RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 PRMT2P55345 433 aa24.34■■□□□ 1.49
NEIL3-202ENST00000513321 SCRN1Q12765 414 aa24.34■■□□□ 1.49
NEIL3-202ENST00000513321 NTRK3Q16288 839 aa24.34■■□□□ 1.49
NEIL3-202ENST00000513321 ABRAQ8N0Z2 381 aa24.34■■□□□ 1.49
NEIL3-202ENST00000513321 MMP19Q99542 508 aa24.34■■□□□ 1.49
NEIL3-202ENST00000513321 PCDHA1Q9Y5I3 950 aa24.34■■□□□ 1.49
NEIL3-202ENST00000513321 CNTNAP5Q8WYK1 1306 aa24.34■■□□□ 1.49
NEIL3-202ENST00000513321 GRB14Q14449 540 aa24.33■■□□□ 1.49
NEIL3-202ENST00000513321 KCTD2Q14681 263 aa24.33■■□□□ 1.49
NEIL3-202ENST00000513321 NECAB1Q8N987 351 aa24.33■■□□□ 1.49
NEIL3-202ENST00000513321 MGAMO43451 1857 aa24.33■■□□□ 1.48
NEIL3-202ENST00000513321 CPLX1O14810 134 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 IFNAR1P17181 557 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 ADORA2AP29274 412 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 TRAF1Q13077 416 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 ANKRD35Q8N283 1001 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 SOCS4Q8WXH5 440 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 CLEC4DQ8WXI8 215 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 USP6NLQ92738 828 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 PTPN22Q9Y2R2 807 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 ABCB11O95342 1321 aa24.32■■□□□ 1.48
NEIL3-202ENST00000513321 PPFIA3O75145 1194 aa24.31■■□□□ 1.48
NEIL3-202ENST00000513321 MAP2K5Q13163 448 aa24.31■■□□□ 1.48
NEIL3-202ENST00000513321 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.31■■□□□ 1.48
NEIL3-202ENST00000513321 PHKBQ93100 1093 aa24.31■■□□□ 1.48
NEIL3-202ENST00000513321 DDX11Q96FC9 970 aa24.31■■□□□ 1.48
NEIL3-202ENST00000513321 MRPL11Q9Y3B7 192 aaKnown RBP24.31■■□□□ 1.48
NEIL3-202ENST00000513321 NFIBO00712 420 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 CYP2B6P20813 491 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 PKN2Q16513 984 aaKnown RBP24.3■■□□□ 1.48
NEIL3-202ENST00000513321 CPLX2Q6PUV4 134 aaKnown RBP24.3■■□□□ 1.48
NEIL3-202ENST00000513321 DPP9Q86TI2 863 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 RAET1EQ8TD07 263 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 ZSCAN31Q96LW9 406 aaPredicted RBP24.3■■□□□ 1.48
NEIL3-202ENST00000513321 DOCK3Q8IZD9 2030 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 PRPF3O43395 683 aaKnown RBP24.3■■□□□ 1.48
NEIL3-202ENST00000513321 COBLO75128 1261 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 PGK2P07205 417 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 RGS2P41220 211 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 NSMFQ6X4W1 530 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 GTF3C6Q969F1 213 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 A1CFQ9NQ94 594 aaKnown RBP24.3■■□□□ 1.48
NEIL3-202ENST00000513321 PTCH2Q9Y6C5 1203 aa24.3■■□□□ 1.48
NEIL3-202ENST00000513321 SMCHD1A6NHR9 2005 aa24.29■■□□□ 1.48
NEIL3-202ENST00000513321 CD2BP2O95400 341 aaKnown RBP24.29■■□□□ 1.48
NEIL3-202ENST00000513321 AKAP17AQ02040 695 aaKnown RBP24.29■■□□□ 1.48
NEIL3-202ENST00000513321 IRF5Q13568 498 aa24.29■■□□□ 1.48
NEIL3-202ENST00000513321 COL13A1Q5TAT6 717 aaPredicted RBP24.29■■□□□ 1.48
NEIL3-202ENST00000513321 SLC26A6Q9BXS9 759 aa24.29■■□□□ 1.48
NEIL3-202ENST00000513321 SSRP1Q08945 709 aaKnown RBP24.28■■□□□ 1.48
NEIL3-202ENST00000513321 FBXO46Q6PJ61 603 aaPredicted RBP24.28■■□□□ 1.48
NEIL3-202ENST00000513321 HEATR3Q7Z4Q2 680 aa24.28■■□□□ 1.48
NEIL3-202ENST00000513321 RNF26Q9BY78 433 aaPredicted RBP24.28■■□□□ 1.48
NEIL3-202ENST00000513321 CYP39A1Q9NYL5 469 aa24.28■■□□□ 1.48
NEIL3-202ENST00000513321 DNAJC25-GNG10A0A024R161 153 aa24.27■■□□□ 1.48
NEIL3-202ENST00000513321 HOXC6P09630 235 aa24.27■■□□□ 1.48
NEIL3-202ENST00000513321 XRCC5P13010 732 aaKnown RBP24.27■■□□□ 1.48
NEIL3-202ENST00000513321 BAATQ14032 418 aaPredicted RBP24.27■■□□□ 1.48
NEIL3-202ENST00000513321 MCF2L2Q86YR7 1114 aa24.27■■□□□ 1.48
NEIL3-202ENST00000513321 RGS22Q8NE09 1264 aa24.27■■□□□ 1.48
NEIL3-202ENST00000513321 NPLOC4Q8TAT6 608 aa24.27■■□□□ 1.48
NEIL3-202ENST00000513321 TBC1D5Q92609 795 aa24.27■■□□□ 1.48
NEIL3-202ENST00000513321 SH2B1Q9NRF2 756 aaPredicted RBP24.27■■□□□ 1.48
NEIL3-202ENST00000513321 SLC5A4Q9NY91 659 aa24.27■■□□□ 1.48
NEIL3-202ENST00000513321 RBM27Q9P2N5 1060 aaKnown RBP24.27■■□□□ 1.48
NEIL3-202ENST00000513321 PFASO15067 1338 aa24.26■■□□□ 1.47
NEIL3-202ENST00000513321 PTPDC1A2A3K4 754 aa24.26■■□□□ 1.47
NEIL3-202ENST00000513321 ADCY3O60266 1144 aa24.26■■□□□ 1.47
NEIL3-202ENST00000513321 CDKL5O76039 1030 aa24.26■■□□□ 1.47
NEIL3-202ENST00000513321 CTDNEP1O95476 244 aa24.26■■□□□ 1.47
NEIL3-202ENST00000513321 MCM2P49736 904 aa24.26■■□□□ 1.47
NEIL3-202ENST00000513321 PFKFB3Q16875 520 aaPredicted RBP24.26■■□□□ 1.47
NEIL3-202ENST00000513321 TRIM22Q8IYM9 498 aa24.26■■□□□ 1.47
NEIL3-202ENST00000513321 GPKOWQ92917 476 aaPredicted RBP eCLIP24.26■■□□□ 1.47
NEIL3-202ENST00000513321 APBA2Q99767 749 aa24.26■■□□□ 1.47
NEIL3-202ENST00000513321 MCOLN1Q9GZU1 580 aa24.26■■□□□ 1.47
NEIL3-202ENST00000513321 POTEB2H3BUK9 544 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 OPLAHO14841 1288 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 DTNBO60941 627 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 SCG2P13521 617 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 PKN1Q16512 942 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 ZNF792Q3KQV3 632 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 WWC2Q6AWC2 1192 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 RNF207Q6ZRF8 634 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 PLXNB2O15031 1838 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 ELNP15502 786 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 RPS6P62753 249 aaKnown RBP24.25■■□□□ 1.47
NEIL3-202ENST00000513321 CNTN2Q02246 1040 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 ST3GAL1Q11201 340 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 CCL14Q16627 93 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 CCDC83Q8IWF9 413 aa24.25■■□□□ 1.47
NEIL3-202ENST00000513321 MYH6P13533 1939 aa24.24■■□□□ 1.47
NEIL3-202ENST00000513321 CFBP00751 764 aa24.24■■□□□ 1.47
NEIL3-202ENST00000513321 CALML3P27482 149 aa24.24■■□□□ 1.47
NEIL3-202ENST00000513321 SLC30A10Q6XR72 485 aa24.24■■□□□ 1.47
NEIL3-202ENST00000513321 FAM133AQ8N9E0 248 aa24.24■■□□□ 1.47
NEIL3-202ENST00000513321 PXYLP1Q8TE99 480 aa24.24■■□□□ 1.47
NEIL3-202ENST00000513321 MAF1Q9H063 256 aa24.24■■□□□ 1.47
NEIL3-202ENST00000513321 DIS3Q9Y2L1 958 aaKnown RBP24.24■■□□□ 1.47
NEIL3-202ENST00000513321 GRK4P32298 578 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms