RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 HMGCRP04035 888 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 INHAP05111 366 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 CAPN2P17655 700 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 FGD1P98174 961 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 NBR1Q14596 966 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 MTFR1Q15390 333 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 CCL14Q16627 93 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 ZNF792Q3KQV3 632 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 OLFML2BQ68BL8 750 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 Q6ZUG5 572 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 FBXL16Q8N461 479 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 FANCBQ8NB91 859 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 RGS22Q8NE09 1264 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 CTCFLQ8NI51 663 aaPredicted RBP9.65□□□□□ -0.86
CCL28-204ENST00000514421 TRIB2Q92519 343 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 TMX3Q96JJ7 454 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 TCEANC2Q96MN5 208 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 RNF208Q9H0X6 261 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 RIOX1Q9H6W3 641 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 HOMER2Q9NSB8 354 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 RNF146Q9NTX7 359 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 CYP46A1Q9Y6A2 500 aa9.65□□□□□ -0.86
CCL28-204ENST00000514421 RPTORQ8N122 1335 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 DNAJC25-GNG10A0A024R161 153 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 GABBR2O75899 941 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 MYCP01106 439 aaPredicted RBP9.64□□□□□ -0.87
CCL28-204ENST00000514421 IGHA2P01877 340 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 PGK2P07205 417 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 GJB1P08034 283 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 CCL5P13501 91 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 PRKAR2AP13861 404 aaKnown RBP9.64□□□□□ -0.87
CCL28-204ENST00000514421 CPA1P15085 419 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 CASTP20810 708 aaKnown RBP9.64□□□□□ -0.87
CCL28-204ENST00000514421 RPS6KB1P23443 525 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 TRAF1Q13077 416 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 CDC37Q16543 378 aaPredicted RBP9.64□□□□□ -0.87
CCL28-204ENST00000514421 QRICH1Q2TAL8 776 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 MAP3K21Q5TCX8 1036 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 RUFY3Q7L099 469 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 FBXO11Q86XK2 927 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 MTMR8Q96EF0 704 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 MAML3Q96JK9 1138 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 MAF1Q9H063 256 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 UNC93B1Q9H1C4 597 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 HMX1Q9NP08 348 aaPredicted RBP9.64□□□□□ -0.87
CCL28-204ENST00000514421 FLRT1Q9NZU1 646 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 RLFQ13129 1914 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 MYH4Q9Y623 1939 aa9.64□□□□□ -0.87
CCL28-204ENST00000514421 PNMA6FA0A0J9YX94 578 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 ZBTB5O15062 677 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 ZBTB43O43298 467 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 MCM4P33991 863 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 NUCB2P80303 420 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 CACNB2Q08289 660 aaPredicted RBP9.63□□□□□ -0.87
CCL28-204ENST00000514421 TRIM32Q13049 653 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 PPP2R5BQ15173 497 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 MUM1L1Q5H9M0 696 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 NSMFQ6X4W1 530 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 ZNF467Q7Z7K2 595 aaPredicted RBP9.63□□□□□ -0.87
CCL28-204ENST00000514421 MSL3Q8N5Y2 521 aaKnown RBP9.63□□□□□ -0.87
CCL28-204ENST00000514421 CLEC4DQ8WXI8 215 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 PIGSQ96S52 555 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 TINF2Q9BSI4 451 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 MYL10Q9BUA6 226 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 AMNQ9BXJ7 453 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 AGXT2Q9BYV1 514 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 A1CFQ9NQ94 594 aaKnown RBP9.63□□□□□ -0.87
CCL28-204ENST00000514421 BRPF3Q9ULD4 1205 aa9.63□□□□□ -0.87
CCL28-204ENST00000514421 MRPL11Q9Y3B7 192 aaKnown RBP9.63□□□□□ -0.87
CCL28-204ENST00000514421 PFASO15067 1338 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 ABCB11O95342 1321 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 KLF18A0A0U1RQI7 1052 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 CYTH3O43739 400 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 SGPL1O95470 568 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 HSP90AA1P07900 732 aaKnown RBP9.62□□□□□ -0.87
CCL28-204ENST00000514421 CYP2C19P33261 490 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 RGS19P49795 217 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 RCAN1P53805 252 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 SOX10P56693 466 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 BAATQ14032 418 aaPredicted RBP9.62□□□□□ -0.87
CCL28-204ENST00000514421 SLC35G1Q2M3R5 365 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 USH1GQ495M9 461 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 APOA5Q6Q788 366 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 MAMDC4Q6UXC1 1216 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 RNF207Q6ZRF8 634 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 MCF2L2Q86YR7 1114 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 CCDC144CPQ8IYA2 1237 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 SRBD1Q8N5C6 995 aaKnown RBP9.62□□□□□ -0.87
CCL28-204ENST00000514421 FAM133AQ8N9E0 248 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 TNPO1Q92973 898 aaKnown RBP9.62□□□□□ -0.87
CCL28-204ENST00000514421 BRF1Q92994 677 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 RRP36Q96EU6 259 aaKnown RBP9.62□□□□□ -0.87
CCL28-204ENST00000514421 SPZ1Q9BXG8 430 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 UPF3BQ9BZI7 483 aaKnown RBP9.62□□□□□ -0.87
CCL28-204ENST00000514421 PAK6Q9NQU5 681 aaPredicted RBP9.62□□□□□ -0.87
CCL28-204ENST00000514421 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
CCL28-204ENST00000514421 CYP39A1Q9NYL5 469 aa9.62□□□□□ -0.87
CCL28-204ENST00000514421 NRBP1Q9UHY1 535 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms