RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 PRR12Q9ULL5 1215 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 PTPRFP10586 1907 aa18.33■□□□□ 0.52
TRIM41-206ENST00000514219 NAPAP54920 295 aa18.32■□□□□ 0.52
TRIM41-206ENST00000514219 ATL3Q6DD88 541 aa18.32■□□□□ 0.52
TRIM41-206ENST00000514219 GADL1Q6ZQY3 521 aa18.32■□□□□ 0.52
TRIM41-206ENST00000514219 FBXO11Q86XK2 927 aa18.32■□□□□ 0.52
TRIM41-206ENST00000514219 SAMD3Q8N6K7 520 aa18.32■□□□□ 0.52
TRIM41-206ENST00000514219 KIFC2Q96AC6 838 aa18.32■□□□□ 0.52
TRIM41-206ENST00000514219 GBP4Q96PP9 640 aa18.32■□□□□ 0.52
TRIM41-206ENST00000514219 UBA5Q9GZZ9 404 aa18.32■□□□□ 0.52
TRIM41-206ENST00000514219 JMJD4Q9H9V9 463 aa18.32■□□□□ 0.52
TRIM41-206ENST00000514219 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.32■□□□□ 0.52
TRIM41-206ENST00000514219 ABCB11O95342 1321 aa18.31■□□□□ 0.52
TRIM41-206ENST00000514219 CYTH3O43739 400 aa18.31■□□□□ 0.52
TRIM41-206ENST00000514219 FDPSP14324 419 aaKnown RBP18.31■□□□□ 0.52
TRIM41-206ENST00000514219 NLRP5P59047 1200 aa18.31■□□□□ 0.52
TRIM41-206ENST00000514219 CSPP1Q1MSJ5 1256 aa18.31■□□□□ 0.52
TRIM41-206ENST00000514219 CATSPERGQ6ZRH7 1159 aa18.31■□□□□ 0.52
TRIM41-206ENST00000514219 CCDC84Q86UT8 332 aaPredicted RBP18.31■□□□□ 0.52
TRIM41-206ENST00000514219 CMTR1Q8N1G2 835 aaKnown RBP18.31■□□□□ 0.52
TRIM41-206ENST00000514219 SH3TC2Q8TF17 1288 aa18.31■□□□□ 0.52
TRIM41-206ENST00000514219 NUP88Q99567 741 aaPredicted RBP18.31■□□□□ 0.52
TRIM41-206ENST00000514219 RANBP17Q9H2T7 1088 aaKnown RBP18.31■□□□□ 0.52
TRIM41-206ENST00000514219 FOXP1Q9H334 677 aaPredicted RBP18.31■□□□□ 0.52
TRIM41-206ENST00000514219 VAT1LQ9HCJ6 419 aa18.31■□□□□ 0.52
TRIM41-206ENST00000514219 GOLGA6L22H0YM25 854 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 BRD1O95696 1058 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 MMP1P03956 469 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 KRT2P35908 639 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 SLC16A2P36021 539 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 MRPL12P52815 198 aaKnown RBP18.3■□□□□ 0.52
TRIM41-206ENST00000514219 TKFCQ3LXA3 575 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 CUL5Q93034 780 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 MS4A4AQ96JQ5 239 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 PIGSQ96S52 555 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 MRPL11Q9Y3B7 192 aaKnown RBP18.3■□□□□ 0.52
TRIM41-206ENST00000514219 UNC80Q8N2C7 3258 aa18.3■□□□□ 0.52
TRIM41-206ENST00000514219 ICAM1P05362 532 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 PKN1Q16512 942 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 QRICH1Q2TAL8 776 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 KRT40Q6A162 431 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 MCTP1Q6DN14 999 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 TTBK2Q6IQ55 1244 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 LBX2Q6XYB7 198 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 ANKRD23Q86SG2 305 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 MCF2L2Q86YR7 1114 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 DAGLBQ8NCG7 672 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 DPF3Q92784 378 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 ZMYND12Q9H0C1 365 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 PRO3102Q9H379 93 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 EHMT1Q9H9B1 1298 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 ZFYVE28Q9HCC9 887 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 MAP3K20Q9NYL2 800 aaKnown RBP18.29■□□□□ 0.52
TRIM41-206ENST00000514219 PCDHA1Q9Y5I3 950 aa18.29■□□□□ 0.52
TRIM41-206ENST00000514219 ZSWIM8A7E2V4 1837 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 CCL15-CCL14A0A0B4J2E2 113 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 ATP2A1O14983 1001 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 F13A1P00488 732 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 PTMSP20962 102 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 DSG3P32926 999 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 ADCY7P51828 1080 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 TAF1CQ15572 869 aaPredicted RBP18.28■□□□□ 0.52
TRIM41-206ENST00000514219 CCL15Q16663 113 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 BRI3BPQ8WY22 251 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 ZNF396Q96N95 335 aaPredicted RBP18.28■□□□□ 0.52
TRIM41-206ENST00000514219 PARK7Q99497 189 aaKnown RBP18.28■□□□□ 0.52
TRIM41-206ENST00000514219 PHF20Q9BVI0 1012 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 SLC38A10Q9HBR0 1119 aa18.28■□□□□ 0.52
TRIM41-206ENST00000514219 NOL7Q9UMY1 257 aaKnown RBP18.28■□□□□ 0.52
TRIM41-206ENST00000514219 STXBP3O00186 592 aa18.27■□□□□ 0.52
TRIM41-206ENST00000514219 GCLCP48506 637 aaPredicted RBP18.27■□□□□ 0.52
TRIM41-206ENST00000514219 WWC2Q6AWC2 1192 aa18.27■□□□□ 0.52
TRIM41-206ENST00000514219 REXO1Q8N1G1 1221 aaKnown RBP18.27■□□□□ 0.52
TRIM41-206ENST00000514219 SHISA4Q96DD7 197 aa18.27■□□□□ 0.52
TRIM41-206ENST00000514219 TEX13BQ9BXU2 312 aa18.27■□□□□ 0.52
TRIM41-206ENST00000514219 VPS54Q9P1Q0 977 aa18.27■□□□□ 0.52
TRIM41-206ENST00000514219 FBXO40Q9UH90 709 aa18.27■□□□□ 0.52
TRIM41-206ENST00000514219 CFAP45Q9UL16 551 aa18.27■□□□□ 0.52
TRIM41-206ENST00000514219 PCDHA4Q9UN74 947 aa18.27■□□□□ 0.52
TRIM41-206ENST00000514219 MTMR6Q9Y217 621 aa18.27■□□□□ 0.52
TRIM41-206ENST00000514219 VWA5AO00534 786 aa18.26■□□□□ 0.51
TRIM41-206ENST00000514219 CCNA1P78396 465 aa18.26■□□□□ 0.51
TRIM41-206ENST00000514219 KIAA1755Q5JYT7 1200 aa18.26■□□□□ 0.51
TRIM41-206ENST00000514219 RASGRP2Q7LDG7 609 aa18.26■□□□□ 0.51
TRIM41-206ENST00000514219 KRT25Q7Z3Z0 450 aa18.26■□□□□ 0.51
TRIM41-206ENST00000514219 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
TRIM41-206ENST00000514219 PIBF1Q8WXW3 757 aa18.26■□□□□ 0.51
TRIM41-206ENST00000514219 NAP1L4Q99733 375 aaKnown RBP18.26■□□□□ 0.51
TRIM41-206ENST00000514219 CCPG1Q9ULG6 757 aa18.26■□□□□ 0.51
TRIM41-206ENST00000514219 ADAMTS5Q9UNA0 930 aa18.26■□□□□ 0.51
TRIM41-206ENST00000514219 CCDC194A0A1B0GVG4 234 aa18.25■□□□□ 0.51
TRIM41-206ENST00000514219 SMCO2A6NFE2 343 aa18.25■□□□□ 0.51
TRIM41-206ENST00000514219 BMP15O95972 392 aa18.25■□□□□ 0.51
TRIM41-206ENST00000514219 FOSP01100 380 aaPredicted RBP18.25■□□□□ 0.51
TRIM41-206ENST00000514219 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.513e-7■■■■□ 19.3
TRIM41-206ENST00000514219 TRAPPC10P48553 1259 aa18.25■□□□□ 0.51
TRIM41-206ENST00000514219 AP3B2Q13367 1082 aa18.25■□□□□ 0.51
TRIM41-206ENST00000514219 RILPL1Q5EBL4 403 aa18.25■□□□□ 0.51
TRIM41-206ENST00000514219 NOSTRINQ8IVI9 506 aa18.25■□□□□ 0.51
TRIM41-206ENST00000514219 DIS3L2Q8IYB7 885 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms