RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MYL5Q02045 173 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 AK8Q96MA6 479 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 DACH1Q9UI36 760 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 SMCHD1A6NHR9 2005 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 EDIL3O43854 480 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 AFMP43652 599 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 CDAN1Q8IWY9 1227 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 GSDMAQ96QA5 445 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 HSD3B7Q9H2F3 369 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 PSTPIP2Q9H939 334 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 DISC1Q9NRI5 854 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 TMX2Q9Y320 296 aa16.93■□□□□ 0.3
VCAN-211ENST00000513984 SHTN1A0MZ66 631 aa16.92■□□□□ 0.3
VCAN-211ENST00000513984 UBE2SQ16763 222 aa16.92■□□□□ 0.3
VCAN-211ENST00000513984 SYDE2Q5VT97 1194 aa16.92■□□□□ 0.3
VCAN-211ENST00000513984 NUP88Q99567 741 aaPredicted RBP16.92■□□□□ 0.3
VCAN-211ENST00000513984 PCDHA1Q9Y5I3 950 aa16.92■□□□□ 0.3
VCAN-211ENST00000513984 FZD9O00144 591 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 TNNI2P48788 182 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 KARSQ15046 597 aaKnown RBP16.91■□□□□ 0.3
VCAN-211ENST00000513984 CT47A1Q5JQC4 288 aaPredicted RBP16.91■□□□□ 0.3
VCAN-211ENST00000513984 MTMR9Q96QG7 549 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 TMEM232C9JQI7 657 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 GTPBP6O43824 516 aaPredicted RBP16.91■□□□□ 0.3
VCAN-211ENST00000513984 CDC25AP30304 524 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 CAP2P40123 477 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 UBA7P41226 1012 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 ECE1P42892 770 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 RASSF7Q02833 373 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 PPP4R3AQ6IN85 833 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 DRC7Q8IY82 874 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 DPF2Q92785 391 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 MTRQ99707 1265 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 AMNQ9BXJ7 453 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 TTC12Q9H892 705 aaPredicted RBP16.91■□□□□ 0.3
VCAN-211ENST00000513984 GOPCQ9HD26 462 aa16.91■□□□□ 0.3
VCAN-211ENST00000513984 PP2D1A8MPX8 630 aa16.9■□□□□ 0.3
VCAN-211ENST00000513984 STAT6P42226 847 aa16.9■□□□□ 0.3
VCAN-211ENST00000513984 PRELPP51888 382 aa16.9■□□□□ 0.3
VCAN-211ENST00000513984 TNFAIP1Q13829 316 aa16.9■□□□□ 0.3
VCAN-211ENST00000513984 NAALADL2Q58DX5 795 aa16.9■□□□□ 0.3
VCAN-211ENST00000513984 IGSF22Q8N9C0 903 aa16.9■□□□□ 0.3
VCAN-211ENST00000513984 ACER1Q8TDN7 264 aa16.9■□□□□ 0.3
VCAN-211ENST00000513984 ZNF830Q96NB3 372 aaPredicted RBP16.9■□□□□ 0.3
VCAN-211ENST00000513984 KCNF1Q9H3M0 494 aa16.9■□□□□ 0.3
VCAN-211ENST00000513984 SBF1O95248 1867 aa16.9■□□□□ 0.3
VCAN-211ENST00000513984 MIGA2Q7L4E1 593 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 FBXO11Q86XK2 927 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 DOCK1Q14185 1865 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 SLC37A4O43826 429 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 TDP2O95551 362 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 EGFRP00533 1210 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 GCFC2P16383 781 aaKnown RBP16.89■□□□□ 0.29
VCAN-211ENST00000513984 PTGS1P23219 599 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 ERCC5P28715 1186 aaPredicted RBP16.89■□□□□ 0.29
VCAN-211ENST00000513984 CASP1P29466 404 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 LMOD1P29536 600 aaPredicted RBP16.89■□□□□ 0.29
VCAN-211ENST00000513984 GMPSP49915 693 aaPredicted RBP16.89■□□□□ 0.29
VCAN-211ENST00000513984 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
VCAN-211ENST00000513984 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
VCAN-211ENST00000513984 RASA3Q14644 834 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 CALCRLQ16602 461 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 KIAA1755Q5JYT7 1200 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 RRAGBQ5VZM2 374 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 MCTP2Q6DN12 878 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 CCDC186Q7Z3E2 898 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 ENOX1Q8TC92 643 aaKnown RBP16.89■□□□□ 0.29
VCAN-211ENST00000513984 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.29
VCAN-211ENST00000513984 TEPSINQ96N21 525 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 NAP1L4Q99733 375 aaKnown RBP16.89■□□□□ 0.29
VCAN-211ENST00000513984 CUEDC2Q9H467 287 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 SH2D4AQ9H788 454 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 MAGEF1Q9HAY2 307 aa16.89■□□□□ 0.29
VCAN-211ENST00000513984 PSDA5PKW4 1024 aaPredicted RBP16.88■□□□□ 0.29
VCAN-211ENST00000513984 MYL1P05976 194 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 ASNSP08243 561 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 STAT2P52630 851 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 AP3B2Q13367 1082 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 CABP7Q86V35 215 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 MICALL2Q8IY33 904 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 SPICE1Q8N0Z3 855 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 STAMQ92783 540 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 VCPKMTQ9H867 229 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 NRBP1Q9UHY1 535 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 PRR12Q9ULL5 1215 aa16.88■□□□□ 0.29
VCAN-211ENST00000513984 PHF20L1A8MW92 1017 aa16.87■□□□□ 0.29
VCAN-211ENST00000513984 MEIS2O14770 477 aa16.87■□□□□ 0.29
VCAN-211ENST00000513984 FANCCQ00597 558 aa16.87■□□□□ 0.29
VCAN-211ENST00000513984 FMR1Q06787 632 aaKnown RBP eCLIP16.87■□□□□ 0.29
VCAN-211ENST00000513984 CUL4BQ13620 913 aa16.87■□□□□ 0.29
VCAN-211ENST00000513984 NLGN2Q8NFZ4 835 aa16.87■□□□□ 0.29
VCAN-211ENST00000513984 XPO4Q9C0E2 1151 aaKnown RBP16.87■□□□□ 0.29
VCAN-211ENST00000513984 KBTBD4Q9NVX7 518 aa16.87■□□□□ 0.29
VCAN-211ENST00000513984 IFNKQ9P0W0 207 aa16.87■□□□□ 0.29
VCAN-211ENST00000513984 USP17L15C9J2P7 530 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 USP17L13C9JLJ4 530 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 USP17L11C9JVI0 530 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 USP17L18D6R9N7 530 aa16.86■□□□□ 0.29
VCAN-211ENST00000513984 USP17L22D6RA61 530 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms