RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 SMARCE1Q969G3 411 aa11.05□□□□□ -0.64
EFCAB13-203ENST00000517484 CLMNQ96JQ2 1002 aa11.05□□□□□ -0.64
EFCAB13-203ENST00000517484 N4BP2Q86UW6 1770 aaPredicted RBP11.05□□□□□ -0.64
EFCAB13-203ENST00000517484 CUTAO60888 179 aa11.05□□□□□ -0.64
EFCAB13-203ENST00000517484 CMA1P23946 247 aa11.05□□□□□ -0.64
EFCAB13-203ENST00000517484 MSNP26038 577 aaKnown RBP11.05□□□□□ -0.64
EFCAB13-203ENST00000517484 FBXL16Q8N461 479 aa11.05□□□□□ -0.64
EFCAB13-203ENST00000517484 HERC5Q9UII4 1024 aaKnown RBP11.05□□□□□ -0.64
EFCAB13-203ENST00000517484 SCN7AQ01118 1682 aa11.05□□□□□ -0.64
EFCAB13-203ENST00000517484 LETM1O95202 739 aaPredicted RBP11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 SNW1Q13573 536 aaKnown RBP11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 PTPAQ15257 358 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 RPAP3Q9H6T3 665 aaPredicted RBP11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 LRWD1Q9UFC0 647 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 CSADQ9Y600 493 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 CHD4Q14839 1912 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 FMR1NBQ8N0W7 255 aaPredicted RBP11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 CCDC34Q96HJ3 373 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 LZTS2Q9BRK4 669 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 ANO10Q9NW15 660 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 LY75O60449 1722 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 STK36Q9NRP7 1315 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 TESPA1A2RU30 521 aaPredicted RBP11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 SLC37A4O43826 429 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 SNX29Q8TEQ0 813 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 ATG4CQ96DT6 458 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 KIAA1468Q9P260 1216 aa11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 DDX25Q9UHL0 483 aaKnown RBP11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 HOOK1Q9UJC3 728 aaKnown RBP11.04□□□□□ -0.64
EFCAB13-203ENST00000517484 C10orf71Q711Q0 1435 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 ELP1O95163 1332 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 ASIC1P78348 528 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 CHURC1Q8WUH1 139 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 PTPREP23469 700 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 DCAF15Q66K64 600 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 KRT25Q7Z3Z0 450 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 TMOD4Q9NZQ9 345 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 NYAP2Q9P242 653 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 FBXO2Q9UK22 296 aaPredicted RBP11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 A0A087X0B3 334 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 POSTNQ15063 836 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 STX1AQ16623 288 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 KRBA2Q6ZNG9 492 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 LDHDQ86WU2 507 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 FAM200AQ8TCP9 573 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 WNK4Q96J92 1243 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 SPZ1Q9BXG8 430 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 PCDHA12Q9UN75 941 aa11.03□□□□□ -0.64
EFCAB13-203ENST00000517484 FSD2A1L4K1 749 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 NF2P35240 595 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 NPY5RQ15761 445 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 CABP7Q86V35 215 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 CCDC43Q96MW1 224 aaKnown RBP11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 NFIBO00712 420 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 OR52Z1P0C646 297 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 CCT6AP40227 531 aaKnown RBP11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 GOLGA8FQ08AF8 430 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 GOLGA8DPQ0D2H9 430 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 TMEM266Q2M3C6 531 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 NCAPG2Q86XI2 1143 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 PCMTD1Q96MG8 357 aaPredicted RBP11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 SGIP1Q9BQI5 828 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 ANO3Q9BYT9 981 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 VCPKMTQ9H867 229 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 RRAGCQ9HB90 399 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 NRBP1Q9UHY1 535 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 SNED1Q8TER0 1413 aa11.02□□□□□ -0.65
EFCAB13-203ENST00000517484 SFI1A8K8P3 1242 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 LRRC41Q15345 812 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 GRIPAP1Q4V328 841 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 TPH2Q8IWU9 490 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 MTA3Q9BTC8 594 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 NAT10Q9H0A0 1025 aaKnown RBP11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 SRPRBQ9Y5M8 271 aaKnown RBP11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 FZD9O00144 591 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 ATP1A3P13637 1013 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 EPHX2P34913 555 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 CUL4BQ13620 913 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 SUPT20HL1Q3ZLR7 823 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 TATDN1Q6P1N9 297 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 GPC2Q8N158 579 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 IQUBQ8NA54 791 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 CALML4Q96GE6 196 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 CACNA1SQ13698 1873 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 CNTNAP1P78357 1384 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 IBSPP21815 317 aaPredicted RBP11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 PIGOQ8TEQ8 1089 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 SH2D4AQ9H788 454 aa11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.01□□□□□ -0.65
EFCAB13-203ENST00000517484 IL17AQ16552 155 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 KRT79Q5XKE5 535 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 ATL3Q6DD88 541 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 METTL16Q86W50 562 aaKnown RBP11□□□□□ -0.65
EFCAB13-203ENST00000517484 NUDT12Q9BQG2 462 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 EHD4Q9H223 541 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 RIOX1Q9H6W3 641 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 IFNKQ9P0W0 207 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 CCDC39Q9UFE4 941 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms