUFV2P19404 249 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 CSTF2P33240 577 aaKnown RBP eCLIP7.25□□□□□ -1.25
SDC2-208ENST00000523877 MAGEA10P43363 369 aaPredicted RBP7.25□□□□□ -1.25
SDC2-208ENST00000523877 TSPY1Q01534 308 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 TRIM71Q2Q1W2 868 aaKnown RBP7.25□□□□□ -1.25
SDC2-208ENST00000523877 CREB3L3Q68CJ9 461 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 RCSD1Q6JBY9 416 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 NCCRP1Q6ZVX7 275 aaPredicted RBP7.25□□□□□ -1.25
SDC2-208ENST00000523877 VPS37DQ86XT2 251 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 CCDC170Q8IYT3 715 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 TMCO5AQ8N6Q1 288 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 GPT2Q8TD30 523 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 DPF3Q92784 378 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 ATP6V0A1Q93050 837 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 PPP2R3CQ969Q6 453 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 CLIP3Q96DZ5 547 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 COG3Q96JB2 828 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 BATF3Q9NR55 127 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 SMYD2Q9NRG4 433 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 METTL5Q9NRN9 209 aaKnown RBP7.25□□□□□ -1.25
SDC2-208ENST00000523877 HELLSQ9NRZ9 838 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 ZNF446Q9NWS9 450 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.25□□□□□ -1.25
SDC2-208ENST00000523877 MCM8Q9UJA3 840 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 GRID1Q9ULK0 1009 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 ZKSCAN5Q9Y2L8 839 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 GIT1Q9Y2X7 761 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 GMEB1Q9Y692 573 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 SNCAIPQ9Y6H5 919 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 WDR97A6NE52 1622 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 KDM6BO15054 1643 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 ABCC8Q09428 1581 aa7.25□□□□□ -1.25
SDC2-208ENST00000523877 CARMIL1Q5VZK9 1371 aa7.24□□□□□ -1.25
SDC2-208ENST00000523877 TOPBP1Q92547 1522 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms