RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 FANCBQ8NB91 859 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 NUP133Q8WUM0 1156 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 MAF1Q9H063 256 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 CYP39A1Q9NYL5 469 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 SLC12A7Q9Y666 1083 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 PFASO15067 1338 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 ZBTB5O15062 677 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 CYTH3O43739 400 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 DHX16O60231 1041 aaKnown RBP12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 CYBAP13498 195 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 KIF5BP33176 963 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 BAATQ14032 418 aaPredicted RBP12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 BLOC1S2Q6QNY1 142 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 FBXO11Q86XK2 927 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 TRPV1Q8NER1 839 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 CTCFLQ8NI51 663 aaPredicted RBP12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 FGD4Q96M96 766 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 TCEANC2Q96MN5 208 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 JAKMIP1Q96N16 626 aaKnown RBP12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 MYL10Q9BUA6 226 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 NRBP1Q9UHY1 535 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 BRCA2P51587 3418 aa12.97□□□□□ -0.33
SCARNA20-201ENST00000516768 SMCHD1A6NHR9 2005 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 SYNGAP1Q96PV0 1343 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 PNMA6FA0A0J9YX94 578 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 SOWAHBA6NEL2 793 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 NFIBO00712 420 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 EIF5BO60841 1220 aaKnown RBP12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 CPA1P15085 419 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 TAL1P17542 331 aaPredicted RBP12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 CNGA1P29973 690 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 GNAQP50148 359 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 APOA5Q6Q788 366 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 NSMFQ6X4W1 530 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 SHISA4Q96DD7 197 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 LZTS2Q9BRK4 669 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 AMNQ9BXJ7 453 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 OGDHLQ9ULD0 1010 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 BRPF3Q9ULD4 1205 aa12.96□□□□□ -0.33
SCARNA20-201ENST00000516768 ZNF236Q9UL36 1845 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 ABCB11O95342 1321 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 SEPT4O43236 478 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 MSCO60682 206 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 PPP1R11O60927 126 aaPredicted RBP12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 RPS6KB1P23443 525 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 TRAF1Q13077 416 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 USH1GQ495M9 461 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 RNF207Q6ZRF8 634 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 RUFY3Q7L099 469 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 UBE2Q1Q7Z7E8 422 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 SRBD1Q8N5C6 995 aaKnown RBP12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 TBC1D5Q92609 795 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 PIGSQ96S52 555 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 SPZ1Q9BXG8 430 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 AGXT2Q9BYV1 514 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 TM6SF1Q9BZW5 370 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 DDX20Q9UHI6 824 aaKnown RBP12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 CNPY2Q9Y2B0 182 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 MRPL11Q9Y3B7 192 aaKnown RBP12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 PCDHA1Q9Y5I3 950 aa12.95□□□□□ -0.34
SCARNA20-201ENST00000516768 PTPDC1A2A3K4 754 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 ASB14A6NK59 587 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 SEC24BO95487 1268 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 ZNF865P0CJ78 1059 aaPredicted RBP12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 RXRAP19793 462 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 RPS6P62753 249 aaKnown RBP12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 FGD1P98174 961 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 PPP2R5BQ15173 497 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 Q6ZUG5 572 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 MCF2L2Q86YR7 1114 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 CCDC144CPQ8IYA2 1237 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 SAMD3Q8N6K7 520 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 PURBQ96QR8 312 aaKnown RBP12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 ABHD16BQ9H3Z7 469 aa12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
SCARNA20-201ENST00000516768 ASTN1O14525 1302 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 LOC102724159A0A0B4J2E5 919 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 ZBTB43O43298 467 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 CALML3P27482 149 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 RCAN1P53805 252 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 EVCP57679 992 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 ACVR2BQ13705 512 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 PWP2Q15269 919 aaKnown RBP12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 ARMCX2Q7L311 632 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 HOMER1Q86YM7 354 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 DNERQ8NFT8 737 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 MORC4Q8TE76 937 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 BRF1Q92994 677 aa12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 RRP36Q96EU6 259 aaKnown RBP12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 FAM217BQ9NTX9 383 aaPredicted RBP12.93□□□□□ -0.34
SCARNA20-201ENST00000516768 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms