RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 OGDHLQ9ULD0 1010 aa20.85■□□□□ 0.93
CLK4-211ENST00000522556 DIS3Q9Y2L1 958 aaKnown RBP20.85■□□□□ 0.93
CLK4-211ENST00000522556 KLRF2D3W0D1 207 aa20.84■□□□□ 0.93
CLK4-211ENST00000522556 CYTH3O43739 400 aa20.84■□□□□ 0.93
CLK4-211ENST00000522556 DHX16O60231 1041 aaKnown RBP20.84■□□□□ 0.93
CLK4-211ENST00000522556 PPP1R11O60927 126 aaPredicted RBP20.84■□□□□ 0.93
CLK4-211ENST00000522556 MCM5P33992 734 aa20.84■□□□□ 0.93
CLK4-211ENST00000522556 SART3Q15020 963 aaKnown RBP20.84■□□□□ 0.93
CLK4-211ENST00000522556 ZNF654Q8IZM8 581 aa20.84■□□□□ 0.93
CLK4-211ENST00000522556 NUP133Q8WUM0 1156 aa20.84■□□□□ 0.93
CLK4-211ENST00000522556 NEK1Q96PY6 1258 aa20.84■□□□□ 0.93
CLK4-211ENST00000522556 DDX20Q9UHI6 824 aaKnown RBP20.84■□□□□ 0.93
CLK4-211ENST00000522556 WDR19Q8NEZ3 1342 aa20.83■□□□□ 0.93
CLK4-211ENST00000522556 ZNF865P0CJ78 1059 aaPredicted RBP20.83■□□□□ 0.93
CLK4-211ENST00000522556 HSPA4P34932 840 aa20.83■□□□□ 0.93
CLK4-211ENST00000522556 RNF20Q5VTR2 975 aa20.83■□□□□ 0.93
CLK4-211ENST00000522556 KCNB2Q92953 911 aa20.83■□□□□ 0.93
CLK4-211ENST00000522556 PAWRQ96IZ0 340 aaKnown RBP20.83■□□□□ 0.93
CLK4-211ENST00000522556 SNX14Q9Y5W7 946 aa20.83■□□□□ 0.93
CLK4-211ENST00000522556 POTEB2H3BUK9 544 aa20.82■□□□□ 0.92
CLK4-211ENST00000522556 ADCY6O43306 1168 aa20.82■□□□□ 0.92
CLK4-211ENST00000522556 EXOSC10Q01780 885 aaKnown RBP20.82■□□□□ 0.92
CLK4-211ENST00000522556 BAATQ14032 418 aaPredicted RBP20.82■□□□□ 0.92
CLK4-211ENST00000522556 TSGA10IPQ3SY00 556 aa20.82■□□□□ 0.92
CLK4-211ENST00000522556 ARMCX2Q7L311 632 aa20.82■□□□□ 0.92
CLK4-211ENST00000522556 TBC1D5Q92609 795 aa20.82■□□□□ 0.92
CLK4-211ENST00000522556 MAMDC4Q6UXC1 1216 aa20.81■□□□□ 0.92
CLK4-211ENST00000522556 CATIPQ7Z7H3 387 aa20.81■□□□□ 0.92
CLK4-211ENST00000522556 CCDC144CPQ8IYA2 1237 aa20.81■□□□□ 0.92
CLK4-211ENST00000522556 MTMR8Q96EF0 704 aa20.81■□□□□ 0.92
CLK4-211ENST00000522556 TMEM87BQ96K49 555 aa20.81■□□□□ 0.92
CLK4-211ENST00000522556 KATNBL1Q9H079 304 aa20.81■□□□□ 0.92
CLK4-211ENST00000522556 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.81■□□□□ 0.92
CLK4-211ENST00000522556 PCDH10Q9P2E7 1040 aa20.81■□□□□ 0.92
CLK4-211ENST00000522556 PFASO15067 1338 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 SYNGAP1Q96PV0 1343 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 PTPDC1A2A3K4 754 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 SEPT4O43236 478 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 PLEKHA8P1O95397 391 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 PTGS1P23219 599 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 NFXL1Q6ZNB6 911 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 ZNF467Q7Z7K2 595 aaPredicted RBP20.8■□□□□ 0.92
CLK4-211ENST00000522556 HOMER1Q86YM7 354 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 CMTR1Q8N1G2 835 aaKnown RBP20.8■□□□□ 0.92
CLK4-211ENST00000522556 PIBF1Q8WXW3 757 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 PIGSQ96S52 555 aa20.8■□□□□ 0.92
CLK4-211ENST00000522556 ZHX1Q9UKY1 873 aaPredicted RBP20.8■□□□□ 0.92
CLK4-211ENST00000522556 OPLAHO14841 1288 aa20.79■□□□□ 0.92
CLK4-211ENST00000522556 DDAH1O94760 285 aa20.79■□□□□ 0.92
CLK4-211ENST00000522556 CALML3P27482 149 aa20.79■□□□□ 0.92
CLK4-211ENST00000522556 IRX5P78411 483 aaPredicted RBP20.79■□□□□ 0.92
CLK4-211ENST00000522556 JAKMIP1Q96N16 626 aaKnown RBP20.79■□□□□ 0.92
CLK4-211ENST00000522556 MTA3Q9BTC8 594 aa20.79■□□□□ 0.92
CLK4-211ENST00000522556 RIOX1Q9H6W3 641 aa20.79■□□□□ 0.92
CLK4-211ENST00000522556 COL20A1Q9P218 1284 aa20.79■□□□□ 0.92
CLK4-211ENST00000522556 BRPF3Q9ULD4 1205 aa20.79■□□□□ 0.92
CLK4-211ENST00000522556 CCDC69A6NI79 296 aa20.78■□□□□ 0.92
CLK4-211ENST00000522556 REC8O95072 547 aa20.78■□□□□ 0.92
CLK4-211ENST00000522556 LIFRP42702 1097 aa20.78■□□□□ 0.92
CLK4-211ENST00000522556 RPS6P62753 249 aaKnown RBP20.78■□□□□ 0.92
CLK4-211ENST00000522556 DHX32Q7L7V1 743 aaKnown RBP20.78■□□□□ 0.92
CLK4-211ENST00000522556 FBXO11Q86XK2 927 aa20.78■□□□□ 0.92
CLK4-211ENST00000522556 TMEM63BQ5T3F8 832 aa20.77■□□□□ 0.92
CLK4-211ENST00000522556 GJC2Q5T442 439 aaPredicted RBP20.77■□□□□ 0.92
CLK4-211ENST00000522556 RNF207Q6ZRF8 634 aa20.77■□□□□ 0.92
CLK4-211ENST00000522556 EEPD1Q7L9B9 569 aa20.77■□□□□ 0.92
CLK4-211ENST00000522556 MICU3Q86XE3 530 aa20.77■□□□□ 0.92
CLK4-211ENST00000522556 MSL3Q8N5Y2 521 aaKnown RBP20.77■□□□□ 0.92
CLK4-211ENST00000522556 ANKLE1Q8NAG6 615 aa20.77■□□□□ 0.92
CLK4-211ENST00000522556 USP26Q9BXU7 913 aa20.77■□□□□ 0.92
CLK4-211ENST00000522556 CNPY2Q9Y2B0 182 aa20.77■□□□□ 0.92
CLK4-211ENST00000522556 ABCB11O95342 1321 aa20.77■□□□□ 0.91
CLK4-211ENST00000522556 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.76■□□□□ 0.91
CLK4-211ENST00000522556 ZBTB5O15062 677 aa20.76■□□□□ 0.91
CLK4-211ENST00000522556 COL6A1P12109 1028 aa20.76■□□□□ 0.91
CLK4-211ENST00000522556 ALDH5A1P51649 535 aaPredicted RBP20.76■□□□□ 0.91
CLK4-211ENST00000522556 ACVR2BQ13705 512 aa20.76■□□□□ 0.91
CLK4-211ENST00000522556 APOA5Q6Q788 366 aa20.76■□□□□ 0.91
CLK4-211ENST00000522556 SGMS1Q86VZ5 419 aa20.76■□□□□ 0.91
CLK4-211ENST00000522556 FBXO16Q8IX29 292 aaPredicted RBP20.76■□□□□ 0.91
CLK4-211ENST00000522556 SRBD1Q8N5C6 995 aaKnown RBP20.76■□□□□ 0.91
CLK4-211ENST00000522556 PDGFCQ9NRA1 345 aa20.76■□□□□ 0.91
CLK4-211ENST00000522556 NRBP1Q9UHY1 535 aa20.76■□□□□ 0.91
CLK4-211ENST00000522556 hCG_1642624A0A1W2PR95 340 aa20.75■□□□□ 0.91
CLK4-211ENST00000522556 MYADML2A6NDP7 307 aa20.75■□□□□ 0.91
CLK4-211ENST00000522556 MSCO60682 206 aa20.75■□□□□ 0.91
CLK4-211ENST00000522556 PGK1P00558 417 aa20.75■□□□□ 0.91
CLK4-211ENST00000522556 MYCNP04198 464 aaPredicted RBP20.75■□□□□ 0.91
CLK4-211ENST00000522556 KRT32Q14532 448 aa20.75■□□□□ 0.91
CLK4-211ENST00000522556 NECAB2Q7Z6G3 386 aa20.75■□□□□ 0.91
CLK4-211ENST00000522556 CTCFLQ8NI51 663 aaPredicted RBP20.75■□□□□ 0.91
CLK4-211ENST00000522556 C11orf49Q9H6J7 331 aa20.75■□□□□ 0.91
CLK4-211ENST00000522556 SLC12A7Q9Y666 1083 aa20.75■□□□□ 0.91
CLK4-211ENST00000522556 AKR1A1P14550 325 aa20.74■□□□□ 0.91
CLK4-211ENST00000522556 CCDC144BQ3MJ40 725 aa20.74■□□□□ 0.91
CLK4-211ENST00000522556 SYTL5Q8TDW5 730 aaPredicted RBP20.74■□□□□ 0.91
CLK4-211ENST00000522556 AMNQ9BXJ7 453 aa20.74■□□□□ 0.91
CLK4-211ENST00000522556 ADCYAP1R1P41586 468 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 LRRC41Q15345 812 aa20.73■□□□□ 0.91
CLK4-211ENST00000522556 Q6ZUG5 572 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms