RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 MYH6P13533 1939 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 SPDYE3A6NKU9 549 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 SPDYE16A6NNV3 312 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-212ENST00000523483 NCAPG2Q86XI2 1143 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 GZF1Q9H116 711 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-212ENST00000523483 FOXP1Q9H334 677 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-212ENST00000523483 CFAP45Q9UL16 551 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 CENPFP49454 3210 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 NFIBO00712 420 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 SPRYD7Q5W111 196 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 CYP4F22Q6NT55 531 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 RGMBQ6NW40 437 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 ZMYND12Q9H0C1 365 aa10.69□□□□□ -0.7
SDCBP-212ENST00000523483 NOL7Q9UMY1 257 aaKnown RBP10.69□□□□□ -0.7
SDCBP-212ENST00000523483 PDHXO00330 501 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 CETPP11597 493 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 DSG3P32926 999 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 GTF2A2P52657 109 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 BICD2Q8TD16 824 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 RANBP17Q9H2T7 1088 aaKnown RBP10.68□□□□□ -0.7
SDCBP-212ENST00000523483 SLC38A10Q9HBR0 1119 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 PCDHA6Q9UN73 950 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 AGTPBP1Q9UPW5 1226 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 RIPK3Q9Y572 518 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 PCDHB6Q9Y5E3 794 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 PCDHA8Q9Y5H6 950 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 MRVI1Q9Y6F6 885 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 TMEM88BA6NKF7 163 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 MARCH6O60337 910 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 HERVK_113P62684 666 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 NPY5RQ15761 445 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 TBCKQ8TEA7 893 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 BRI3BPQ8WY22 251 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 C12orf42Q96LP6 360 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 TRERF1Q96PN7 1200 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 SH3GLB2Q9NR46 395 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 RNF146Q9NTX7 359 aa10.68□□□□□ -0.7
SDCBP-212ENST00000523483 DDX49Q9Y6V7 483 aaKnown RBP10.68□□□□□ -0.7
SDCBP-212ENST00000523483 CCNT1O60563 726 aaKnown RBP10.67□□□□□ -0.7
SDCBP-212ENST00000523483 ICAM1P05362 532 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 STAT3P40763 770 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 PABPC4Q13310 644 aaKnown RBP eCLIP10.67□□□□□ -0.75e-7■■■□□ 16
SDCBP-212ENST00000523483 TMEM132BQ14DG7 1078 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 PROCA1Q8NCQ7 364 aaPredicted RBP10.67□□□□□ -0.7
SDCBP-212ENST00000523483 MRPL11Q9Y3B7 192 aaKnown RBP10.67□□□□□ -0.7
SDCBP-212ENST00000523483 BTBD19C9JJ37 291 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 GADD45BO75293 160 aaPredicted RBP10.67□□□□□ -0.7
SDCBP-212ENST00000523483 OSBPP22059 807 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 U2AF2P26368 475 aaKnown RBP eCLIP10.67□□□□□ -0.7
SDCBP-212ENST00000523483 NONOQ15233 471 aaKnown RBP eCLIP10.67□□□□□ -0.7
SDCBP-212ENST00000523483 MUM1L1Q5H9M0 696 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 FAM43AQ8N2R8 423 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 ANKRD13CQ8N6S4 541 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 MTMR8Q96EF0 704 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 KCNH4Q9UQ05 1017 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 SMCHD1A6NHR9 2005 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 DDX11L8A8MPP1 907 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 WNT7AO00755 349 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 ZRSR1Q15695 479 aaKnown RBP10.67□□□□□ -0.7
SDCBP-212ENST00000523483 RILPL1Q5EBL4 403 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 SH3D19Q5HYK7 790 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 ANO1Q5XXA6 986 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
SDCBP-212ENST00000523483 TEX13BQ9BXU2 312 aa10.67□□□□□ -0.7
SDCBP-212ENST00000523483 GCOM1H8Y6P7 765 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-212ENST00000523483 POLR2MP0CAP2 368 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 ZNF76P36508 570 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 SPECC1Q5M775 1068 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 TTC38Q5R3I4 469 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 LEO1Q8WVC0 666 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-212ENST00000523483 SCAND2PQ9GZW5 306 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-212ENST00000523483 RIC8AQ9NPQ8 531 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 hCG_1984214I3L0E3 225 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 ANKRD35Q8N283 1001 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 ZNF713Q8N859 430 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-212ENST00000523483 ZIC5Q96T25 663 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 ZNF536O15090 1300 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 TOB1P50616 345 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-212ENST00000523483 TRAF1Q13077 416 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 KRT25Q7Z3Z0 450 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 RASAL3Q86YV0 1011 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 BTBD7Q9P203 1132 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
SDCBP-212ENST00000523483 GALNT17Q6IS24 598 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 MS4A4AQ96JQ5 239 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 TXNRD2Q9NNW7 524 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 PKD2L1Q9P0L9 805 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 PNMA3Q9UL41 463 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 PASKQ96RG2 1323 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 SPTLC2O15270 562 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 ZBTB48P10074 688 aaPredicted RBP10.65□□□□□ -0.7
SDCBP-212ENST00000523483 CSPP1Q1MSJ5 1256 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 RNF207Q6ZRF8 634 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 ANO3Q9BYT9 981 aa10.65□□□□□ -0.7
SDCBP-212ENST00000523483 ZNF214Q9UL59 606 aaPredicted RBP10.65□□□□□ -0.7
SDCBP-212ENST00000523483 MEIS2O14770 477 aa10.65□□□□□ -0.71
SDCBP-212ENST00000523483 MYCLP12524 364 aaPredicted RBP10.65□□□□□ -0.71
SDCBP-212ENST00000523483 EIF2AK2P19525 551 aaKnown RBP10.65□□□□□ -0.71
SDCBP-212ENST00000523483 RPS6P62753 249 aaKnown RBP10.65□□□□□ -0.71
SDCBP-212ENST00000523483 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms