RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RBPJLQ9UBG7 517 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 CCPG1Q9ULG6 757 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 RABGAP1Q9Y3P9 1069 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 THSD7BQ9C0I4 1608 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 ABCB11O95342 1321 aa14.43□□□□□ -0.1
PDPN-210ENST00000513143 ESYT2A0FGR8 921 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 STX6O43752 255 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 STAT3P40763 770 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 FOSBP53539 338 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 NAPAP54920 295 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 USH1GQ495M9 461 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 CCDC148Q8NFR7 591 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 SMCR8Q8TEV9 937 aaPredicted RBP14.42□□□□□ -0.1
PDPN-210ENST00000513143 TEX13BQ9BXU2 312 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 ZMYND12Q9H0C1 365 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 TXNRD2Q9NNW7 524 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 ADGRA2Q96PE1 1338 aa14.42□□□□□ -0.1
PDPN-210ENST00000513143 H3BQV1 296 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 MMP1P03956 469 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 TAL1P17542 331 aaPredicted RBP14.41□□□□□ -0.1
PDPN-210ENST00000513143 CALML3P27482 149 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 GUCY1B3Q02153 619 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 TAF1CQ15572 869 aaPredicted RBP14.41□□□□□ -0.1
PDPN-210ENST00000513143 NPY5RQ15761 445 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 TKFCQ3LXA3 575 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 IFFO2Q5TF58 517 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 SNRNP48Q6IEG0 339 aaKnown RBP14.41□□□□□ -0.1
PDPN-210ENST00000513143 GALNT17Q6IS24 598 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 PAGR1Q9BTK6 254 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 SPATC1LQ9H0A9 340 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 CIZ1Q9ULV3 898 aaPredicted RBP14.41□□□□□ -0.1
PDPN-210ENST00000513143 KCNJ14Q9UNX9 436 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 MTMR6Q9Y217 621 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 MRPL11Q9Y3B7 192 aaKnown RBP14.41□□□□□ -0.1
PDPN-210ENST00000513143 SMCO2A6NFE2 343 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 OPLAHO14841 1288 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 PEX10O60683 326 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 ALDH1A1P00352 501 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 ALAS1P13196 640 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 NLRP5P59047 1200 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 PKP1Q13835 747 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 Q3C1V9 767 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 RIOX2Q8IUF8 465 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 DAGLBQ8NCG7 672 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 CLEC4DQ8WXI8 215 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 PSTPIP2Q9H939 334 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 C6orf50Q9HD87 102 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 MORF4L1Q9UBU8 362 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 RIPK3Q9Y572 518 aa14.41□□□□□ -0.1
PDPN-210ENST00000513143 RBBP6Q7Z6E9 1792 aaKnown RBP14.4□□□□□ -0.1
PDPN-210ENST00000513143 VPS37CA5D8V6 355 aaPredicted RBP14.4□□□□□ -0.1
PDPN-210ENST00000513143 CA12O43570 354 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 BRD1O95696 1058 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 GNA11P29992 359 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 ADCY7P51828 1080 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 ERVK-9P63128 1117 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 ERVK-24P63145 666 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 NUCB2P80303 420 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 PLS1Q14651 629 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 TEX2Q8IWB9 1127 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 GPRC5AQ8NFJ5 357 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 TRERF1Q96PN7 1200 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 MOV10L1Q9BXT6 1211 aaKnown RBP14.4□□□□□ -0.1
PDPN-210ENST00000513143 GLT8D2Q9H1C3 349 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 ZFYVE28Q9HCC9 887 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 RIC8AQ9NPQ8 531 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 CHMP5Q9NZZ3 219 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 PCDHA4Q9UN74 947 aa14.4□□□□□ -0.1
PDPN-210ENST00000513143 M0R2N6 131 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 ADAMTS3O15072 1205 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 TLR2O60603 784 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 SLC25A27O95847 323 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 BCRP11274 1271 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 COPB2P35606 906 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 MRPL12P52815 198 aaKnown RBP14.39□□□□□ -0.11
PDPN-210ENST00000513143 GHRHRQ02643 423 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 CRHR2Q13324 411 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 SAFBQ15424 915 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDPN-210ENST00000513143 FAM110CQ1W6H9 321 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 MUM1L1Q5H9M0 696 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 C17orf99Q6UX52 265 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 DIS3L2Q8IYB7 885 aaKnown RBP14.39□□□□□ -0.11
PDPN-210ENST00000513143 BLIDQ8IZY5 108 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 SAMD3Q8N6K7 520 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 ANKRD13CQ8N6S4 541 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 SHCBP1Q8NEM2 672 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 CHST13Q8NET6 341 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 BICD2Q8TD16 824 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 CUL5Q93034 780 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 BRMS1Q9HCU9 246 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 RNF146Q9NTX7 359 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 ZDHHC9Q9Y397 364 aa14.39□□□□□ -0.11
PDPN-210ENST00000513143 ZNFX1Q9P2E3 1918 aaKnown RBP14.38□□□□□ -0.11
PDPN-210ENST00000513143 BTBD18B2RXH4 712 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 PIK3CDO00329 1044 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 NFIBO00712 420 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 MEIS2O14770 477 aa14.38□□□□□ -0.11
PDPN-210ENST00000513143 ZSCAN22P10073 491 aaPredicted RBP14.38□□□□□ -0.11
PDPN-210ENST00000513143 U2AF2P26368 475 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDPN-210ENST00000513143 KRT2P35908 639 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms