RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 COPB2P35606 906 aa20.15■□□□□ 0.82
IGHV3-52-201ENST00000519770 CYP4F22Q6NT55 531 aa20.15■□□□□ 0.82
IGHV3-52-201ENST00000519770 BRAPQ7Z569 592 aa20.15■□□□□ 0.82
IGHV3-52-201ENST00000519770 FERMT3Q86UX7 667 aa20.15■□□□□ 0.82
IGHV3-52-201ENST00000519770 BLIDQ8IZY5 108 aa20.15■□□□□ 0.82
IGHV3-52-201ENST00000519770 PAGR1Q9BTK6 254 aa20.15■□□□□ 0.82
IGHV3-52-201ENST00000519770 RABGAP1Q9Y3P9 1069 aa20.15■□□□□ 0.82
IGHV3-52-201ENST00000519770 FAM155AB1AL88 458 aaPredicted RBP20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 ATP2A1O14983 1001 aa20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 STAT3P40763 770 aa20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 PKP1Q13835 747 aa20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 SNRNP48Q6IEG0 339 aaKnown RBP20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 CCAR1Q8IX12 1150 aaKnown RBP20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 DAGLBQ8NCG7 672 aa20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 CAPNS2Q96L46 248 aa20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 AGBL1Q96MI9 1066 aa20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 RIC8AQ9NPQ8 531 aa20.14■□□□□ 0.81
IGHV3-52-201ENST00000519770 CCDC194A0A1B0GVG4 234 aa20.13■□□□□ 0.81
IGHV3-52-201ENST00000519770 CCNA1P78396 465 aa20.13■□□□□ 0.81
IGHV3-52-201ENST00000519770 REXO1Q8N1G1 1221 aaKnown RBP20.13■□□□□ 0.81
IGHV3-52-201ENST00000519770 FAM43AQ8N2R8 423 aa20.13■□□□□ 0.81
IGHV3-52-201ENST00000519770 TRERF1Q96PN7 1200 aa20.13■□□□□ 0.81
IGHV3-52-201ENST00000519770 NOL7Q9UMY1 257 aaKnown RBP20.13■□□□□ 0.81
IGHV3-52-201ENST00000519770 ZNF536O15090 1300 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 BTBD18B2RXH4 712 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 GCOM1H8Y6P7 765 aaPredicted RBP20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 SLC25A27O95847 323 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 ALDH1A1P00352 501 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 POLR2MP0CAP2 368 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 KIF23Q02241 960 aaPredicted RBP20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 TMEM132BQ14DG7 1078 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 TAF1CQ15572 869 aaPredicted RBP20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 KRT25Q7Z3Z0 450 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 IFNL1Q8IU54 200 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 SAMD3Q8N6K7 520 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 EHMT1Q9H9B1 1298 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 HOMER2Q9NSB8 354 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 FBXO40Q9UH90 709 aa20.12■□□□□ 0.81
IGHV3-52-201ENST00000519770 CYP2C8P10632 490 aa20.11■□□□□ 0.81
IGHV3-52-201ENST00000519770 TYW1BQ6NUM6 668 aa20.11■□□□□ 0.81
IGHV3-52-201ENST00000519770 NOSTRINQ8IVI9 506 aa20.11■□□□□ 0.81
IGHV3-52-201ENST00000519770 CHST13Q8NET6 341 aa20.11■□□□□ 0.81
IGHV3-52-201ENST00000519770 REPS2Q8NFH8 660 aa20.11■□□□□ 0.81
IGHV3-52-201ENST00000519770 ZNF396Q96N95 335 aaPredicted RBP20.11■□□□□ 0.81
IGHV3-52-201ENST00000519770 SPATC1LQ9H0A9 340 aa20.11■□□□□ 0.81
IGHV3-52-201ENST00000519770 ZFYVE28Q9HCC9 887 aa20.11■□□□□ 0.81
IGHV3-52-201ENST00000519770 RNF146Q9NTX7 359 aa20.11■□□□□ 0.81
IGHV3-52-201ENST00000519770 SPDYE3A6NKU9 549 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 CFBP00751 764 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 FOSP01100 380 aaPredicted RBP20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 U2AF2P26368 475 aaKnown RBP eCLIP20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 TM4SF4P48230 202 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 RESTQ13127 1097 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 RIOX2Q8IUF8 465 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 GPRC5AQ8NFJ5 357 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 GBP4Q96PP9 640 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 PTPN18Q99952 460 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 MAF1Q9H063 256 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 ACAD9Q9H845 621 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 MAP3K20Q9NYL2 800 aaKnown RBP20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 ZNF214Q9UL59 606 aaPredicted RBP20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 ZDHHC9Q9Y397 364 aa20.1■□□□□ 0.81
IGHV3-52-201ENST00000519770 AP3B2Q13367 1082 aa20.09■□□□□ 0.81
IGHV3-52-201ENST00000519770 NCAPG2Q86XI2 1143 aa20.09■□□□□ 0.81
IGHV3-52-201ENST00000519770 BTBD7Q9P203 1132 aa20.09■□□□□ 0.81
IGHV3-52-201ENST00000519770 BIN2Q9UBW5 565 aaPredicted RBP20.09■□□□□ 0.81
IGHV3-52-201ENST00000519770 PARP14Q460N5 1801 aa20.09■□□□□ 0.81
IGHV3-52-201ENST00000519770 PIK3CDO00329 1044 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 NCLP19338 710 aaKnown RBP20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 ERVK-9P63128 1117 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 ERVK-24P63145 666 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 NR5A1Q13285 461 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 NONOQ15233 471 aaKnown RBP eCLIP20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 JAKMIP3Q5VZ66 844 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 ATL3Q6DD88 541 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 PIK3AP1Q6ZUJ8 805 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 OXER1Q8TDS5 423 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 TNPO1Q92973 898 aaKnown RBP20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 MROH8Q9H579 483 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 RBPJLQ9UBG7 517 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 CFAP45Q9UL16 551 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 PCDHA6Q9UN73 950 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 PCDHA8Q9Y5H6 950 aa20.08■□□□□ 0.81
IGHV3-52-201ENST00000519770 GOLGA6L22H0YM25 854 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 IGF2BP3O00425 579 aaKnown RBP eCLIP20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 MAP2K2P36507 400 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 KRT85P78386 507 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 CSPP1Q1MSJ5 1256 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 FOXD4L6Q3SYB3 417 aaPredicted RBP20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 RILPL1Q5EBL4 403 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 WDR78Q5VTH9 848 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 FOXD4L3Q6VB84 417 aaPredicted RBP20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 NSMFQ6X4W1 530 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 RNF207Q6ZRF8 634 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 ANKRD13CQ8N6S4 541 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 SHISA4Q96DD7 197 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 RLFQ13129 1914 aa20.07■□□□□ 0.8
IGHV3-52-201ENST00000519770 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
IGHV3-52-201ENST00000519770 UBE2SQ16763 222 aa20.06■□□□□ 0.8
IGHV3-52-201ENST00000519770 FCHSD1Q86WN1 690 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms