RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 RIOX2Q8IUF8 465 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 TEX2Q8IWB9 1127 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 GPRC5AQ8NFJ5 357 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 ZMYND12Q9H0C1 365 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 TXNRD2Q9NNW7 524 aa29.54■■■□□ 2.32
NKX2-1-204ENST00000522719 H3BQV1 296 aa29.53■■■□□ 2.32
NKX2-1-204ENST00000522719 TLR2O60603 784 aa29.53■■■□□ 2.32
NKX2-1-204ENST00000522719 CALML3P27482 149 aa29.53■■■□□ 2.32
NKX2-1-204ENST00000522719 ERVK-9P63128 1117 aa29.53■■■□□ 2.32
NKX2-1-204ENST00000522719 ERVK-24P63145 666 aa29.53■■■□□ 2.32
NKX2-1-204ENST00000522719 FAM110CQ1W6H9 321 aa29.53■■■□□ 2.32
NKX2-1-204ENST00000522719 IFFO2Q5TF58 517 aa29.53■■■□□ 2.32
NKX2-1-204ENST00000522719 PHF20Q9BVI0 1012 aa29.53■■■□□ 2.32
NKX2-1-204ENST00000522719 GLT8D2Q9H1C3 349 aa29.53■■■□□ 2.32
NKX2-1-204ENST00000522719 RBBP6Q7Z6E9 1792 aaKnown RBP29.52■■■□□ 2.32
NKX2-1-204ENST00000522719 SLC25A27O95847 323 aa29.52■■■□□ 2.32
NKX2-1-204ENST00000522719 ALAS1P13196 640 aa29.52■■■□□ 2.32
NKX2-1-204ENST00000522719 GNA11P29992 359 aa29.52■■■□□ 2.32
NKX2-1-204ENST00000522719 DDIT3P35638 169 aa29.52■■■□□ 2.32
NKX2-1-204ENST00000522719 NLRP5P59047 1200 aa29.52■■■□□ 2.32
NKX2-1-204ENST00000522719 ANKRD13CQ8N6S4 541 aa29.52■■■□□ 2.32
NKX2-1-204ENST00000522719 SHISA4Q96DD7 197 aa29.52■■■□□ 2.32
NKX2-1-204ENST00000522719 C6orf50Q9HD87 102 aa29.52■■■□□ 2.32
NKX2-1-204ENST00000522719 SMCO2A6NFE2 343 aa29.51■■■□□ 2.31
NKX2-1-204ENST00000522719 STX6O43752 255 aa29.51■■■□□ 2.31
NKX2-1-204ENST00000522719 FOSBP53539 338 aa29.51■■■□□ 2.31
NKX2-1-204ENST00000522719 CCNA1P78396 465 aa29.51■■■□□ 2.31
NKX2-1-204ENST00000522719 TRERF1Q96PN7 1200 aa29.51■■■□□ 2.31
NKX2-1-204ENST00000522719 MAF1Q9H063 256 aa29.51■■■□□ 2.31
NKX2-1-204ENST00000522719 GJB4Q9NTQ9 266 aa29.51■■■□□ 2.31
NKX2-1-204ENST00000522719 MMP1P03956 469 aa29.5■■■□□ 2.31
NKX2-1-204ENST00000522719 CRHR2Q13324 411 aa29.5■■■□□ 2.31
NKX2-1-204ENST00000522719 SAMD3Q8N6K7 520 aa29.5■■■□□ 2.31
NKX2-1-204ENST00000522719 CHST13Q8NET6 341 aa29.5■■■□□ 2.31
NKX2-1-204ENST00000522719 CFHR5Q9BXR6 569 aa29.5■■■□□ 2.31
NKX2-1-204ENST00000522719 MOV10L1Q9BXT6 1211 aaKnown RBP29.5■■■□□ 2.31
NKX2-1-204ENST00000522719 KCNJ14Q9UNX9 436 aa29.5■■■□□ 2.31
NKX2-1-204ENST00000522719 RIPK3Q9Y572 518 aa29.5■■■□□ 2.31
NKX2-1-204ENST00000522719 BCRP11274 1271 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 SAFBQ15424 915 aaKnown RBP eCLIP29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 Q3C1V9 767 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 C17orf99Q6UX52 265 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 DAGLBQ8NCG7 672 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 SHCBP1Q8NEM2 672 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 BICD2Q8TD16 824 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 CUL5Q93034 780 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 PSTPIP2Q9H939 334 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 BRMS1Q9HCU9 246 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 RIC8AQ9NPQ8 531 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 RNF146Q9NTX7 359 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 FBXO40Q9UH90 709 aa29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 CIZ1Q9ULV3 898 aaPredicted RBP29.49■■■□□ 2.31
NKX2-1-204ENST00000522719 ADCY7P51828 1080 aa29.48■■■□□ 2.31
NKX2-1-204ENST00000522719 MRPL12P52815 198 aaKnown RBP29.48■■■□□ 2.31
NKX2-1-204ENST00000522719 MCF2L2Q86YR7 1114 aa29.48■■■□□ 2.31
NKX2-1-204ENST00000522719 PCDHA4Q9UN74 947 aa29.48■■■□□ 2.31
NKX2-1-204ENST00000522719 PEX10O60683 326 aa29.47■■■□□ 2.31
NKX2-1-204ENST00000522719 TAL1P17542 331 aaPredicted RBP29.47■■■□□ 2.31
NKX2-1-204ENST00000522719 GUCY1B3Q02153 619 aa29.47■■■□□ 2.31
NKX2-1-204ENST00000522719 CLEC4DQ8WXI8 215 aa29.47■■■□□ 2.31
NKX2-1-204ENST00000522719 MROH8Q9H579 483 aa29.47■■■□□ 2.31
NKX2-1-204ENST00000522719 ACAD9Q9H845 621 aa29.47■■■□□ 2.31
NKX2-1-204ENST00000522719 HOMER2Q9NSB8 354 aa29.47■■■□□ 2.31
NKX2-1-204ENST00000522719 MAP3K20Q9NYL2 800 aaKnown RBP29.47■■■□□ 2.31
NKX2-1-204ENST00000522719 CPA4Q9UI42 421 aa29.47■■■□□ 2.31
NKX2-1-204ENST00000522719 VPS37CA5D8V6 355 aaPredicted RBP29.46■■■□□ 2.31
NKX2-1-204ENST00000522719 OPLAHO14841 1288 aa29.46■■■□□ 2.31
NKX2-1-204ENST00000522719 NPY5RQ15761 445 aa29.46■■■□□ 2.31
NKX2-1-204ENST00000522719 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.46■■■□□ 2.31
NKX2-1-204ENST00000522719 ERCC3P19447 782 aa29.45■■■□□ 2.31
NKX2-1-204ENST00000522719 KRT2P35908 639 aa29.45■■■□□ 2.31
NKX2-1-204ENST00000522719 GHRHRQ02643 423 aa29.45■■■□□ 2.31
NKX2-1-204ENST00000522719 MUM1L1Q5H9M0 696 aa29.45■■■□□ 2.31
NKX2-1-204ENST00000522719 NCAPG2Q86XI2 1143 aa29.45■■■□□ 2.31
NKX2-1-204ENST00000522719 BLIDQ8IZY5 108 aa29.45■■■□□ 2.31
NKX2-1-204ENST00000522719 RNF186Q9NXI6 227 aa29.45■■■□□ 2.31
NKX2-1-204ENST00000522719 MTMR6Q9Y217 621 aa29.45■■■□□ 2.31
NKX2-1-204ENST00000522719 ZNFX1Q9P2E3 1918 aaKnown RBP29.45■■■□□ 2.3
NKX2-1-204ENST00000522719 PIK3CDO00329 1044 aa29.45■■■□□ 2.3
NKX2-1-204ENST00000522719 NUCB2P80303 420 aa29.45■■■□□ 2.3
NKX2-1-204ENST00000522719 NFIBO00712 420 aa29.44■■■□□ 2.3
NKX2-1-204ENST00000522719 MCTP2Q6DN12 878 aa29.44■■■□□ 2.3
NKX2-1-204ENST00000522719 DIS3L2Q8IYB7 885 aaKnown RBP29.44■■■□□ 2.3
NKX2-1-204ENST00000522719 FOXP1Q9H334 677 aaPredicted RBP29.44■■■□□ 2.3
NKX2-1-204ENST00000522719 MAP2K1Q02750 393 aaPredicted RBP29.43■■■□□ 2.3
NKX2-1-204ENST00000522719 CCAR1Q8IX12 1150 aaKnown RBP29.43■■■□□ 2.3
NKX2-1-204ENST00000522719 REXO1Q8N1G1 1221 aaKnown RBP29.43■■■□□ 2.3
NKX2-1-204ENST00000522719 SAGE1Q9NXZ1 904 aa29.43■■■□□ 2.3
NKX2-1-204ENST00000522719 GCOM1H8Y6P7 765 aaPredicted RBP29.42■■■□□ 2.3
NKX2-1-204ENST00000522719 MEIS2O14770 477 aa29.42■■■□□ 2.3
NKX2-1-204ENST00000522719 CFBP00751 764 aa29.42■■■□□ 2.3
NKX2-1-204ENST00000522719 POLR2MP0CAP2 368 aa29.42■■■□□ 2.3
NKX2-1-204ENST00000522719 HSD17B4P51659 736 aa29.42■■■□□ 2.3
NKX2-1-204ENST00000522719 PLXNB2O15031 1838 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 BTBD18B2RXH4 712 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 M0R2N6 131 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 TRPA1O75762 1119 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 BRD1O95696 1058 aa29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 ZSCAN22P10073 491 aaPredicted RBP29.41■■■□□ 2.3
NKX2-1-204ENST00000522719 U2AF2P26368 475 aaKnown RBP eCLIP29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms