RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 HOMER1Q86YM7 354 aa14.8□□□□□ -0.04
CDK7-209ENST00000512985 SAMD3Q8N6K7 520 aa14.8□□□□□ -0.04
CDK7-209ENST00000512985 SH3TC2Q8TF17 1288 aa14.8□□□□□ -0.04
CDK7-209ENST00000512985 AGXT2Q9BYV1 514 aa14.8□□□□□ -0.04
CDK7-209ENST00000512985 RBM27Q9P2N5 1060 aaKnown RBP14.8□□□□□ -0.04
CDK7-209ENST00000512985 POTEB2H3BUK9 544 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 INHAP05111 366 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 CPA1P15085 419 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 ELNP15502 786 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 APOBRQ0VD83 1088 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 USH1GQ495M9 461 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 CPLX2Q6PUV4 134 aaKnown RBP14.79□□□□□ -0.04
CDK7-209ENST00000512985 NSMFQ6X4W1 530 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 CCDC144CPQ8IYA2 1237 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 RGS22Q8NE09 1264 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 MTMR8Q96EF0 704 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 IL17RAQ96F46 866 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 ZNF333Q96JL9 665 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 C22orf23Q9BZE7 217 aa14.79□□□□□ -0.04
CDK7-209ENST00000512985 UPF3BQ9BZI7 483 aaKnown RBP14.79□□□□□ -0.04
CDK7-209ENST00000512985 ALDH8A1Q9H2A2 487 aaPredicted RBP14.79□□□□□ -0.04
CDK7-209ENST00000512985 MAP3K20Q9NYL2 800 aaKnown RBP14.79□□□□□ -0.04
CDK7-209ENST00000512985 ADD3Q9UEY8 706 aaKnown RBP14.79□□□□□ -0.04
CDK7-209ENST00000512985 LOC102724159A0A0B4J2E5 919 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 PTPDC1A2A3K4 754 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 SEC24BO95487 1268 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 RXRAP19793 462 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 AKAP17AQ02040 695 aaKnown RBP14.78□□□□□ -0.04
CDK7-209ENST00000512985 PWP2Q15269 919 aaKnown RBP14.78□□□□□ -0.04
CDK7-209ENST00000512985 TMTC3Q6ZXV5 915 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 ZNF467Q7Z7K2 595 aaPredicted RBP14.78□□□□□ -0.04
CDK7-209ENST00000512985 TRIB2Q92519 343 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 ZNF274Q96GC6 653 aaPredicted RBP14.78□□□□□ -0.04
CDK7-209ENST00000512985 CPVLQ9H3G5 476 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 HMX1Q9NP08 348 aaPredicted RBP14.78□□□□□ -0.04
CDK7-209ENST00000512985 A1CFQ9NQ94 594 aaKnown RBP14.78□□□□□ -0.04
CDK7-209ENST00000512985 NRBP1Q9UHY1 535 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 BRPF3Q9ULD4 1205 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 PCDHA1Q9Y5I3 950 aa14.78□□□□□ -0.04
CDK7-209ENST00000512985 RPTORQ8N122 1335 aa14.77□□□□□ -0.04
CDK7-209ENST00000512985 ASB14A6NK59 587 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 COBLO75128 1261 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 PGK2P07205 417 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 EVCP57679 992 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 ZNF792Q3KQV3 632 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 RNF207Q6ZRF8 634 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 MAML3Q96JK9 1138 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 PIGSQ96S52 555 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 RNF208Q9H0X6 261 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 CYP39A1Q9NYL5 469 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 CNPY2Q9Y2B0 182 aa14.77□□□□□ -0.05
CDK7-209ENST00000512985 NID2Q14112 1375 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 SYNGAP1Q96PV0 1343 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 DNAJC25-GNG10A0A024R161 153 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 hCG_1984214I3L0E3 225 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 CPLX1O14810 134 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 MSCO60682 206 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
CDK7-209ENST00000512985 RBM25P49756 843 aaKnown RBP14.76□□□□□ -0.05
CDK7-209ENST00000512985 NEK4P51957 841 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 COL9A3Q14050 684 aaPredicted RBP14.76□□□□□ -0.05
CDK7-209ENST00000512985 MUM1L1Q5H9M0 696 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 TEX2Q8IWB9 1127 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 SRBD1Q8N5C6 995 aaKnown RBP14.76□□□□□ -0.05
CDK7-209ENST00000512985 ZNF713Q8N859 430 aaPredicted RBP14.76□□□□□ -0.05
CDK7-209ENST00000512985 NPLOC4Q8TAT6 608 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 TINF2Q9BSI4 451 aa14.76□□□□□ -0.05
CDK7-209ENST00000512985 CYTH3O43739 400 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 CDKL5O76039 1030 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 PLEKHA8P1O95397 391 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 CCL5P13501 91 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 TOB2Q14106 344 aaPredicted RBP14.75□□□□□ -0.05
CDK7-209ENST00000512985 CCL14Q16627 93 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 RAB11FIP4Q86YS3 637 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 TRIM22Q8IYM9 498 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 CCDC82Q8N4S0 544 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 DNERQ8NFT8 737 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 CUL5Q93034 780 aa14.75□□□□□ -0.05
CDK7-209ENST00000512985 NFIBO00712 420 aa14.74□□□□□ -0.05
CDK7-209ENST00000512985 CALML3P27482 149 aa14.74□□□□□ -0.05
CDK7-209ENST00000512985 PDIA3P30101 505 aaKnown RBP14.74□□□□□ -0.05
CDK7-209ENST00000512985 CACNB2Q08289 660 aaPredicted RBP14.74□□□□□ -0.05
CDK7-209ENST00000512985 BAATQ14032 418 aaPredicted RBP14.74□□□□□ -0.05
CDK7-209ENST00000512985 MAP3K21Q5TCX8 1036 aa14.74□□□□□ -0.05
CDK7-209ENST00000512985 MAMDC4Q6UXC1 1216 aa14.74□□□□□ -0.05
CDK7-209ENST00000512985 FAM133AQ8N9E0 248 aa14.74□□□□□ -0.05
CDK7-209ENST00000512985 CCDC12Q8WUD4 166 aaPredicted RBP14.74□□□□□ -0.05
CDK7-209ENST00000512985 CLEC4DQ8WXI8 215 aa14.74□□□□□ -0.05
CDK7-209ENST00000512985 PIBF1Q8WXW3 757 aa14.74□□□□□ -0.05
CDK7-209ENST00000512985 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.74□□□□□ -0.05
CDK7-209ENST00000512985 GLT8D2Q9H1C3 349 aa14.74□□□□□ -0.05
CDK7-209ENST00000512985 SLKQ9H2G2 1235 aaPredicted RBP14.74□□□□□ -0.05
CDK7-209ENST00000512985 DOCK3Q8IZD9 2030 aa14.73□□□□□ -0.05
CDK7-209ENST00000512985 GCOM1H8Y6P7 765 aaPredicted RBP14.73□□□□□ -0.05
CDK7-209ENST00000512985 ST18O60284 1047 aa14.73□□□□□ -0.05
CDK7-209ENST00000512985 CFBP00751 764 aa14.73□□□□□ -0.05
CDK7-209ENST00000512985 MYCP01106 439 aaPredicted RBP14.73□□□□□ -0.05
CDK7-209ENST00000512985 GJB1P08034 283 aa14.73□□□□□ -0.05
CDK7-209ENST00000512985 POLR2MP0CAP2 368 aa14.73□□□□□ -0.05
CDK7-209ENST00000512985 CNGA1P29973 690 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms